RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 INTS3Q68E01 1043 aaKnown RBP24.87■■□□□ 1.57
SHISA4-202ENST00000464117 SUGT1Q9Y2Z0 365 aa24.87■■□□□ 1.57
SHISA4-202ENST00000464117 NBPF12Q5TAG4 269 aaPredicted RBP24.86■■□□□ 1.57
SHISA4-202ENST00000464117 MRIQ9BWK5 157 aa24.86■■□□□ 1.57
SHISA4-202ENST00000464117 TDRD3Q9H7E2 651 aaKnown RBP24.86■■□□□ 1.57
SHISA4-202ENST00000464117 IPO8O15397 1037 aaKnown RBP24.85■■□□□ 1.57
SHISA4-202ENST00000464117 GRIK5Q16478 980 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 SPRYD7Q5W111 196 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 TEKT1Q969V4 418 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 SLC10A4Q96EP9 437 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 MEIS3Q99687 375 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 SIL1Q9H173 461 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 CEP126Q9P2H0 1117 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 FZD1Q9UP38 647 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 MAST3O60307 1309 aa24.85■■□□□ 1.57
SHISA4-202ENST00000464117 GNAI3P08754 354 aa24.84■■□□□ 1.57
SHISA4-202ENST00000464117 IL15P40933 162 aaPredicted RBP24.84■■□□□ 1.57
SHISA4-202ENST00000464117 IREB2P48200 963 aaKnown RBP24.84■■□□□ 1.57
SHISA4-202ENST00000464117 MKRN3Q13064 507 aaKnown RBP24.84■■□□□ 1.57
SHISA4-202ENST00000464117 TNNI2P48788 182 aa24.83■■□□□ 1.57
SHISA4-202ENST00000464117 COPRSQ9NQ92 184 aa24.83■■□□□ 1.57
SHISA4-202ENST00000464117 ZBTB48P10074 688 aaPredicted RBP24.82■■□□□ 1.56
SHISA4-202ENST00000464117 ATP2B3Q16720 1220 aa24.82■■□□□ 1.56
SHISA4-202ENST00000464117 WDR66Q8TBY9 1149 aa24.82■■□□□ 1.56
SHISA4-202ENST00000464117 CCDC85CA6NKD9 419 aa24.81■■□□□ 1.56
SHISA4-202ENST00000464117 USP2O75604 605 aaPredicted RBP24.81■■□□□ 1.56
SHISA4-202ENST00000464117 INHBEP58166 350 aa24.81■■□□□ 1.56
SHISA4-202ENST00000464117 ZDHHC15Q96MV8 337 aa24.81■■□□□ 1.56
SHISA4-202ENST00000464117 MANSC4A6NHS7 340 aaPredicted RBP24.8■■□□□ 1.56
SHISA4-202ENST00000464117 TCP10L2B9ZVM9 353 aa24.8■■□□□ 1.56
SHISA4-202ENST00000464117 NOM1Q5C9Z4 860 aaKnown RBP24.8■■□□□ 1.56
SHISA4-202ENST00000464117 HHIPL2Q6UWX4 724 aa24.8■■□□□ 1.56
SHISA4-202ENST00000464117 ATF7IPQ6VMQ6 1270 aa24.8■■□□□ 1.56
SHISA4-202ENST00000464117 ANKRD13AQ8IZ07 590 aa24.8■■□□□ 1.56
SHISA4-202ENST00000464117 WNK4Q96J92 1243 aa24.8■■□□□ 1.56
SHISA4-202ENST00000464117 CLMNQ96JQ2 1002 aa24.8■■□□□ 1.56
SHISA4-202ENST00000464117 TEPSINQ96N21 525 aa24.8■■□□□ 1.56
SHISA4-202ENST00000464117 GNL3LQ9NVN8 582 aaKnown RBP24.8■■□□□ 1.56
SHISA4-202ENST00000464117 PA2G4Q9UQ80 394 aaKnown RBP24.8■■□□□ 1.56
SHISA4-202ENST00000464117 MYH13Q9UKX3 1938 aa24.79■■□□□ 1.56
SHISA4-202ENST00000464117 TRIM27P14373 513 aa24.79■■□□□ 1.56
SHISA4-202ENST00000464117 MTX1Q13505 466 aa24.79■■□□□ 1.56
SHISA4-202ENST00000464117 CFHR5Q9BXR6 569 aa24.79■■□□□ 1.56
SHISA4-202ENST00000464117 TMOD2Q9NZR1 351 aa24.79■■□□□ 1.56
SHISA4-202ENST00000464117 TBC1D8O95759 1140 aa24.78■■□□□ 1.56
SHISA4-202ENST00000464117 ALDH1A1P00352 501 aa24.78■■□□□ 1.56
SHISA4-202ENST00000464117 FKBP1CQ5VVH2 108 aa24.78■■□□□ 1.56
SHISA4-202ENST00000464117 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
SHISA4-202ENST00000464117 CTU1Q7Z7A3 348 aaKnown RBP24.78■■□□□ 1.56
SHISA4-202ENST00000464117 MIER1Q8N108 512 aa24.78■■□□□ 1.56
SHISA4-202ENST00000464117 FRAT1Q92837 279 aaPredicted RBP24.78■■□□□ 1.56
SHISA4-202ENST00000464117 TMEM39BQ9GZU3 492 aa24.78■■□□□ 1.56
SHISA4-202ENST00000464117 SEMA3EO15041 775 aa24.77■■□□□ 1.56
SHISA4-202ENST00000464117 ZBTB22O15209 634 aa24.77■■□□□ 1.56
SHISA4-202ENST00000464117 BCAR3O75815 825 aa24.77■■□□□ 1.56
SHISA4-202ENST00000464117 APOBEC3HQ6NTF7 200 aaKnown RBP24.77■■□□□ 1.56
SHISA4-202ENST00000464117 SRGAP3O43295 1099 aa24.76■■□□□ 1.55
SHISA4-202ENST00000464117 HNRNPUQ00839 825 aaKnown RBP eCLIP24.76■■□□□ 1.55
SHISA4-202ENST00000464117 FAM83AQ86UY5 434 aa24.76■■□□□ 1.55
SHISA4-202ENST00000464117 LAMB1P07942 1786 aa24.75■■□□□ 1.55
SHISA4-202ENST00000464117 CDAN1Q8IWY9 1227 aa24.75■■□□□ 1.55
SHISA4-202ENST00000464117 ZNF296Q8WUU4 475 aaPredicted RBP24.75■■□□□ 1.55
SHISA4-202ENST00000464117 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.75■■□□□ 1.55
SHISA4-202ENST00000464117 DENND2AQ9ULE3 1009 aa24.75■■□□□ 1.55
SHISA4-202ENST00000464117 GPR25O00155 361 aa24.74■■□□□ 1.55
SHISA4-202ENST00000464117 IFNL1Q8IU54 200 aa24.74■■□□□ 1.55
SHISA4-202ENST00000464117 SALL1Q9NSC2 1324 aa24.74■■□□□ 1.55
SHISA4-202ENST00000464117 GNAI2P04899 355 aa24.73■■□□□ 1.55
SHISA4-202ENST00000464117 PHKA1P46020 1223 aa24.73■■□□□ 1.55
SHISA4-202ENST00000464117 CACNB3P54284 484 aa24.73■■□□□ 1.55
SHISA4-202ENST00000464117 HOOK2Q96ED9 719 aa24.73■■□□□ 1.55
SHISA4-202ENST00000464117 AKAP2Q9Y2D5 859 aa24.73■■□□□ 1.55
SHISA4-202ENST00000464117 OTOFQ9HC10 1997 aa24.73■■□□□ 1.55
SHISA4-202ENST00000464117 RGS19P49795 217 aa24.72■■□□□ 1.55
SHISA4-202ENST00000464117 ZKSCAN2Q63HK3 967 aa24.72■■□□□ 1.55
SHISA4-202ENST00000464117 RPAP1Q9BWH6 1393 aaPredicted RBP24.71■■□□□ 1.55
SHISA4-202ENST00000464117 LDHBP07195 334 aaKnown RBP24.71■■□□□ 1.55
SHISA4-202ENST00000464117 PRDX5P30044 214 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 GJA5P36382 358 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 MAP3K9P80192 1104 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 PKN2Q16513 984 aaKnown RBP24.71■■□□□ 1.55
SHISA4-202ENST00000464117 CCDC102BQ68D86 513 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 OTUD7BQ6GQQ9 843 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.71■■□□□ 1.55
SHISA4-202ENST00000464117 ZGPATQ8N5A5 531 aaKnown RBP24.71■■□□□ 1.55
SHISA4-202ENST00000464117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.71■■□□□ 1.55
SHISA4-202ENST00000464117 CLUAP1Q96AJ1 413 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 ELP3Q9H9T3 547 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 TNNQ9UQP3 1299 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 DAGLAQ9Y4D2 1042 aa24.71■■□□□ 1.55
SHISA4-202ENST00000464117 ADORA1P30542 326 aa24.7■■□□□ 1.54
SHISA4-202ENST00000464117 OPTNQ96CV9 577 aa24.7■■□□□ 1.54
SHISA4-202ENST00000464117 CSADQ9Y600 493 aa24.7■■□□□ 1.54
SHISA4-202ENST00000464117 PDS5AQ29RF7 1337 aaKnown RBP24.69■■□□□ 1.54
SHISA4-202ENST00000464117 TESPA1A2RU30 521 aaPredicted RBP24.69■■□□□ 1.54
SHISA4-202ENST00000464117 IGF2BP3O00425 579 aaKnown RBP eCLIP24.69■■□□□ 1.54
SHISA4-202ENST00000464117 FKTNO75072 461 aa24.69■■□□□ 1.54
SHISA4-202ENST00000464117 TIMM10P62072 90 aa24.69■■□□□ 1.54
SHISA4-202ENST00000464117 TFCP2Q12800 502 aa24.69■■□□□ 1.54
SHISA4-202ENST00000464117 VGLL4Q14135 290 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms