RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 MAP3K9P80192 1104 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 CCL15Q16663 113 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 HABP4Q5JVS0 413 aaKnown RBP11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 SLC4A10Q6U841 1118 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 BRI3BPQ8WY22 251 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 FAM84BQ96KN1 310 aaPredicted RBP11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 TEPSINQ96N21 525 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 TMEM39BQ9GZU3 492 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 MRS2Q9HD23 443 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 CSADQ9Y600 493 aa11.47□□□□□ -0.57
RN7SL541P-201ENST00000464317 FRAT2O75474 233 aaPredicted RBP11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 WDHD1O75717 1129 aaPredicted RBP11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 CHAF1AQ13111 956 aaPredicted RBP11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 VGLL4Q14135 290 aa11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 NBPF11Q86T75 865 aa11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 SUCLG2Q96I99 432 aa11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 PUS3Q9BZE2 481 aaKnown RBP11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 SRCIN1Q9C0H9 1055 aa11.46□□□□□ -0.57
RN7SL541P-201ENST00000464317 CACNA1FO60840 1977 aa11.46□□□□□ -0.58
RN7SL541P-201ENST00000464317 LAMB1P07942 1786 aa11.46□□□□□ -0.58
RN7SL541P-201ENST00000464317 MROH5Q6ZUA9 1318 aa11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 CAP1Q01518 475 aa11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 SLC9C1Q4G0N8 1177 aa11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 IQSEC3Q9UPP2 1182 aaPredicted RBP11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
RN7SL541P-201ENST00000464317 CACNB3P54284 484 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 METTL24Q5JXM2 366 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 FAM43AQ8N2R8 423 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 TBC1D22AQ8WUA7 517 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 TEKT1Q969V4 418 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 TMOD2Q9NZR1 351 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 RIPOR2Q9Y4F9 1068 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
RN7SL541P-201ENST00000464317 SPDYE5A6NIY4 337 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 CETPP11597 493 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 HDLBPQ00341 1268 aaKnown RBP11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 KIF22Q14807 665 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 GRIK5Q16478 980 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 FBXO33Q7Z6M2 555 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 ERO1BQ86YB8 467 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 HOOK2Q96ED9 719 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 WRNIP1Q96S55 665 aa11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
RN7SL541P-201ENST00000464317 RBBP6Q7Z6E9 1792 aaKnown RBP11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 TLR2O60603 784 aa11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 SNAPC2Q13487 334 aa11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 LRRC24Q50LG9 513 aa11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 ZKSCAN4Q969J2 545 aaPredicted RBP11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 KAZALD1Q96I82 304 aa11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
RN7SL541P-201ENST00000464317 KIAA0100Q14667 2235 aaKnown RBP11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 MAST3O60307 1309 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 ARAP2Q8WZ64 1704 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 BTBD19C9JJ37 291 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 PDE8BO95263 885 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 BCAMP50895 628 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 DCAF15Q66K64 600 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 FAM83AQ86UY5 434 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 SH3TC2Q8TF17 1288 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 ZDHHC15Q96MV8 337 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 ARHGAP39Q9C0H5 1083 aa11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 ZCCHC17Q9NP64 241 aaKnown RBP11.41□□□□□ -0.58
RN7SL541P-201ENST00000464317 HTTP42858 3142 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 UTYO14607 1347 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 IRF6O14896 467 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 ANP32CO43423 234 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 GNRH1P01148 92 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 PPIL2Q13356 520 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 MRIQ9BWK5 157 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 SUGT1Q9Y2Z0 365 aa11.4□□□□□ -0.58
RN7SL541P-201ENST00000464317 IFIT1P09914 478 aaKnown RBP11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 PRMT2P55345 433 aa11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 PPATQ06203 517 aa11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 MIGA2Q7L4E1 593 aa11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 ANKRD44Q8N8A2 993 aa11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 VGLL2Q8N8G2 317 aa11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 KLHDC4Q8TBB5 520 aa11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
RN7SL541P-201ENST00000464317 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
RN7SL541P-201ENST00000464317 FXR1P51114 621 aaKnown RBP eCLIP11.38□□□□□ -0.59
RN7SL541P-201ENST00000464317 PUM3Q15397 648 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms