RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PPP1R21Q6ZMI0 780 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 BCAP29Q9UHQ4 241 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 CETN3O15182 167 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 CCDC122Q5T0U0 273 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 MCUR1Q96AQ8 359 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 CUL4BQ13620 913 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 DTHD1Q6ZMT9 781 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 IQUBQ8NA54 791 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 RBM28Q9NW13 759 aaKnown RBP10.09□□□□□ -0.79
BRCA1-205ENST00000461221 UTP11Q9Y3A2 253 aaKnown RBP10.09□□□□□ -0.79
BRCA1-205ENST00000461221 EFCAB5A4FU69 1503 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 MAGEB6P1A0A0J9YX57 407 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 AKR1B15C9JRZ8 316 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-205ENST00000461221 SPOPO43791 374 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 RAPGEF1Q13905 1077 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 ATL3Q6DD88 541 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 TNNI2P48788 182 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 SYT10Q6XYQ8 523 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 HECW1Q76N89 1606 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 UBL4BQ8N7F7 174 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 EPRSP07814 1512 aaKnown RBP10.08□□□□□ -0.8
BRCA1-205ENST00000461221 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 BUB1BO60566 1050 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-205ENST00000461221 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 LGSNQ5TDP6 509 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 ZNF365Q70YC5 407 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 FNBP1Q96RU3 617 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 IL15P40933 162 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-205ENST00000461221 ESYT1Q9BSJ8 1104 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 GRIN2BQ13224 1484 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 KRT5P13647 590 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 NUCB1Q02818 461 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 PPP2R3AQ06190 1150 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 ARHGAP45Q92619 1136 aa10.08□□□□□ -0.8
BRCA1-205ENST00000461221 PRG4Q92954 1404 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-205ENST00000461221 PI4KAP2A4QPH2 592 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 PPFIA3O75145 1194 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 SV2BQ7L1I2 683 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 NME9Q86XW9 330 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 PI4KAP1Q8N8J0 262 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 I3L4J1 428 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 HDAC1Q13547 482 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-205ENST00000461221 DCAF17Q5H9S7 520 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-205ENST00000461221 C20orf194Q5TEA3 1177 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 C8orf74Q6P047 294 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 NOX5Q96PH1 765 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 VCX3AQ9NNX9 186 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 TTF2Q9UNY4 1162 aaKnown RBP10.07□□□□□ -0.8
BRCA1-205ENST00000461221 MGEA5O60502 916 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 SH3BGRP55822 239 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-205ENST00000461221 RUFY4Q6ZNE9 571 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 RNF34Q969K3 372 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 ERO1AQ96HE7 468 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 NAPGQ99747 312 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-205ENST00000461221 BAG1Q99933 345 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-205ENST00000461221 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 ARHGAP25P42331 645 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 PLCD1P51178 756 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 RSPH3Q86UC2 560 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 IFT20Q8IY31 132 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 ZNF131P52739 623 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 CLNS1AP54105 237 aaKnown RBP10.07□□□□□ -0.8
BRCA1-205ENST00000461221 PICALMQ13492 652 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 PLS1Q14651 629 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 SNX21Q969T3 373 aa10.07□□□□□ -0.8
BRCA1-205ENST00000461221 ELP1O95163 1332 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 TROQ12816 1431 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-205ENST00000461221 CALUO43852 315 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-205ENST00000461221 SDSP20132 328 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 STX17P56962 302 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 DNM1Q05193 864 aaKnown RBP10.06□□□□□ -0.8
BRCA1-205ENST00000461221 BIRC3Q13489 604 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 PLCB1Q9NQ66 1216 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 EXOC7Q9UPT5 735 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 NDUFAB1O14561 156 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 INPP5BP32019 993 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 MYL5Q02045 173 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 HHATQ5VTY9 493 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-205ENST00000461221 ARHGEF2Q92974 986 aaKnown RBP10.06□□□□□ -0.8
BRCA1-205ENST00000461221 HVCN1Q96D96 273 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 LRRC2Q9BYS8 371 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 SH2D4AQ9H788 454 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 BACH1O14867 736 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 DAPK3O43293 454 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 SMTNP53814 917 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 EVCP57679 992 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 MAP3K21Q5TCX8 1036 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 HPDP32754 393 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-205ENST00000461221 IRX4P78413 519 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 ASIC2Q16515 512 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 CCDC38Q502W7 563 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms