RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 KAZALD1Q96I82 304 aa26.23■■□□□ 1.79
CPSF7-209ENST00000463244 MS4A4AQ96JQ5 239 aa26.23■■□□□ 1.79
CPSF7-209ENST00000463244 PUS3Q9BZE2 481 aaKnown RBP26.23■■□□□ 1.79
CPSF7-209ENST00000463244 SRCIN1Q9C0H9 1055 aa26.23■■□□□ 1.79
CPSF7-209ENST00000463244 EFCC1Q9HA90 598 aa26.23■■□□□ 1.79
CPSF7-209ENST00000463244 SP3Q02447 781 aa26.22■■□□□ 1.79
CPSF7-209ENST00000463244 SLC4A10Q6U841 1118 aa26.22■■□□□ 1.79
CPSF7-209ENST00000463244 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.22■■□□□ 1.79
CPSF7-209ENST00000463244 SUCLG2Q96I99 432 aa26.22■■□□□ 1.79
CPSF7-209ENST00000463244 CRKP46108 304 aa26.21■■□□□ 1.79
CPSF7-209ENST00000463244 CAP1Q01518 475 aa26.21■■□□□ 1.79
CPSF7-209ENST00000463244 ARMC5Q96C12 935 aa26.21■■□□□ 1.79
CPSF7-209ENST00000463244 RIPOR2Q9Y4F9 1068 aa26.21■■□□□ 1.79
CPSF7-209ENST00000463244 TCP10L2B9ZVM9 353 aa26.2■■□□□ 1.78
CPSF7-209ENST00000463244 TMEM39BQ9GZU3 492 aa26.2■■□□□ 1.78
CPSF7-209ENST00000463244 MROH5Q6ZUA9 1318 aa26.19■■□□□ 1.78
CPSF7-209ENST00000463244 CNKSR2Q8WXI2 1034 aa26.19■■□□□ 1.78
CPSF7-209ENST00000463244 GCC1Q96CN9 775 aa26.19■■□□□ 1.78
CPSF7-209ENST00000463244 NBPF7P0C2Y1 421 aaPredicted RBP26.18■■□□□ 1.78
CPSF7-209ENST00000463244 TNNI2P48788 182 aa26.18■■□□□ 1.78
CPSF7-209ENST00000463244 VGLL4Q14135 290 aa26.18■■□□□ 1.78
CPSF7-209ENST00000463244 GRIK5Q16478 980 aa26.18■■□□□ 1.78
CPSF7-209ENST00000463244 FBXO33Q7Z6M2 555 aa26.18■■□□□ 1.78
CPSF7-209ENST00000463244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.18■■□□□ 1.78
CPSF7-209ENST00000463244 BRI3BPQ8WY22 251 aa26.18■■□□□ 1.78
CPSF7-209ENST00000463244 UTYO14607 1347 aa26.17■■□□□ 1.78
CPSF7-209ENST00000463244 GTF2A2P52657 109 aa26.17■■□□□ 1.78
CPSF7-209ENST00000463244 MAP3K9P80192 1104 aa26.17■■□□□ 1.78
CPSF7-209ENST00000463244 CCL15-CCL14A0A0B4J2E2 113 aa26.16■■□□□ 1.78
CPSF7-209ENST00000463244 HDLBPQ00341 1268 aaKnown RBP26.16■■□□□ 1.78
CPSF7-209ENST00000463244 CCL15Q16663 113 aa26.16■■□□□ 1.78
CPSF7-209ENST00000463244 VPS37DQ86XT2 251 aa26.16■■□□□ 1.78
CPSF7-209ENST00000463244 IQSEC3Q9UPP2 1182 aaPredicted RBP26.16■■□□□ 1.78
CPSF7-209ENST00000463244 TAF1CQ15572 869 aaPredicted RBP26.15■■□□□ 1.78
CPSF7-209ENST00000463244 RABL6Q3YEC7 729 aaPredicted RBP26.15■■□□□ 1.78
CPSF7-209ENST00000463244 TBC1D22AQ8WUA7 517 aa26.15■■□□□ 1.78
CPSF7-209ENST00000463244 BICC1Q9H694 974 aaKnown RBP26.15■■□□□ 1.78
CPSF7-209ENST00000463244 ZFYVE28Q9HCC9 887 aa26.15■■□□□ 1.78
CPSF7-209ENST00000463244 CSADQ9Y600 493 aa26.15■■□□□ 1.78
CPSF7-209ENST00000463244 CEP290O15078 2479 aa26.14■■□□□ 1.78
CPSF7-209ENST00000463244 CHAF1AQ13111 956 aaPredicted RBP26.14■■□□□ 1.78
CPSF7-209ENST00000463244 LRRC24Q50LG9 513 aa26.14■■□□□ 1.78
CPSF7-209ENST00000463244 FAM43AQ8N2R8 423 aa26.13■■□□□ 1.77
CPSF7-209ENST00000463244 VGLL2Q8N8G2 317 aa26.13■■□□□ 1.77
CPSF7-209ENST00000463244 TEKT1Q969V4 418 aa26.13■■□□□ 1.77
CPSF7-209ENST00000463244 OTUD5Q96G74 571 aa26.13■■□□□ 1.77
CPSF7-209ENST00000463244 ANP32CO43423 234 aa26.12■■□□□ 1.77
CPSF7-209ENST00000463244 EN2P19622 333 aaPredicted RBP26.12■■□□□ 1.77
CPSF7-209ENST00000463244 ARHGEF6Q15052 776 aa26.12■■□□□ 1.77
CPSF7-209ENST00000463244 CAVIN4Q5BKX8 364 aa26.12■■□□□ 1.77
CPSF7-209ENST00000463244 METTL24Q5JXM2 366 aa26.12■■□□□ 1.77
CPSF7-209ENST00000463244 ANKRD44Q8N8A2 993 aa26.12■■□□□ 1.77
CPSF7-209ENST00000463244 ZNF333Q96JL9 665 aa26.12■■□□□ 1.77
CPSF7-209ENST00000463244 SPDYE5A6NIY4 337 aa26.11■■□□□ 1.77
CPSF7-209ENST00000463244 FRAT2O75474 233 aaPredicted RBP26.11■■□□□ 1.77
CPSF7-209ENST00000463244 CACNB3P54284 484 aa26.11■■□□□ 1.77
CPSF7-209ENST00000463244 MRIQ9BWK5 157 aa26.11■■□□□ 1.77
CPSF7-209ENST00000463244 PDE8BO95263 885 aa26.1■■□□□ 1.77
CPSF7-209ENST00000463244 ZDHHC15Q96MV8 337 aa26.1■■□□□ 1.77
CPSF7-209ENST00000463244 PTCH2Q9Y6C5 1203 aa26.1■■□□□ 1.77
CPSF7-209ENST00000463244 SNCAIPQ9Y6H5 919 aa26.1■■□□□ 1.77
CPSF7-209ENST00000463244 HABP4Q5JVS0 413 aaKnown RBP26.09■■□□□ 1.77
CPSF7-209ENST00000463244 FKBP1CQ5VVH2 108 aa26.09■■□□□ 1.77
CPSF7-209ENST00000463244 FAM83AQ86UY5 434 aa26.09■■□□□ 1.77
CPSF7-209ENST00000463244 ERO1BQ86YB8 467 aa26.09■■□□□ 1.77
CPSF7-209ENST00000463244 TMEM106CQ9BVX2 250 aa26.09■■□□□ 1.77
CPSF7-209ENST00000463244 BCAMP50895 628 aa26.08■■□□□ 1.77
CPSF7-209ENST00000463244 SLC9C1Q4G0N8 1177 aa26.08■■□□□ 1.77
CPSF7-209ENST00000463244 APOBEC3HQ6NTF7 200 aaKnown RBP26.08■■□□□ 1.77
CPSF7-209ENST00000463244 WRNIP1Q96S55 665 aa26.08■■□□□ 1.77
CPSF7-209ENST00000463244 TMOD2Q9NZR1 351 aa26.08■■□□□ 1.77
CPSF7-209ENST00000463244 SUGT1Q9Y2Z0 365 aa26.08■■□□□ 1.77
CPSF7-209ENST00000463244 CETPP11597 493 aa26.07■■□□□ 1.76
CPSF7-209ENST00000463244 NBPF11Q86T75 865 aa26.07■■□□□ 1.76
CPSF7-209ENST00000463244 ZCCHC17Q9NP64 241 aaKnown RBP26.07■■□□□ 1.76
CPSF7-209ENST00000463244 MAST3O60307 1309 aa26.07■■□□□ 1.76
CPSF7-209ENST00000463244 KIF16BQ96L93 1317 aa26.07■■□□□ 1.76
CPSF7-209ENST00000463244 ZSWIM8A7E2V4 1837 aa26.07■■□□□ 1.76
CPSF7-209ENST00000463244 RPAP1Q9BWH6 1393 aaPredicted RBP26.07■■□□□ 1.76
CPSF7-209ENST00000463244 MYH13Q9UKX3 1938 aa26.06■■□□□ 1.76
CPSF7-209ENST00000463244 TLR2O60603 784 aa26.06■■□□□ 1.76
CPSF7-209ENST00000463244 WDHD1O75717 1129 aaPredicted RBP26.06■■□□□ 1.76
CPSF7-209ENST00000463244 KLHDC4Q8TBB5 520 aa26.06■■□□□ 1.76
CPSF7-209ENST00000463244 ZKSCAN4Q969J2 545 aaPredicted RBP26.06■■□□□ 1.76
CPSF7-209ENST00000463244 HOOK2Q96ED9 719 aa26.06■■□□□ 1.76
CPSF7-209ENST00000463244 BTBD19C9JJ37 291 aa26.05■■□□□ 1.76
CPSF7-209ENST00000463244 IRF6O14896 467 aa26.05■■□□□ 1.76
CPSF7-209ENST00000463244 HHIPL2Q6UWX4 724 aa26.05■■□□□ 1.76
CPSF7-209ENST00000463244 MRPL50Q8N5N7 158 aaKnown RBP26.05■■□□□ 1.76
CPSF7-209ENST00000463244 ZNF521Q96K83 1311 aa26.05■■□□□ 1.76
CPSF7-209ENST00000463244 FGFR2P21802 821 aa26.04■■□□□ 1.76
CPSF7-209ENST00000463244 PPIL2Q13356 520 aa26.04■■□□□ 1.76
CPSF7-209ENST00000463244 SNAPC2Q13487 334 aa26.04■■□□□ 1.76
CPSF7-209ENST00000463244 PUM3Q15397 648 aaKnown RBP26.04■■□□□ 1.76
CPSF7-209ENST00000463244 FAM9BQ8IZU0 186 aa26.04■■□□□ 1.76
CPSF7-209ENST00000463244 LACTBP83111 547 aaPredicted RBP26.03■■□□□ 1.76
CPSF7-209ENST00000463244 DCAF15Q66K64 600 aa26.03■■□□□ 1.76
CPSF7-209ENST00000463244 ARHGAP39Q9C0H5 1083 aa26.03■■□□□ 1.76
CPSF7-209ENST00000463244 PTPRCP08575 1304 aa26.03■■□□□ 1.76
CPSF7-209ENST00000463244 IFIT1P09914 478 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms