RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CCDC129Q6ZRS4 1044 aa20.77■□□□□ 0.91
PTPRU-206ENST00000465525 ZNF384Q8TF68 577 aa20.77■□□□□ 0.91
PTPRU-206ENST00000465525 MYH2Q9UKX2 1941 aa20.76■□□□□ 0.91
PTPRU-206ENST00000465525 ADAMTSL1Q8N6G6 1762 aa20.76■□□□□ 0.91
PTPRU-206ENST00000465525 MECOMQ03112 1051 aa20.76■□□□□ 0.91
PTPRU-206ENST00000465525 CXCL9Q07325 125 aa20.76■□□□□ 0.91
PTPRU-206ENST00000465525 ZMYM1Q5SVZ6 1142 aa20.76■□□□□ 0.91
PTPRU-206ENST00000465525 TCRBV5S4A2TA0A5A2 114 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 F8W031 263 aaPredicted RBP20.75■□□□□ 0.91
PTPRU-206ENST00000465525 M0R2C6 588 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 TNIP1Q15025 636 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 DACT2Q5SW24 774 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 SPTY2D1Q68D10 685 aaPredicted RBP20.75■□□□□ 0.91
PTPRU-206ENST00000465525 CIAPIN1Q6FI81 312 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 ZSCAN25Q6NSZ9 544 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 DZIP1Q86YF9 867 aaKnown RBP20.75■□□□□ 0.91
PTPRU-206ENST00000465525 ZGPATQ8N5A5 531 aaKnown RBP20.75■□□□□ 0.91
PTPRU-206ENST00000465525 TBC1D22AQ8WUA7 517 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 OSBP2Q969R2 916 aa20.75■□□□□ 0.91
PTPRU-206ENST00000465525 ZFYP08048 801 aaPredicted RBP20.74■□□□□ 0.91
PTPRU-206ENST00000465525 CYP7A1P22680 504 aa20.74■□□□□ 0.91
PTPRU-206ENST00000465525 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
PTPRU-206ENST00000465525 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
PTPRU-206ENST00000465525 ZNF589Q86UQ0 364 aaPredicted RBP20.74■□□□□ 0.91
PTPRU-206ENST00000465525 MAST3O60307 1309 aa20.74■□□□□ 0.91
PTPRU-206ENST00000465525 ZC3H4Q9UPT8 1303 aaKnown RBP20.74■□□□□ 0.91
PTPRU-206ENST00000465525 SGSM2O43147 1006 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 VIL1P09327 827 aaKnown RBP20.73■□□□□ 0.91
PTPRU-206ENST00000465525 FKBP1AP62942 108 aaKnown RBP20.73■□□□□ 0.91
PTPRU-206ENST00000465525 DIXDC1Q155Q3 683 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 NAA16Q6N069 864 aaPredicted RBP20.73■□□□□ 0.91
PTPRU-206ENST00000465525 RUFY2Q8WXA3 655 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 APPBP2Q92624 585 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 NSUN4Q96CB9 384 aaKnown RBP20.73■□□□□ 0.91
PTPRU-206ENST00000465525 PUS7LQ9H0K6 701 aaKnown RBP20.73■□□□□ 0.91
PTPRU-206ENST00000465525 PSMD14O00487 310 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 UBE3CQ15386 1083 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 MIGA1Q8NAN2 632 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
PTPRU-206ENST00000465525 MCMDC2Q4G0Z9 681 aa20.72■□□□□ 0.91
PTPRU-206ENST00000465525 RSBN1LQ6PCB5 846 aaPredicted RBP20.71■□□□□ 0.91
PTPRU-206ENST00000465525 KIAA0825Q8IV33 1275 aa20.71■□□□□ 0.91
PTPRU-206ENST00000465525 HELLSQ9NRZ9 838 aa20.71■□□□□ 0.91
PTPRU-206ENST00000465525 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
PTPRU-206ENST00000465525 SCNN1DP51172 638 aa20.7■□□□□ 0.91
PTPRU-206ENST00000465525 ANO2Q9NQ90 1003 aa20.7■□□□□ 0.91
PTPRU-206ENST00000465525 TTF2Q9UNY4 1162 aaKnown RBP20.7■□□□□ 0.91
PTPRU-206ENST00000465525 SUGT1Q9Y2Z0 365 aa20.7■□□□□ 0.91
PTPRU-206ENST00000465525 ZNF541Q9H0D2 1346 aa20.7■□□□□ 0.9
PTPRU-206ENST00000465525 IGSF3O75054 1194 aa20.7■□□□□ 0.9
PTPRU-206ENST00000465525 DPY19L2Q6NUT2 758 aa20.7■□□□□ 0.9
PTPRU-206ENST00000465525 GPC2Q8N158 579 aa20.7■□□□□ 0.9
PTPRU-206ENST00000465525 ZBTB12Q9Y330 459 aaPredicted RBP20.7■□□□□ 0.9
PTPRU-206ENST00000465525 CCDC171Q6TFL3 1326 aa20.69■□□□□ 0.9
PTPRU-206ENST00000465525 RAD50Q92878 1312 aa20.69■□□□□ 0.9
PTPRU-206ENST00000465525 MBD4O95243 580 aa20.69■□□□□ 0.9
PTPRU-206ENST00000465525 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
PTPRU-206ENST00000465525 TICAM2Q86XR7 235 aa20.69■□□□□ 0.9
PTPRU-206ENST00000465525 AGBL3Q8NEM8 1001 aa20.69■□□□□ 0.9
PTPRU-206ENST00000465525 ARMT1Q9H993 441 aa20.69■□□□□ 0.9
PTPRU-206ENST00000465525 GJA3Q9Y6H8 435 aa20.69■□□□□ 0.9
PTPRU-206ENST00000465525 PTH1RQ03431 593 aa20.68■□□□□ 0.9
PTPRU-206ENST00000465525 GPAA1O43292 621 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 RPS12P25398 132 aaKnown RBP20.67■□□□□ 0.9
PTPRU-206ENST00000465525 VPS53Q5VIR6 699 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 LCORLQ8N3X6 602 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 AIDAQ96BJ3 306 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 GMLQ99445 158 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 MAGEB6P1A0A0J9YX57 407 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 REC8O95072 547 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 GSTO1P78417 241 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
PTPRU-206ENST00000465525 LSG1Q9H089 658 aaKnown RBP20.67■□□□□ 0.9
PTPRU-206ENST00000465525 AATFQ9NY61 560 aaKnown RBP eCLIP20.67■□□□□ 0.9
PTPRU-206ENST00000465525 DPF2Q92785 391 aa20.66■□□□□ 0.9
PTPRU-206ENST00000465525 PCDHAC2Q9Y5I4 1007 aa20.66■□□□□ 0.9
PTPRU-206ENST00000465525 MROH7-TTC4A0A0A0MT08 1334 aa20.66■□□□□ 0.9
PTPRU-206ENST00000465525 CDK5RAP2Q96SN8 1893 aa20.65■□□□□ 0.9
PTPRU-206ENST00000465525 GLTPD2A6NH11 291 aa20.65■□□□□ 0.9
PTPRU-206ENST00000465525 DDNO94850 711 aaPredicted RBP20.65■□□□□ 0.9
PTPRU-206ENST00000465525 MMP14P50281 582 aa20.65■□□□□ 0.9
PTPRU-206ENST00000465525 PRKAB2O43741 272 aa20.64■□□□□ 0.9
PTPRU-206ENST00000465525 LDHCP07864 332 aa20.64■□□□□ 0.9
PTPRU-206ENST00000465525 GMPSP49915 693 aaPredicted RBP20.64■□□□□ 0.9
PTPRU-206ENST00000465525 TMED8Q6PL24 325 aaPredicted RBP20.64■□□□□ 0.9
PTPRU-206ENST00000465525 STRBPQ96SI9 672 aaKnown RBP20.64■□□□□ 0.9
PTPRU-206ENST00000465525 RIOK1Q9BRS2 568 aaKnown RBP20.64■□□□□ 0.9
PTPRU-206ENST00000465525 USP26Q9BXU7 913 aa20.64■□□□□ 0.9
PTPRU-206ENST00000465525 DAGLAQ9Y4D2 1042 aa20.64■□□□□ 0.9
PTPRU-206ENST00000465525 SHTN1A0MZ66 631 aa20.64■□□□□ 0.89
PTPRU-206ENST00000465525 USP17L8P0C7I0 530 aa20.64■□□□□ 0.89
PTPRU-206ENST00000465525 BTDP43251 543 aa20.64■□□□□ 0.89
PTPRU-206ENST00000465525 OGFOD1Q8N543 542 aa20.64■□□□□ 0.89
PTPRU-206ENST00000465525 MRIQ9BWK5 157 aa20.64■□□□□ 0.89
PTPRU-206ENST00000465525 FOXP2O15409 715 aa20.63■□□□□ 0.89
PTPRU-206ENST00000465525 CRKP46108 304 aa20.63■□□□□ 0.89
PTPRU-206ENST00000465525 RBM5P52756 815 aaKnown RBP eCLIP20.63■□□□□ 0.89
PTPRU-206ENST00000465525 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
PTPRU-206ENST00000465525 HDAC9Q9UKV0 1011 aa20.63■□□□□ 0.89
PTPRU-206ENST00000465525 BAZ2AQ9UIF9 1905 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms