RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 COL13A1Q5TAT6 717 aaPredicted RBP16.21■□□□□ 0.19
HDAC1-203ENST00000463172 ZGPATQ8N5A5 531 aaKnown RBP16.21■□□□□ 0.19
HDAC1-203ENST00000463172 PRMT6Q96LA8 375 aaPredicted RBP16.21■□□□□ 0.19
HDAC1-203ENST00000463172 MRIQ9BWK5 157 aa16.21■□□□□ 0.19
HDAC1-203ENST00000463172 DENND2AQ9ULE3 1009 aa16.21■□□□□ 0.19
HDAC1-203ENST00000463172 SCAF8Q9UPN6 1271 aaKnown RBP16.21■□□□□ 0.19
HDAC1-203ENST00000463172 AKAP11Q9UKA4 1901 aa16.21■□□□□ 0.19
HDAC1-203ENST00000463172 CLRN2A0PK11 232 aa16.2■□□□□ 0.18
HDAC1-203ENST00000463172 SLC10A3P09131 477 aa16.2■□□□□ 0.18
HDAC1-203ENST00000463172 LBX1P52954 281 aa16.2■□□□□ 0.18
HDAC1-203ENST00000463172 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
HDAC1-203ENST00000463172 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
HDAC1-203ENST00000463172 PRAMEF18Q5VWM3 479 aa16.2■□□□□ 0.18
HDAC1-203ENST00000463172 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
HDAC1-203ENST00000463172 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
HDAC1-203ENST00000463172 GORABQ5T7V8 394 aa16.19■□□□□ 0.18
HDAC1-203ENST00000463172 CHMP4BQ9H444 224 aaKnown RBP16.19■□□□□ 0.18
HDAC1-203ENST00000463172 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
HDAC1-203ENST00000463172 UNCXA6NJT0 531 aa16.18■□□□□ 0.18
HDAC1-203ENST00000463172 FAM155AB1AL88 458 aaPredicted RBP16.18■□□□□ 0.18
HDAC1-203ENST00000463172 UBE2Q2LH0YL09 131 aa16.18■□□□□ 0.18
HDAC1-203ENST00000463172 ZBTB22O15209 634 aa16.18■□□□□ 0.18
HDAC1-203ENST00000463172 HSPA8P11142 646 aaKnown RBP16.18■□□□□ 0.18
HDAC1-203ENST00000463172 IREB2P48200 963 aaKnown RBP16.18■□□□□ 0.18
HDAC1-203ENST00000463172 KIF23Q02241 960 aaPredicted RBP16.18■□□□□ 0.18
HDAC1-203ENST00000463172 HHIPL2Q6UWX4 724 aa16.18■□□□□ 0.18
HDAC1-203ENST00000463172 HOOK2Q96ED9 719 aa16.18■□□□□ 0.18
HDAC1-203ENST00000463172 TDRD3Q9H7E2 651 aaKnown RBP16.18■□□□□ 0.18
HDAC1-203ENST00000463172 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
HDAC1-203ENST00000463172 A0A1B0GUL7 405 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
HDAC1-203ENST00000463172 TFCP2Q12800 502 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 PRKG1Q13976 671 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 RASA3Q14644 834 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 RASAL3Q86YV0 1011 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 SLF2Q8IX21 1173 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 ZDHHC15Q96MV8 337 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 NEUROD6Q96NK8 337 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 SAGE1Q9NXZ1 904 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 PCDHAC2Q9Y5I4 1007 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
HDAC1-203ENST00000463172 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
HDAC1-203ENST00000463172 ATP8B2P98198 1209 aa16.16■□□□□ 0.18
HDAC1-203ENST00000463172 SPTY2D1Q68D10 685 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-203ENST00000463172 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-203ENST00000463172 PDS5AQ29RF7 1337 aaKnown RBP16.16■□□□□ 0.18
HDAC1-203ENST00000463172 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
HDAC1-203ENST00000463172 PHKA1P46020 1223 aa16.15■□□□□ 0.18
HDAC1-203ENST00000463172 TIMM10P62072 90 aa16.15■□□□□ 0.18
HDAC1-203ENST00000463172 SREBF2Q12772 1141 aa16.15■□□□□ 0.18
HDAC1-203ENST00000463172 MOB2Q70IA6 237 aa16.15■□□□□ 0.18
HDAC1-203ENST00000463172 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
HDAC1-203ENST00000463172 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
HDAC1-203ENST00000463172 TCP10L2B9ZVM9 353 aa16.14■□□□□ 0.17
HDAC1-203ENST00000463172 SURF6O75683 361 aaKnown RBP16.14■□□□□ 0.17
HDAC1-203ENST00000463172 POLA2Q14181 598 aa16.14■□□□□ 0.17
HDAC1-203ENST00000463172 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
HDAC1-203ENST00000463172 FKBP1CQ5VVH2 108 aa16.14■□□□□ 0.17
HDAC1-203ENST00000463172 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
HDAC1-203ENST00000463172 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
HDAC1-203ENST00000463172 SLC10A4Q96EP9 437 aa16.14■□□□□ 0.17
HDAC1-203ENST00000463172 DDX19BQ9UMR2 479 aa16.14■□□□□ 0.17
HDAC1-203ENST00000463172 UQCRFS1P1P0C7P4 283 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 RLBP1P12271 317 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 ADORA1P30542 326 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 GRIK5Q16478 980 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 LDLRAD1Q5T700 205 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 NBPF12Q5TAG4 269 aaPredicted RBP16.13■□□□□ 0.17
HDAC1-203ENST00000463172 FAM83AQ86UY5 434 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 GPR108Q9NPR9 543 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
HDAC1-203ENST00000463172 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 RASGRF1Q13972 1273 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 HSP90AB4PQ58FF6 505 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 CCDC158Q5M9N0 1113 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 ERC1Q8IUD2 1116 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 PANK1Q8TE04 598 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 CSRNP1Q96S65 589 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 ZIC5Q96T25 663 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 ABCF2Q9UG63 623 aa16.12■□□□□ 0.17
HDAC1-203ENST00000463172 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
HDAC1-203ENST00000463172 PRDX5P30044 214 aa16.11■□□□□ 0.17
HDAC1-203ENST00000463172 INHBEP58166 350 aa16.11■□□□□ 0.17
HDAC1-203ENST00000463172 DCAF15Q66K64 600 aa16.11■□□□□ 0.17
HDAC1-203ENST00000463172 APOBEC3HQ6NTF7 200 aaKnown RBP16.11■□□□□ 0.17
HDAC1-203ENST00000463172 ERICH6Q7L0X2 663 aa16.11■□□□□ 0.17
HDAC1-203ENST00000463172 TSKSQ9UJT2 592 aa16.11■□□□□ 0.17
HDAC1-203ENST00000463172 MANSC4A6NHS7 340 aaPredicted RBP16.1■□□□□ 0.17
HDAC1-203ENST00000463172 HMMRO75330 724 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 TRPA1O75762 1119 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 GSTO1P78417 241 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 RNF186Q9NXI6 227 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
HDAC1-203ENST00000463172 DAGLAQ9Y4D2 1042 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 612.7 ms