RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
GPNMB-206ENST00000465673 BRCA2P51587 3418 aa13.1□□□□□ -0.31
GPNMB-206ENST00000465673 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 CCL15-CCL14A0A0B4J2E2 113 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
GPNMB-206ENST00000465673 HIBADHP31937 336 aaKnown RBP13.09□□□□□ -0.31
GPNMB-206ENST00000465673 CRKP46108 304 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 VGLL4Q14135 290 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 CCL15Q16663 113 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 GCC1Q96CN9 775 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 PTCH2Q9Y6C5 1203 aa13.09□□□□□ -0.31
GPNMB-206ENST00000465673 LAMB1P07942 1786 aa13.08□□□□□ -0.32
GPNMB-206ENST00000465673 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
GPNMB-206ENST00000465673 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
GPNMB-206ENST00000465673 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
GPNMB-206ENST00000465673 SLC4A10Q6U841 1118 aa13.08□□□□□ -0.32
GPNMB-206ENST00000465673 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
GPNMB-206ENST00000465673 SUCLG2Q96I99 432 aa13.08□□□□□ -0.32
GPNMB-206ENST00000465673 ARHGAP39Q9C0H5 1083 aa13.08□□□□□ -0.32
GPNMB-206ENST00000465673 SERPINA10Q9UK55 444 aa13.08□□□□□ -0.32
GPNMB-206ENST00000465673 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
GPNMB-206ENST00000465673 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.07□□□□□ -0.32
GPNMB-206ENST00000465673 ZNF333Q96JL9 665 aa13.07□□□□□ -0.32
GPNMB-206ENST00000465673 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
GPNMB-206ENST00000465673 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
GPNMB-206ENST00000465673 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
GPNMB-206ENST00000465673 LRRC24Q50LG9 513 aa13.06□□□□□ -0.32
GPNMB-206ENST00000465673 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
GPNMB-206ENST00000465673 ZKSCAN4Q969J2 545 aaPredicted RBP13.06□□□□□ -0.32
GPNMB-206ENST00000465673 TMEM106CQ9BVX2 250 aa13.06□□□□□ -0.32
GPNMB-206ENST00000465673 ZFYVE28Q9HCC9 887 aa13.06□□□□□ -0.32
GPNMB-206ENST00000465673 RIPOR2Q9Y4F9 1068 aa13.06□□□□□ -0.32
GPNMB-206ENST00000465673 ZSWIM8A7E2V4 1837 aa13.06□□□□□ -0.32
GPNMB-206ENST00000465673 FXR1P51114 621 aaKnown RBP eCLIP13.05□□□□□ -0.32
GPNMB-206ENST00000465673 GTF2A2P52657 109 aa13.05□□□□□ -0.32
GPNMB-206ENST00000465673 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
GPNMB-206ENST00000465673 FBXO33Q7Z6M2 555 aa13.05□□□□□ -0.32
GPNMB-206ENST00000465673 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
GPNMB-206ENST00000465673 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
GPNMB-206ENST00000465673 CSADQ9Y600 493 aa13.05□□□□□ -0.32
GPNMB-206ENST00000465673 SNCAIPQ9Y6H5 919 aa13.05□□□□□ -0.32
GPNMB-206ENST00000465673 RBBP6Q7Z6E9 1792 aaKnown RBP13.04□□□□□ -0.32
GPNMB-206ENST00000465673 BTBD19C9JJ37 291 aa13.04□□□□□ -0.32
GPNMB-206ENST00000465673 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
GPNMB-206ENST00000465673 KLHDC4Q8TBB5 520 aa13.04□□□□□ -0.32
GPNMB-206ENST00000465673 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
GPNMB-206ENST00000465673 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 IRF6O14896 467 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 ALDH1L1O75891 902 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 CTGFP29279 349 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 TNNI2P48788 182 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 BCAMP50895 628 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 BICC1Q9H694 974 aaKnown RBP13.03□□□□□ -0.32
GPNMB-206ENST00000465673 CACNA1FO60840 1977 aa13.03□□□□□ -0.32
GPNMB-206ENST00000465673 TLR2O60603 784 aa13.02□□□□□ -0.33
GPNMB-206ENST00000465673 FRAT2O75474 233 aaPredicted RBP13.02□□□□□ -0.33
GPNMB-206ENST00000465673 METTL24Q5JXM2 366 aa13.02□□□□□ -0.33
GPNMB-206ENST00000465673 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.33
GPNMB-206ENST00000465673 NBPF11Q86T75 865 aa13.02□□□□□ -0.33
GPNMB-206ENST00000465673 ANKRD44Q8N8A2 993 aa13.02□□□□□ -0.33
GPNMB-206ENST00000465673 TEKT1Q969V4 418 aa13.02□□□□□ -0.33
GPNMB-206ENST00000465673 CEP290O15078 2479 aa13.02□□□□□ -0.33
GPNMB-206ENST00000465673 ARAP2Q8WZ64 1704 aa13.02□□□□□ -0.33
GPNMB-206ENST00000465673 H0YGN5 161 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 CETPP11597 493 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 INPP5BP32019 993 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 LACTBP83111 547 aaPredicted RBP13.01□□□□□ -0.33
GPNMB-206ENST00000465673 MTFR1Q15390 333 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
GPNMB-206ENST00000465673 ERO1BQ86YB8 467 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 VGLL2Q8N8G2 317 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 CPA4Q9UI42 421 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 MROH5Q6ZUA9 1318 aa13.01□□□□□ -0.33
GPNMB-206ENST00000465673 HDLBPQ00341 1268 aaKnown RBP13□□□□□ -0.33
GPNMB-206ENST00000465673 GOLGA6L2Q8N9W4 650 aaPredicted RBP13□□□□□ -0.33
GPNMB-206ENST00000465673 ZDHHC15Q96MV8 337 aa13□□□□□ -0.33
GPNMB-206ENST00000465673 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
GPNMB-206ENST00000465673 UTYO14607 1347 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 PDE8BO95263 885 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 TCP10Q12799 353 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 PPIL2Q13356 520 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 SNAPC2Q13487 334 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 ARHGEF6Q15052 776 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-206ENST00000465673 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 C17orf99Q6UX52 265 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
GPNMB-206ENST00000465673 KIF22Q14807 665 aa12.98□□□□□ -0.33
GPNMB-206ENST00000465673 FAM83AQ86UY5 434 aa12.98□□□□□ -0.33
GPNMB-206ENST00000465673 SHISA4Q96DD7 197 aa12.98□□□□□ -0.33
GPNMB-206ENST00000465673 TRIM47Q96LD4 638 aa12.98□□□□□ -0.33
GPNMB-206ENST00000465673 TMOD2Q9NZR1 351 aa12.98□□□□□ -0.33
GPNMB-206ENST00000465673 PDHXO00330 501 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms