RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 IREB2P48200 963 aaKnown RBP9.53□□□□□ -0.88
CALD1-213ENST00000462181 PPP2R3AQ06190 1150 aa9.53□□□□□ -0.88
CALD1-213ENST00000462181 GPAT2Q6NUI2 795 aa9.53□□□□□ -0.88
CALD1-213ENST00000462181 UBASH3BQ8TF42 649 aa9.53□□□□□ -0.88
CALD1-213ENST00000462181 WFDC12Q8WWY7 111 aa9.53□□□□□ -0.88
CALD1-213ENST00000462181 TMEM39AQ9NV64 488 aa9.53□□□□□ -0.88
CALD1-213ENST00000462181 PPM1HQ9ULR3 514 aa9.53□□□□□ -0.88
CALD1-213ENST00000462181 F8W735 103 aaPredicted RBP9.52□□□□□ -0.89
CALD1-213ENST00000462181 SORBS3O60504 671 aa9.52□□□□□ -0.89
CALD1-213ENST00000462181 ALX3O95076 343 aa9.52□□□□□ -0.89
CALD1-213ENST00000462181 WISP1O95388 367 aa9.52□□□□□ -0.89
CALD1-213ENST00000462181 ITGB2P05107 769 aa9.52□□□□□ -0.89
CALD1-213ENST00000462181 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.52□□□□□ -0.89
CALD1-213ENST00000462181 TXNRD3Q86VQ6 643 aa9.52□□□□□ -0.89
CALD1-213ENST00000462181 CEP44Q9C0F1 390 aa9.52□□□□□ -0.89
CALD1-213ENST00000462181 MSTNO14793 375 aa9.51□□□□□ -0.89
CALD1-213ENST00000462181 POU4F3Q15319 338 aa9.51□□□□□ -0.89
CALD1-213ENST00000462181 TPTE2Q6XPS3 522 aa9.51□□□□□ -0.89
CALD1-213ENST00000462181 AGGF1Q8N302 714 aaeCLIP9.51□□□□□ -0.89
CALD1-213ENST00000462181 CORO1BQ9BR76 489 aa9.51□□□□□ -0.89
CALD1-213ENST00000462181 PODXL2Q9NZ53 605 aa9.51□□□□□ -0.89
CALD1-213ENST00000462181 TTF2Q9UNY4 1162 aaKnown RBP9.51□□□□□ -0.89
CALD1-213ENST00000462181 IGHA1P01876 353 aa9.5□□□□□ -0.89
CALD1-213ENST00000462181 ZNF16P17020 682 aaPredicted RBP9.5□□□□□ -0.89
CALD1-213ENST00000462181 NOS3P29474 1203 aa9.5□□□□□ -0.89
CALD1-213ENST00000462181 AP3B2Q13367 1082 aa9.5□□□□□ -0.89
CALD1-213ENST00000462181 KIAA1211Q6ZU35 1233 aa9.5□□□□□ -0.89
CALD1-213ENST00000462181 RUSC1Q9BVN2 902 aa9.5□□□□□ -0.89
CALD1-213ENST00000462181 VTI1BQ9UEU0 232 aa9.5□□□□□ -0.89
CALD1-213ENST00000462181 LOC100289279A0A1B0GTE1 492 aa9.49□□□□□ -0.89
CALD1-213ENST00000462181 FBXO24O75426 580 aa9.49□□□□□ -0.89
CALD1-213ENST00000462181 MAOBP27338 520 aa9.49□□□□□ -0.89
CALD1-213ENST00000462181 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
CALD1-213ENST00000462181 TRIM56Q9BRZ2 755 aaKnown RBP9.49□□□□□ -0.89
CALD1-213ENST00000462181 RNF208Q9H0X6 261 aa9.49□□□□□ -0.89
CALD1-213ENST00000462181 RGS22Q8NE09 1264 aa9.48□□□□□ -0.89
CALD1-213ENST00000462181 ANKRD24Q8TF21 1146 aa9.48□□□□□ -0.89
CALD1-213ENST00000462181 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
CALD1-213ENST00000462181 RBM47A0AV96 593 aaKnown RBP9.47□□□□□ -0.89
CALD1-213ENST00000462181 GLB1P16278 677 aa9.47□□□□□ -0.89
CALD1-213ENST00000462181 EXOSC6Q5RKV6 272 aaKnown RBP9.47□□□□□ -0.89
CALD1-213ENST00000462181 HP1BP3Q5SSJ5 553 aaPredicted RBP9.47□□□□□ -0.89
CALD1-213ENST00000462181 NRSN2Q9GZP1 204 aa9.47□□□□□ -0.89
CALD1-213ENST00000462181 MEGF11A6BM72 1044 aa9.46□□□□□ -0.9
CALD1-213ENST00000462181 NUTM2GQ5VZR2 741 aa9.46□□□□□ -0.9
CALD1-213ENST00000462181 CEP41Q9BYV8 373 aa9.46□□□□□ -0.9
CALD1-213ENST00000462181 SAMM50Q9Y512 469 aa9.46□□□□□ -0.9
CALD1-213ENST00000462181 ENC1O14682 589 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 DLGAP3O95886 979 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 PROCP04070 461 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 NME2P22392 152 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 PDE3AQ14432 1141 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 TAF1CQ15572 869 aaPredicted RBP9.45□□□□□ -0.9
CALD1-213ENST00000462181 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 SULF2Q8IWU5 870 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 EMILIN2Q9BXX0 1053 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 TMPRSS13Q9BYE2 586 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 CYP4F12Q9HCS2 524 aa9.45□□□□□ -0.9
CALD1-213ENST00000462181 SART1O43290 800 aaKnown RBP9.44□□□□□ -0.9
CALD1-213ENST00000462181 ECEL1O95672 775 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 CTSBP07858 339 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 GSTP1P09211 210 aaKnown RBP9.44□□□□□ -0.9
CALD1-213ENST00000462181 CTSHP09668 335 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 ARNTP27540 789 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 CCDC85BQ15834 202 aaPredicted RBP9.44□□□□□ -0.9
CALD1-213ENST00000462181 MEI1Q5TIA1 1274 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 FDX2Q6P4F2 183 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 CRELD1Q96HD1 420 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 MEGF10Q96KG7 1140 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 ZC3H12CQ9C0D7 883 aaKnown RBP9.44□□□□□ -0.9
CALD1-213ENST00000462181 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 RAD18Q9NS91 495 aa9.44□□□□□ -0.9
CALD1-213ENST00000462181 HNRNPUQ00839 825 aaKnown RBP eCLIP9.43□□□□□ -0.9
CALD1-213ENST00000462181 DOC2BQ14184 412 aa9.43□□□□□ -0.9
CALD1-213ENST00000462181 ANKRD34AQ69YU3 496 aa9.43□□□□□ -0.9
CALD1-213ENST00000462181 Q6ZS46 218 aa9.43□□□□□ -0.9
CALD1-213ENST00000462181 C12orf50Q8NA57 414 aaPredicted RBP9.43□□□□□ -0.9
CALD1-213ENST00000462181 KCNB2Q92953 911 aa9.43□□□□□ -0.9
CALD1-213ENST00000462181 TP53INP1Q96A56 240 aa9.43□□□□□ -0.9
CALD1-213ENST00000462181 USP31Q70CQ4 1352 aa9.42□□□□□ -0.9
CALD1-213ENST00000462181 PAGE1O75459 146 aa9.42□□□□□ -0.9
CALD1-213ENST00000462181 CELA3AP09093 270 aa9.42□□□□□ -0.9
CALD1-213ENST00000462181 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
CALD1-213ENST00000462181 STK35Q8TDR2 534 aa9.42□□□□□ -0.9
CALD1-213ENST00000462181 UBL7Q96S82 380 aaPredicted RBP9.42□□□□□ -0.9
CALD1-213ENST00000462181 TPSG1Q9NRR2 321 aa9.42□□□□□ -0.9
CALD1-213ENST00000462181 BMP6P22004 513 aa9.41□□□□□ -0.9
CALD1-213ENST00000462181 ST13P50502 369 aaKnown RBP9.41□□□□□ -0.9
CALD1-213ENST00000462181 MRPL58Q14197 206 aaKnown RBP9.41□□□□□ -0.9
CALD1-213ENST00000462181 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
CALD1-213ENST00000462181 SSBP4Q9BWG4 385 aaPredicted RBP9.41□□□□□ -0.9
CALD1-213ENST00000462181 SUGCTQ9HAC7 445 aa9.41□□□□□ -0.9
CALD1-213ENST00000462181 LIG1P18858 919 aa9.4□□□□□ -0.9
CALD1-213ENST00000462181 LRRC14Q15048 493 aa9.4□□□□□ -0.9
CALD1-213ENST00000462181 MAP1SQ66K74 1059 aaPredicted RBP9.4□□□□□ -0.9
CALD1-213ENST00000462181 PDZD3Q86UT5 571 aa9.4□□□□□ -0.9
CALD1-213ENST00000462181 CCDC86Q9H6F5 360 aaKnown RBP9.4□□□□□ -0.9
CALD1-213ENST00000462181 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
CALD1-213ENST00000462181 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
CALD1-213ENST00000462181 CYP8B1Q9UNU6 501 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms