RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 ZNF408Q9H9D4 720 aa19.5■□□□□ 0.71
ERCC3-206ENST00000462306 TLR7Q9NYK1 1049 aaKnown RBP19.5■□□□□ 0.71
ERCC3-206ENST00000462306 HMG20BQ9P0W2 317 aa19.5■□□□□ 0.71
ERCC3-206ENST00000462306 DBNLQ9UJU6 430 aaKnown RBP19.5■□□□□ 0.71
ERCC3-206ENST00000462306 MAST3O60307 1309 aa19.5■□□□□ 0.71
ERCC3-206ENST00000462306 PRDX5P30044 214 aa19.49■□□□□ 0.71
ERCC3-206ENST00000462306 PI16Q6UXB8 463 aa19.49■□□□□ 0.71
ERCC3-206ENST00000462306 APOBEC3FQ8IUX4 373 aaKnown RBP19.49■□□□□ 0.71
ERCC3-206ENST00000462306 CCDC8Q9H0W5 538 aaPredicted RBP19.49■□□□□ 0.71
ERCC3-206ENST00000462306 CNTNAP1P78357 1384 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 CLRN2A0PK11 232 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 RASSF10A6NK89 507 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 MYO1BO43795 1136 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 UQCRFS1P1P0C7P4 283 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 MCAMP43121 646 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 SPATA5Q8NB90 893 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 TEKT1Q969V4 418 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 KIF1BPQ96EK5 621 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 ZDHHC15Q96MV8 337 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 IL1RAPL2Q9NP60 686 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 MKRN1Q9UHC7 482 aaKnown RBP19.48■□□□□ 0.71
ERCC3-206ENST00000462306 ABT1Q9ULW3 272 aaKnown RBP19.48■□□□□ 0.71
ERCC3-206ENST00000462306 PCDHB15Q9Y5E8 787 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 TLL2Q9Y6L7 1015 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 ECM29Q5VYK3 1845 aa19.48■□□□□ 0.71
ERCC3-206ENST00000462306 APBB1O00213 710 aa19.47■□□□□ 0.71
ERCC3-206ENST00000462306 LDHBP07195 334 aaKnown RBP19.47■□□□□ 0.71
ERCC3-206ENST00000462306 SPDYE2Q495Y8 402 aa19.47■□□□□ 0.71
ERCC3-206ENST00000462306 CCDC158Q5M9N0 1113 aa19.47■□□□□ 0.71
ERCC3-206ENST00000462306 PRAMEF18Q5VWM3 479 aa19.47■□□□□ 0.71
ERCC3-206ENST00000462306 HHIPL2Q6UWX4 724 aa19.47■□□□□ 0.71
ERCC3-206ENST00000462306 SAPCD2Q86UD0 394 aa19.47■□□□□ 0.71
ERCC3-206ENST00000462306 ZGPATQ8N5A5 531 aaKnown RBP19.47■□□□□ 0.71
ERCC3-206ENST00000462306 ZNF512BQ96KM6 892 aaPredicted RBP19.47■□□□□ 0.71
ERCC3-206ENST00000462306 TDRD3Q9H7E2 651 aaKnown RBP19.47■□□□□ 0.71
ERCC3-206ENST00000462306 ZNF70Q9UC06 446 aaPredicted RBP19.47■□□□□ 0.71
ERCC3-206ENST00000462306 DIXDC1Q155Q3 683 aa19.46■□□□□ 0.71
ERCC3-206ENST00000462306 TTC39AQ5SRH9 613 aa19.46■□□□□ 0.71
ERCC3-206ENST00000462306 APOBEC3HQ6NTF7 200 aaKnown RBP19.46■□□□□ 0.71
ERCC3-206ENST00000462306 AACSQ86V21 672 aa19.46■□□□□ 0.71
ERCC3-206ENST00000462306 DEFB115Q30KQ5 88 aa19.45■□□□□ 0.7
ERCC3-206ENST00000462306 JMYQ8N9B5 988 aa19.45■□□□□ 0.7
ERCC3-206ENST00000462306 DEFB129Q9H1M3 183 aa19.45■□□□□ 0.7
ERCC3-206ENST00000462306 GBA2Q9HCG7 927 aaPredicted RBP19.45■□□□□ 0.7
ERCC3-206ENST00000462306 ABCF2Q9UG63 623 aa19.45■□□□□ 0.7
ERCC3-206ENST00000462306 SPTY2D1Q68D10 685 aaPredicted RBP19.44■□□□□ 0.7
ERCC3-206ENST00000462306 TBC1D9Q6ZT07 1266 aa19.44■□□□□ 0.7
ERCC3-206ENST00000462306 CLASRPQ8N2M8 674 aaKnown RBP19.44■□□□□ 0.7
ERCC3-206ENST00000462306 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
ERCC3-206ENST00000462306 VEZTQ9HBM0 779 aa19.44■□□□□ 0.7
ERCC3-206ENST00000462306 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
ERCC3-206ENST00000462306 DAGLAQ9Y4D2 1042 aa19.44■□□□□ 0.7
ERCC3-206ENST00000462306 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
ERCC3-206ENST00000462306 AKAP11Q9UKA4 1901 aa19.43■□□□□ 0.7
ERCC3-206ENST00000462306 VEGFBP49765 207 aa19.43■□□□□ 0.7
ERCC3-206ENST00000462306 C2orf69Q8N8R5 385 aa19.43■□□□□ 0.7
ERCC3-206ENST00000462306 HHIPL1Q96JK4 782 aa19.43■□□□□ 0.7
ERCC3-206ENST00000462306 PPP2R3BQ9Y5P8 575 aa19.43■□□□□ 0.7
ERCC3-206ENST00000462306 ZNF384Q8TF68 577 aa19.42■□□□□ 0.7
ERCC3-206ENST00000462306 CYP2E1P05181 493 aaPredicted RBP19.41■□□□□ 0.7
ERCC3-206ENST00000462306 HUNKP57058 714 aa19.41■□□□□ 0.7
ERCC3-206ENST00000462306 MECOMQ03112 1051 aa19.41■□□□□ 0.7
ERCC3-206ENST00000462306 RASA3Q14644 834 aa19.41■□□□□ 0.7
ERCC3-206ENST00000462306 ERICH6Q7L0X2 663 aa19.41■□□□□ 0.7
ERCC3-206ENST00000462306 FAM163AQ96GL9 167 aaPredicted RBP19.41■□□□□ 0.7
ERCC3-206ENST00000462306 LRRCC1Q9C099 1032 aa19.41■□□□□ 0.7
ERCC3-206ENST00000462306 GAKO14976 1311 aa19.41■□□□□ 0.7
ERCC3-206ENST00000462306 TCP10L2B9ZVM9 353 aa19.4■□□□□ 0.7
ERCC3-206ENST00000462306 ZAP70P43403 619 aa19.4■□□□□ 0.7
ERCC3-206ENST00000462306 CACNB3P54284 484 aa19.4■□□□□ 0.7
ERCC3-206ENST00000462306 FKBP1BP68106 108 aa19.4■□□□□ 0.7
ERCC3-206ENST00000462306 TNFAIP1Q13829 316 aa19.4■□□□□ 0.7
ERCC3-206ENST00000462306 DZIP1Q86YF9 867 aaKnown RBP19.4■□□□□ 0.7
ERCC3-206ENST00000462306 PAPPA2Q9BXP8 1791 aa19.39■□□□□ 0.7
ERCC3-206ENST00000462306 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-206ENST00000462306 IFIT2P09913 472 aaKnown RBP19.39■□□□□ 0.69
ERCC3-206ENST00000462306 NF2P35240 595 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 AAMPQ13685 434 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 FKBP1CQ5VVH2 108 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 CYP4F22Q6NT55 531 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 CDC42EP5Q6NZY7 148 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 MOB2Q70IA6 237 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 NSUN4Q96CB9 384 aaKnown RBP19.39■□□□□ 0.69
ERCC3-206ENST00000462306 CAPNS2Q96L46 248 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 WDR33Q9C0J8 1336 aaKnown RBP19.39■□□□□ 0.69
ERCC3-206ENST00000462306 SSC5DA1L4H1 1573 aa19.39■□□□□ 0.69
ERCC3-206ENST00000462306 NBPF12Q5TAG4 269 aaPredicted RBP19.38■□□□□ 0.69
ERCC3-206ENST00000462306 SLF2Q8IX21 1173 aa19.38■□□□□ 0.69
ERCC3-206ENST00000462306 EXOC6Q8TAG9 804 aa19.38■□□□□ 0.69
ERCC3-206ENST00000462306 TEPSINQ96N21 525 aa19.38■□□□□ 0.69
ERCC3-206ENST00000462306 BCL11AQ9H165 835 aa19.38■□□□□ 0.69
ERCC3-206ENST00000462306 PIH1D3Q9NQM4 214 aaKnown RBP19.38■□□□□ 0.69
ERCC3-206ENST00000462306 RAI14Q9P0K7 980 aa19.38■□□□□ 0.69
ERCC3-206ENST00000462306 LRP2BPQ9P2M1 347 aa19.38■□□□□ 0.69
ERCC3-206ENST00000462306 MYH2Q9UKX2 1941 aa19.38■□□□□ 0.69
ERCC3-206ENST00000462306 MROH7-TTC4A0A0A0MT08 1334 aa19.37■□□□□ 0.69
ERCC3-206ENST00000462306 TNNI2P48788 182 aa19.37■□□□□ 0.69
ERCC3-206ENST00000462306 PAXIP1Q6ZW49 1069 aaPredicted RBP19.37■□□□□ 0.69
ERCC3-206ENST00000462306 CDAN1Q8IWY9 1227 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms