RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 TMEM39BQ9GZU3 492 aa16.41■□□□□ 0.22
COL4A2-204ENST00000463084 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
COL4A2-204ENST00000463084 EFCC1Q9HA90 598 aa16.41■□□□□ 0.22
COL4A2-204ENST00000463084 WDHD1O75717 1129 aaPredicted RBP16.4■□□□□ 0.22
COL4A2-204ENST00000463084 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
COL4A2-204ENST00000463084 SP3Q02447 781 aa16.4■□□□□ 0.22
COL4A2-204ENST00000463084 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
COL4A2-204ENST00000463084 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
COL4A2-204ENST00000463084 CCL15-CCL14A0A0B4J2E2 113 aa16.39■□□□□ 0.21
COL4A2-204ENST00000463084 CACNB3P54284 484 aa16.39■□□□□ 0.21
COL4A2-204ENST00000463084 CCL15Q16663 113 aa16.39■□□□□ 0.21
COL4A2-204ENST00000463084 LRRC24Q50LG9 513 aa16.39■□□□□ 0.21
COL4A2-204ENST00000463084 CDAN1Q8IWY9 1227 aa16.39■□□□□ 0.21
COL4A2-204ENST00000463084 TBC1D22AQ8WUA7 517 aa16.39■□□□□ 0.21
COL4A2-204ENST00000463084 TEKT1Q969V4 418 aa16.39■□□□□ 0.21
COL4A2-204ENST00000463084 GTF2A2P52657 109 aa16.38■□□□□ 0.21
COL4A2-204ENST00000463084 MAP3K9P80192 1104 aa16.38■□□□□ 0.21
COL4A2-204ENST00000463084 VGLL4Q14135 290 aa16.38■□□□□ 0.21
COL4A2-204ENST00000463084 ARHGEF6Q15052 776 aa16.38■□□□□ 0.21
COL4A2-204ENST00000463084 INTS3Q68E01 1043 aaKnown RBP16.38■□□□□ 0.21
COL4A2-204ENST00000463084 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
COL4A2-204ENST00000463084 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
COL4A2-204ENST00000463084 A0A1B0GUL6 1792 aa16.37■□□□□ 0.21
COL4A2-204ENST00000463084 IFIT1P09914 478 aaKnown RBP16.37■□□□□ 0.21
COL4A2-204ENST00000463084 PTPN18Q99952 460 aa16.37■□□□□ 0.21
COL4A2-204ENST00000463084 PTPN22Q9Y2R2 807 aa16.37■□□□□ 0.21
COL4A2-204ENST00000463084 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
COL4A2-204ENST00000463084 CACNA1FO60840 1977 aa16.37■□□□□ 0.21
COL4A2-204ENST00000463084 POTEFA5A3E0 1075 aa16.36■□□□□ 0.21
COL4A2-204ENST00000463084 ECM2O94769 699 aaPredicted RBP16.36■□□□□ 0.21
COL4A2-204ENST00000463084 MYCP01106 439 aaPredicted RBP16.36■□□□□ 0.21
COL4A2-204ENST00000463084 BCAMP50895 628 aa16.36■□□□□ 0.21
COL4A2-204ENST00000463084 GRIK5Q16478 980 aa16.36■□□□□ 0.21
COL4A2-204ENST00000463084 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.36■□□□□ 0.21
COL4A2-204ENST00000463084 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
COL4A2-204ENST00000463084 WRNIP1Q96S55 665 aa16.36■□□□□ 0.21
COL4A2-204ENST00000463084 TMEM106CQ9BVX2 250 aa16.36■□□□□ 0.21
COL4A2-204ENST00000463084 MAST3O60307 1309 aa16.36■□□□□ 0.21
COL4A2-204ENST00000463084 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 PDE8BO95263 885 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 KIF22Q14807 665 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 FBXO33Q7Z6M2 555 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 HOOK2Q96ED9 719 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 KAZALD1Q96I82 304 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 TEPSINQ96N21 525 aa16.35■□□□□ 0.21
COL4A2-204ENST00000463084 SLC5A1P13866 664 aa16.34■□□□□ 0.21
COL4A2-204ENST00000463084 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
COL4A2-204ENST00000463084 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
COL4A2-204ENST00000463084 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
COL4A2-204ENST00000463084 MRPL50Q8N5N7 158 aaKnown RBP16.34■□□□□ 0.21
COL4A2-204ENST00000463084 ANKRD44Q8N8A2 993 aa16.34■□□□□ 0.21
COL4A2-204ENST00000463084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL4A2-204ENST00000463084 PCDH10Q9P2E7 1040 aa16.34■□□□□ 0.21
COL4A2-204ENST00000463084 TESPA1A2RU30 521 aaPredicted RBP16.33■□□□□ 0.2
COL4A2-204ENST00000463084 CETPP11597 493 aa16.33■□□□□ 0.2
COL4A2-204ENST00000463084 HDLBPQ00341 1268 aaKnown RBP16.33■□□□□ 0.2
COL4A2-204ENST00000463084 DCAF15Q66K64 600 aa16.33■□□□□ 0.2
COL4A2-204ENST00000463084 NBPF11Q86T75 865 aa16.33■□□□□ 0.2
COL4A2-204ENST00000463084 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
COL4A2-204ENST00000463084 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
COL4A2-204ENST00000463084 MS4A4AQ96JQ5 239 aa16.33■□□□□ 0.2
COL4A2-204ENST00000463084 PTPRCP08575 1304 aa16.33■□□□□ 0.2
COL4A2-204ENST00000463084 UTYO14607 1347 aa16.32■□□□□ 0.2
COL4A2-204ENST00000463084 RABL6Q3YEC7 729 aaPredicted RBP16.32■□□□□ 0.2
COL4A2-204ENST00000463084 ZKSCAN4Q969J2 545 aaPredicted RBP16.32■□□□□ 0.2
COL4A2-204ENST00000463084 TNRC18O15417 2968 aaPredicted RBP16.31■□□□□ 0.2
COL4A2-204ENST00000463084 SPDYE5A6NIY4 337 aa16.31■□□□□ 0.2
COL4A2-204ENST00000463084 EN2P19622 333 aaPredicted RBP16.31■□□□□ 0.2
COL4A2-204ENST00000463084 SNAPC2Q13487 334 aa16.31■□□□□ 0.2
COL4A2-204ENST00000463084 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
COL4A2-204ENST00000463084 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
COL4A2-204ENST00000463084 ZDHHC15Q96MV8 337 aa16.31■□□□□ 0.2
COL4A2-204ENST00000463084 SIL1Q9H173 461 aa16.31■□□□□ 0.2
COL4A2-204ENST00000463084 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
COL4A2-204ENST00000463084 E9PSI1 815 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 TCP10Q12799 353 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 MIER1Q8N108 512 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 VGLL2Q8N8G2 317 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 ZNF341Q9BYN7 854 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 SMC4Q9NTJ3 1288 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 SNCAIPQ9Y6H5 919 aa16.3■□□□□ 0.2
COL4A2-204ENST00000463084 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
COL4A2-204ENST00000463084 ARAP2Q8WZ64 1704 aa16.29■□□□□ 0.2
COL4A2-204ENST00000463084 EYA2O00167 538 aa16.29■□□□□ 0.2
COL4A2-204ENST00000463084 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
COL4A2-204ENST00000463084 LPIN2Q92539 896 aa16.29■□□□□ 0.2
COL4A2-204ENST00000463084 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
COL4A2-204ENST00000463084 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
COL4A2-204ENST00000463084 BTBD19C9JJ37 291 aa16.28■□□□□ 0.2
COL4A2-204ENST00000463084 IRF6O14896 467 aa16.28■□□□□ 0.2
COL4A2-204ENST00000463084 UBTFL1P0CB47 393 aaPredicted RBP16.28■□□□□ 0.2
COL4A2-204ENST00000463084 PPIL2Q13356 520 aa16.28■□□□□ 0.2
COL4A2-204ENST00000463084 APOBEC3HQ6NTF7 200 aaKnown RBP16.28■□□□□ 0.2
COL4A2-204ENST00000463084 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
COL4A2-204ENST00000463084 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
COL4A2-204ENST00000463084 LDHBP07195 334 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms