RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 PRPHP41219 470 aa15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 HS1BP3Q53T59 392 aa15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 CCDC186Q7Z3E2 898 aa15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 LPIN2Q92539 896 aa15.27■□□□□ 0.03
CHRNA4-202ENST00000463705 DEXIO95424 95 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 TAF3Q5VWG9 929 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 ELP1O95163 1332 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 YEATS2Q9ULM3 1422 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 CTNNA2P26232 953 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 TNNI2P48788 182 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 PPP2R5BQ15173 497 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 NBPF14Q5TI25 921 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 CTNNBL1Q8WYA6 563 aaPredicted RBP15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 TTC12Q9H892 705 aaPredicted RBP15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 KDRP35968 1356 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 RILPL1Q5EBL4 403 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 DTHD1Q6ZMT9 781 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 KBTBD3Q8NAB2 608 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 ERVK-7P63135 1459 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 CHMP4BP1P59074 171 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
CHRNA4-202ENST00000463705 SKILP12757 684 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 ERBB4Q15303 1308 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 KDM5CP41229 1560 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 A1BGP04217 495 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 ZNF830Q96NB3 372 aaPredicted RBP15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 GLT8D2Q9H1C3 349 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 TMX1Q9H3N1 280 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 DYNC1I1O14576 645 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 KRT83P78385 493 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 WDR66Q8TBY9 1149 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 FERMT1Q9BQL6 677 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 GOPCQ9HD26 462 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 NF2P35240 595 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 SRRTQ9BXP5 876 aaKnown RBP15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 JADE2Q9NQC1 790 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
CHRNA4-202ENST00000463705 GOLGA6L10A0A0M3HER8 536 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 TEX11Q8IYF3 940 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 CLCN1P35523 988 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 NOLC1Q14978 699 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 FMNL3Q8IVF7 1028 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 FAM227BQ96M60 508 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 DNA2P51530 1060 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 TUBB4BP68371 445 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 IL17REQ8NFR9 667 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 PLEKHF1Q96S99 279 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 GGA1Q9UJY5 639 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 ZKSCAN5Q9Y2L8 839 aa15.24■□□□□ 0.03
CHRNA4-202ENST00000463705 UFL1O94874 794 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 FAM160A1Q05DH4 1040 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 HLTFQ14527 1009 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 SMC1AQ14683 1233 aaKnown RBP15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 TRMT2AQ8IZ69 625 aaKnown RBP15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 ANGEL1Q9UNK9 670 aaKnown RBP15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 STK24Q9Y6E0 443 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 MICALCLQ6ZW33 695 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 ZNF594Q96JF6 807 aaPredicted RBP15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 VEZTQ9HBM0 779 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 FAM13AO94988 1023 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 CCDC175P0C221 793 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 RXRAP19793 462 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 MCM7P33993 719 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 PLCD1P51178 756 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
CHRNA4-202ENST00000463705 HECW2Q9P2P5 1572 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 GPAA1O43292 621 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 TACC1O75410 805 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 SELENOOQ9BVL4 669 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 IBSPP21815 317 aaPredicted RBP15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 HSP90AA4PQ58FG1 418 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 IBTKQ9P2D0 1353 aaPredicted RBP15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 MACROD2A1Z1Q3 448 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 DSCC1Q9BVC3 393 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 FAM107BQ9H098 131 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 SLAIN2Q9P270 581 aa15.22■□□□□ 0.03
CHRNA4-202ENST00000463705 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 ATP5JP18859 108 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 NEURL1BA8MQ27 555 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 GIGYF1O75420 1035 aaPredicted RBP15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 ARMT1Q9H993 441 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 CTAGE15A4D2H0 777 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 CTAGE8P0CG41 777 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 LMOD1P29536 600 aaPredicted RBP15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 PRPF4BQ13523 1007 aaKnown RBP15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 HS2ST1Q7LGA3 356 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 CTAGE6Q86UF2 777 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 CTAGE4Q8IX94 777 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 SSH3Q8TE77 659 aa15.21■□□□□ 0.03
CHRNA4-202ENST00000463705 LZTS2Q9BRK4 669 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms