RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 SMAPO00193 183 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 FKTNO75072 461 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 ALDH1A1P00352 501 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 ATP2B4P23634 1241 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 INHBEP58166 350 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 CCDC152Q4G0S7 254 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-212ENST00000463005 RIC3Q7Z5B4 369 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 OGFOD1Q8N543 542 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 XDHP47989 1333 aa10.3□□□□□ -0.76
GARNL3-212ENST00000463005 PDE8AO60658 829 aa10.29□□□□□ -0.76
GARNL3-212ENST00000463005 OATP04181 439 aa10.29□□□□□ -0.76
GARNL3-212ENST00000463005 PTPREP23469 700 aa10.29□□□□□ -0.76
GARNL3-212ENST00000463005 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
GARNL3-212ENST00000463005 CCDC191Q8NCU4 936 aa10.29□□□□□ -0.76
GARNL3-212ENST00000463005 ZNF428Q96B54 188 aa10.29□□□□□ -0.76
GARNL3-212ENST00000463005 SEC31BQ9NQW1 1179 aa10.29□□□□□ -0.76
GARNL3-212ENST00000463005 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-212ENST00000463005 LAS1LQ9Y4W2 734 aaKnown RBP10.29□□□□□ -0.76
GARNL3-212ENST00000463005 MYO3BQ8WXR4 1341 aa10.29□□□□□ -0.76
GARNL3-212ENST00000463005 PPP1R3GB7ZBB8 358 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 SNPHO15079 494 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 PCCAP05165 728 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-212ENST00000463005 PSEN2P49810 448 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 KRT24Q2M2I5 525 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 NUDT18Q6ZVK8 323 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 MOB2Q70IA6 237 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 ARMC9Q7Z3E5 817 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 ANKRD18AQ8IVF6 992 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 RBM27Q9P2N5 1060 aaKnown RBP10.28□□□□□ -0.76
GARNL3-212ENST00000463005 COL4A1P02462 1669 aa10.28□□□□□ -0.76
GARNL3-212ENST00000463005 WNT10BO00744 389 aa10.27□□□□□ -0.77
GARNL3-212ENST00000463005 NBPF9Q3BBW0 867 aa10.27□□□□□ -0.77
GARNL3-212ENST00000463005 STRIP1Q5VSL9 837 aa10.27□□□□□ -0.77
GARNL3-212ENST00000463005 CDC5LQ99459 802 aaKnown RBP10.27□□□□□ -0.77
GARNL3-212ENST00000463005 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
GARNL3-212ENST00000463005 MYH3P11055 1940 aa10.27□□□□□ -0.77
GARNL3-212ENST00000463005 RCCD1A6NED2 376 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 MANSC4A6NHS7 340 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-212ENST00000463005 PTPN12Q05209 780 aaKnown RBP10.26□□□□□ -0.77
GARNL3-212ENST00000463005 RALBP1Q15311 655 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 LDLRAD1Q5T700 205 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 PRAMEF18Q5VWM3 479 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 LHX8Q68G74 356 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 APOBEC3FQ8IUX4 373 aaKnown RBP10.26□□□□□ -0.77
GARNL3-212ENST00000463005 RUNDC1Q96C34 613 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 COA1Q9GZY4 146 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 CWC25Q9NXE8 425 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-212ENST00000463005 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
GARNL3-212ENST00000463005 RBBP6Q7Z6E9 1792 aaKnown RBP10.25□□□□□ -0.77
GARNL3-212ENST00000463005 UNCXA6NJT0 531 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 HABP4Q5JVS0 413 aaKnown RBP10.25□□□□□ -0.77
GARNL3-212ENST00000463005 DACT2Q5SW24 774 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 SPRYD7Q5W111 196 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 POTEEQ6S8J3 1075 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 MYD88Q99836 296 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 BSDC1Q9NW68 430 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-212ENST00000463005 PNMA3Q9UL41 463 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 LEMD3Q9Y2U8 911 aa10.25□□□□□ -0.77
GARNL3-212ENST00000463005 LAMB1P07942 1786 aa10.24□□□□□ -0.77
GARNL3-212ENST00000463005 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
GARNL3-212ENST00000463005 DDX58O95786 925 aaKnown RBP10.24□□□□□ -0.77
GARNL3-212ENST00000463005 CCT4P50991 539 aaKnown RBP10.24□□□□□ -0.77
GARNL3-212ENST00000463005 MAP3K11Q16584 847 aa10.24□□□□□ -0.77
GARNL3-212ENST00000463005 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
GARNL3-212ENST00000463005 TTLL5Q6EMB2 1281 aa10.24□□□□□ -0.77
GARNL3-212ENST00000463005 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-212ENST00000463005 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
GARNL3-212ENST00000463005 METTL22Q9BUU2 404 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-212ENST00000463005 PHAXQ9H814 394 aaKnown RBP10.24□□□□□ -0.77
GARNL3-212ENST00000463005 MINPP1Q9UNW1 487 aa10.24□□□□□ -0.77
GARNL3-212ENST00000463005 SCAF8Q9UPN6 1271 aaKnown RBP10.24□□□□□ -0.77
GARNL3-212ENST00000463005 TRIM17Q9Y577 477 aa10.24□□□□□ -0.77
GARNL3-212ENST00000463005 ZNF646O15015 1829 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-212ENST00000463005 KIAA0100Q14667 2235 aaKnown RBP10.23□□□□□ -0.77
GARNL3-212ENST00000463005 PPP1R12BO60237 982 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-212ENST00000463005 ZBTB48P10074 688 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-212ENST00000463005 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
GARNL3-212ENST00000463005 TATDN2Q93075 761 aa10.23□□□□□ -0.77
GARNL3-212ENST00000463005 ERO1AQ96HE7 468 aa10.23□□□□□ -0.77
GARNL3-212ENST00000463005 CCDC85AQ96PX6 553 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-212ENST00000463005 R3HDMLQ9H3Y0 253 aa10.23□□□□□ -0.77
GARNL3-212ENST00000463005 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
GARNL3-212ENST00000463005 ANGEL1Q9UNK9 670 aaKnown RBP10.23□□□□□ -0.77
GARNL3-212ENST00000463005 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
GARNL3-212ENST00000463005 COL1A1P02452 1464 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-212ENST00000463005 SPEF2Q9C093 1822 aa10.22□□□□□ -0.77
GARNL3-212ENST00000463005 OTOP1Q7RTM1 612 aa10.22□□□□□ -0.77
GARNL3-212ENST00000463005 CCDC146Q8IYE0 955 aa10.22□□□□□ -0.77
GARNL3-212ENST00000463005 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
GARNL3-212ENST00000463005 ZBED3Q96IU2 234 aaPredicted RBP10.22□□□□□ -0.77
GARNL3-212ENST00000463005 ANKRD2Q9GZV1 360 aa10.22□□□□□ -0.77
GARNL3-212ENST00000463005 PRKRIP1Q9H875 184 aaPredicted RBP10.22□□□□□ -0.77
GARNL3-212ENST00000463005 MBIPQ9NS73 344 aa10.22□□□□□ -0.77
GARNL3-212ENST00000463005 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
GARNL3-212ENST00000463005 PTPN22Q9Y2R2 807 aa10.22□□□□□ -0.77
GARNL3-212ENST00000463005 PPP2R3BQ9Y5P8 575 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms