RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TDRD3Q9H7E2 651 aaKnown RBP21.86■■□□□ 1.09
HMGN1-209ENST00000463631 ELP3Q9H9T3 547 aa21.86■■□□□ 1.09
HMGN1-209ENST00000463631 EFCC1Q9HA90 598 aa21.86■■□□□ 1.09
HMGN1-209ENST00000463631 SPINK5Q9NQ38 1064 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-209ENST00000463631 BRCA2P51587 3418 aa21.86■■□□□ 1.09
HMGN1-209ENST00000463631 UTYO14607 1347 aa21.85■■□□□ 1.09
HMGN1-209ENST00000463631 MROH5Q6ZUA9 1318 aa21.85■■□□□ 1.09
HMGN1-209ENST00000463631 POTEFA5A3E0 1075 aa21.85■■□□□ 1.09
HMGN1-209ENST00000463631 CDAN1Q8IWY9 1227 aa21.85■■□□□ 1.09
HMGN1-209ENST00000463631 RIPOR2Q9Y4F9 1068 aa21.85■■□□□ 1.09
HMGN1-209ENST00000463631 CRKP46108 304 aa21.84■■□□□ 1.09
HMGN1-209ENST00000463631 TNNI2P48788 182 aa21.84■■□□□ 1.09
HMGN1-209ENST00000463631 HDLBPQ00341 1268 aaKnown RBP21.84■■□□□ 1.09
HMGN1-209ENST00000463631 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.84■■□□□ 1.09
HMGN1-209ENST00000463631 PUS3Q9BZE2 481 aaKnown RBP21.84■■□□□ 1.09
HMGN1-209ENST00000463631 VGLL4Q14135 290 aa21.83■■□□□ 1.09
HMGN1-209ENST00000463631 RABL6Q3YEC7 729 aaPredicted RBP21.83■■□□□ 1.09
HMGN1-209ENST00000463631 FBXO33Q7Z6M2 555 aa21.83■■□□□ 1.09
HMGN1-209ENST00000463631 BRI3BPQ8WY22 251 aa21.83■■□□□ 1.09
HMGN1-209ENST00000463631 SUCLG2Q96I99 432 aa21.83■■□□□ 1.09
HMGN1-209ENST00000463631 TMEM39BQ9GZU3 492 aa21.83■■□□□ 1.09
HMGN1-209ENST00000463631 GTF2A2P52657 109 aa21.82■■□□□ 1.08
HMGN1-209ENST00000463631 CAP1Q01518 475 aa21.82■■□□□ 1.08
HMGN1-209ENST00000463631 TBC1D22AQ8WUA7 517 aa21.82■■□□□ 1.08
HMGN1-209ENST00000463631 SALL2Q9Y467 1007 aaPredicted RBP21.82■■□□□ 1.08
HMGN1-209ENST00000463631 CEP290O15078 2479 aa21.82■■□□□ 1.08
HMGN1-209ENST00000463631 CCL15-CCL14A0A0B4J2E2 113 aa21.81■■□□□ 1.08
HMGN1-209ENST00000463631 TCP10L2B9ZVM9 353 aa21.81■■□□□ 1.08
HMGN1-209ENST00000463631 NBPF7P0C2Y1 421 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-209ENST00000463631 MAP3K9P80192 1104 aa21.81■■□□□ 1.08
HMGN1-209ENST00000463631 CCL15Q16663 113 aa21.81■■□□□ 1.08
HMGN1-209ENST00000463631 SLC4A10Q6U841 1118 aa21.81■■□□□ 1.08
HMGN1-209ENST00000463631 RPAP1Q9BWH6 1393 aaPredicted RBP21.8■■□□□ 1.08
HMGN1-209ENST00000463631 SPDYE5A6NIY4 337 aa21.8■■□□□ 1.08
HMGN1-209ENST00000463631 ARHGEF6Q15052 776 aa21.8■■□□□ 1.08
HMGN1-209ENST00000463631 GRIK5Q16478 980 aa21.8■■□□□ 1.08
HMGN1-209ENST00000463631 VGLL2Q8N8G2 317 aa21.8■■□□□ 1.08
HMGN1-209ENST00000463631 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
HMGN1-209ENST00000463631 CSADQ9Y600 493 aa21.8■■□□□ 1.08
HMGN1-209ENST00000463631 TAF1CQ15572 869 aaPredicted RBP21.79■■□□□ 1.08
HMGN1-209ENST00000463631 FKBP1CQ5VVH2 108 aa21.79■■□□□ 1.08
HMGN1-209ENST00000463631 VPS37DQ86XT2 251 aa21.79■■□□□ 1.08
HMGN1-209ENST00000463631 TEKT1Q969V4 418 aa21.79■■□□□ 1.08
HMGN1-209ENST00000463631 ZNF333Q96JL9 665 aa21.79■■□□□ 1.08
HMGN1-209ENST00000463631 MRIQ9BWK5 157 aa21.79■■□□□ 1.08
HMGN1-209ENST00000463631 BICC1Q9H694 974 aaKnown RBP21.79■■□□□ 1.08
HMGN1-209ENST00000463631 ZFYVE28Q9HCC9 887 aa21.79■■□□□ 1.08
HMGN1-209ENST00000463631 ZCCHC17Q9NP64 241 aaKnown RBP21.79■■□□□ 1.08
HMGN1-209ENST00000463631 KIF16BQ96L93 1317 aa21.79■■□□□ 1.08
HMGN1-209ENST00000463631 FAM83AQ86UY5 434 aa21.78■■□□□ 1.08
HMGN1-209ENST00000463631 FAM43AQ8N2R8 423 aa21.78■■□□□ 1.08
HMGN1-209ENST00000463631 OTUD5Q96G74 571 aa21.78■■□□□ 1.08
HMGN1-209ENST00000463631 PDE8BO95263 885 aa21.77■■□□□ 1.08
HMGN1-209ENST00000463631 CAVIN4Q5BKX8 364 aa21.77■■□□□ 1.08
HMGN1-209ENST00000463631 ANKRD44Q8N8A2 993 aa21.77■■□□□ 1.08
HMGN1-209ENST00000463631 ZDHHC15Q96MV8 337 aa21.77■■□□□ 1.08
HMGN1-209ENST00000463631 IQSEC3Q9UPP2 1182 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-209ENST00000463631 SUGT1Q9Y2Z0 365 aa21.77■■□□□ 1.08
HMGN1-209ENST00000463631 SNCAIPQ9Y6H5 919 aa21.77■■□□□ 1.08
HMGN1-209ENST00000463631 MAST3O60307 1309 aa21.77■■□□□ 1.07
HMGN1-209ENST00000463631 LRRC24Q50LG9 513 aa21.76■■□□□ 1.07
HMGN1-209ENST00000463631 HABP4Q5JVS0 413 aaKnown RBP21.76■■□□□ 1.07
HMGN1-209ENST00000463631 METTL24Q5JXM2 366 aa21.76■■□□□ 1.07
HMGN1-209ENST00000463631 ERO1BQ86YB8 467 aa21.76■■□□□ 1.07
HMGN1-209ENST00000463631 HOOK2Q96ED9 719 aa21.76■■□□□ 1.07
HMGN1-209ENST00000463631 MYH13Q9UKX3 1938 aa21.76■■□□□ 1.07
HMGN1-209ENST00000463631 ANP32CO43423 234 aa21.75■■□□□ 1.07
HMGN1-209ENST00000463631 CETPP11597 493 aa21.75■■□□□ 1.07
HMGN1-209ENST00000463631 EN2P19622 333 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-209ENST00000463631 CHAF1AQ13111 956 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-209ENST00000463631 SLC9C1Q4G0N8 1177 aa21.75■■□□□ 1.07
HMGN1-209ENST00000463631 TMOD2Q9NZR1 351 aa21.75■■□□□ 1.07
HMGN1-209ENST00000463631 TLR2O60603 784 aa21.74■■□□□ 1.07
HMGN1-209ENST00000463631 WDHD1O75717 1129 aaPredicted RBP21.74■■□□□ 1.07
HMGN1-209ENST00000463631 CACNB3P54284 484 aa21.74■■□□□ 1.07
HMGN1-209ENST00000463631 APOBEC3HQ6NTF7 200 aaKnown RBP21.74■■□□□ 1.07
HMGN1-209ENST00000463631 NBPF11Q86T75 865 aa21.74■■□□□ 1.07
HMGN1-209ENST00000463631 WRNIP1Q96S55 665 aa21.74■■□□□ 1.07
HMGN1-209ENST00000463631 TMEM106CQ9BVX2 250 aa21.74■■□□□ 1.07
HMGN1-209ENST00000463631 PTCH2Q9Y6C5 1203 aa21.74■■□□□ 1.07
HMGN1-209ENST00000463631 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
HMGN1-209ENST00000463631 ZSWIM8A7E2V4 1837 aa21.73■■□□□ 1.07
HMGN1-209ENST00000463631 FRAT2O75474 233 aaPredicted RBP21.73■■□□□ 1.07
HMGN1-209ENST00000463631 PPIL2Q13356 520 aa21.73■■□□□ 1.07
HMGN1-209ENST00000463631 HHIPL2Q6UWX4 724 aa21.73■■□□□ 1.07
HMGN1-209ENST00000463631 PTPRCP08575 1304 aa21.73■■□□□ 1.07
HMGN1-209ENST00000463631 GNRH1P01148 92 aa21.72■■□□□ 1.07
HMGN1-209ENST00000463631 SNAPC2Q13487 334 aa21.72■■□□□ 1.07
HMGN1-209ENST00000463631 PUM3Q15397 648 aaKnown RBP21.72■■□□□ 1.07
HMGN1-209ENST00000463631 IRF6O14896 467 aa21.71■■□□□ 1.07
HMGN1-209ENST00000463631 FGFR2P21802 821 aa21.71■■□□□ 1.07
HMGN1-209ENST00000463631 BCAMP50895 628 aa21.71■■□□□ 1.07
HMGN1-209ENST00000463631 LACTBP83111 547 aaPredicted RBP21.71■■□□□ 1.07
HMGN1-209ENST00000463631 DCAF15Q66K64 600 aa21.71■■□□□ 1.07
HMGN1-209ENST00000463631 BTBD19C9JJ37 291 aa21.7■■□□□ 1.06
HMGN1-209ENST00000463631 IFIT1P09914 478 aaKnown RBP21.7■■□□□ 1.06
HMGN1-209ENST00000463631 MRPL50Q8N5N7 158 aaKnown RBP21.7■■□□□ 1.06
HMGN1-209ENST00000463631 ZKSCAN4Q969J2 545 aaPredicted RBP21.7■■□□□ 1.06
HMGN1-209ENST00000463631 PRMT2P55345 433 aa21.69■■□□□ 1.06
HMGN1-209ENST00000463631 KIF22Q14807 665 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms