RNA–Protein interactions for RNA: ENST00000463317.6

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317 PPP1R42Q7Z4L9 355 aa7.78□□□□□ -1.16
VAMP7-204ENST00000463317 ANKRD13AQ8IZ07 590 aa7.78□□□□□ -1.16
VAMP7-204ENST00000463317 TBC1D16Q8TBP0 767 aa7.78□□□□□ -1.16
VAMP7-204ENST00000463317 DEFB129Q9H1M3 183 aa7.78□□□□□ -1.16
VAMP7-204ENST00000463317 C11orf49Q9H6J7 331 aa7.78□□□□□ -1.16
VAMP7-204ENST00000463317 TCF20Q9UGU0 1960 aaKnown RBP7.78□□□□□ -1.16
VAMP7-204ENST00000463317 PFASO15067 1338 aa7.78□□□□□ -1.16
VAMP7-204ENST00000463317 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 OTOFQ9HC10 1997 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 XIRP2A4UGR9 3374 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 C5orf42Q9H799 3197 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 ADCY3O60266 1144 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 WDHD1O75717 1129 aaPredicted RBP7.77□□□□□ -1.17
VAMP7-204ENST00000463317 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
VAMP7-204ENST00000463317 IRX5P78411 483 aaPredicted RBP7.77□□□□□ -1.17
VAMP7-204ENST00000463317 IL27Q8NEV9 243 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 ZBED3Q96IU2 234 aaPredicted RBP7.77□□□□□ -1.17
VAMP7-204ENST00000463317 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
VAMP7-204ENST00000463317 OCEL1Q9H607 264 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 ELP3Q9H9T3 547 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 GABRQQ9UN88 632 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 CHD8Q9HCK8 2581 aa7.77□□□□□ -1.17
VAMP7-204ENST00000463317 CHD9Q3L8U1 2897 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 USP17L3A6NCW0 530 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 USP17L4A6NCW7 530 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 FAM86C2PA6NEL3 165 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 BTBD19C9JJ37 291 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 SMIM22K7EJ46 135 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 RIOK3O14730 519 aaKnown RBP7.76□□□□□ -1.17
VAMP7-204ENST00000463317 ELNP15502 786 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 SHHQ15465 462 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 PARP10Q53GL7 1025 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 POTEEQ6S8J3 1075 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 TTLL7Q6ZT98 887 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 USP17L1Q7RTZ2 530 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 PXYLP1Q8TE99 480 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 SCUBE2Q9NQ36 999 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 CPA4Q9UI42 421 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 KMT2BQ9UMN6 2715 aaPredicted RBP7.76□□□□□ -1.17
VAMP7-204ENST00000463317 COL4A1P02462 1669 aa7.76□□□□□ -1.17
VAMP7-204ENST00000463317 CEMIPQ8WUJ3 1361 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 BTBD11A6QL63 1104 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 ST18O60284 1047 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 HCLS1P14317 486 aaPredicted RBP7.75□□□□□ -1.17
VAMP7-204ENST00000463317 C9orf50Q5SZB4 431 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 AKNAD1Q5T1N1 836 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 GIGYF2Q6Y7W6 1299 aaKnown RBP7.75□□□□□ -1.17
VAMP7-204ENST00000463317 OGFOD1Q8N543 542 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 PPM1EQ8WY54 764 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 COL26A1Q96A83 441 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 UTP14AQ9BVJ6 771 aaKnown RBP7.75□□□□□ -1.17
VAMP7-204ENST00000463317 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.75□□□□□ -1.17
VAMP7-204ENST00000463317 PODXL2Q9NZ53 605 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 PPP2R3BQ9Y5P8 575 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 EPG5Q9HCE0 2579 aa7.75□□□□□ -1.17
VAMP7-204ENST00000463317 POTEMA6NI47 508 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 G3V3G9 751 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 COL6A1P12109 1028 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 MMP14P50281 582 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 LRRC26Q2I0M4 334 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 SUPT20HL1Q3ZLR7 823 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 NBPF12Q5TAG4 269 aaPredicted RBP7.74□□□□□ -1.17
VAMP7-204ENST00000463317 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.74□□□□□ -1.17
VAMP7-204ENST00000463317 CELF1Q92879 486 aaKnown RBP7.74□□□□□ -1.17
VAMP7-204ENST00000463317 KHSRPQ92945 711 aaKnown RBP eCLIP7.74□□□□□ -1.177e-9■■■□□ 15.4
VAMP7-204ENST00000463317 RNF25Q96BH1 459 aaPredicted RBP7.74□□□□□ -1.17
VAMP7-204ENST00000463317 LBHD1Q9BQE6 289 aaPredicted RBP7.74□□□□□ -1.17
VAMP7-204ENST00000463317 ZBTB3Q9H5J0 574 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 MGAMO43451 1857 aa7.74□□□□□ -1.17
VAMP7-204ENST00000463317 KRT37O76014 449 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 HMOX1P09601 288 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 CETPP11597 493 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 FLT3LGP49771 235 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 IRF5Q13568 498 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 DACT2Q5SW24 774 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 KIF6Q6ZMV9 814 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 PODNQ7Z5L7 613 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 NGEFQ8N5V2 710 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 MTMR14Q8NCE2 650 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 FBXL18Q96ME1 805 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 MXD3Q9BW11 206 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 CXXC1Q9P0U4 656 aaPredicted RBP7.73□□□□□ -1.17
VAMP7-204ENST00000463317 OGDHLQ9ULD0 1010 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 ZNF804BA4D1E1 1349 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 LTBP2Q14767 1821 aa7.73□□□□□ -1.17
VAMP7-204ENST00000463317 GNAT3A8MTJ3 354 aa7.72□□□□□ -1.17
VAMP7-204ENST00000463317 PRR33A8MZF0 331 aa7.72□□□□□ -1.17
VAMP7-204ENST00000463317 UFL1O94874 794 aa7.72□□□□□ -1.17
VAMP7-204ENST00000463317 FCGRTP55899 365 aa7.72□□□□□ -1.17
VAMP7-204ENST00000463317 SIN3AQ96ST3 1273 aa7.72□□□□□ -1.17
VAMP7-204ENST00000463317 KCNH6Q9H252 994 aa7.72□□□□□ -1.17
VAMP7-204ENST00000463317 MYO3BQ8WXR4 1341 aa7.72□□□□□ -1.17
VAMP7-204ENST00000463317 PI4K2BG5E9Z4 385 aa7.71□□□□□ -1.18
VAMP7-204ENST00000463317 BCRP11274 1271 aa7.71□□□□□ -1.18
VAMP7-204ENST00000463317 VGLL4Q14135 290 aa7.71□□□□□ -1.18
VAMP7-204ENST00000463317 PDE3AQ14432 1141 aa7.71□□□□□ -1.18
VAMP7-204ENST00000463317 ZBTB38Q8NAP3 1195 aaPredicted RBP7.71□□□□□ -1.18
VAMP7-204ENST00000463317 CHD7Q9P2D1 2997 aa7.71□□□□□ -1.18
VAMP7-204ENST00000463317 DCHS1Q96JQ0 3298 aa7.7□□□□□ -1.18
VAMP7-204ENST00000463317 MAST2Q6P0Q8 1798 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms