RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 BCAMP50895 628 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 PDE1AP54750 535 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 EIF6P56537 245 aaKnown RBP17.57■□□□□ 0.4
COL5A3-202ENST00000461214 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 PLEKHM2Q8IWE5 1019 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 NIM1KQ8IY84 436 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
COL5A3-202ENST00000461214 OTUD7AQ8TE49 926 aaPredicted RBP17.57■□□□□ 0.4
COL5A3-202ENST00000461214 CD209Q9NNX6 404 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 PDE4DIPQ5VU43 2346 aa17.56■□□□□ 0.4
COL5A3-202ENST00000461214 CIAPIN1Q6FI81 312 aa17.56■□□□□ 0.4
COL5A3-202ENST00000461214 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
COL5A3-202ENST00000461214 DENND2AQ9ULE3 1009 aa17.56■□□□□ 0.4
COL5A3-202ENST00000461214 TRPM7Q96QT4 1865 aa17.55■□□□□ 0.4
COL5A3-202ENST00000461214 CELF2O95319 508 aaKnown RBP17.55■□□□□ 0.4
COL5A3-202ENST00000461214 RASGRF1Q13972 1273 aa17.55■□□□□ 0.4
COL5A3-202ENST00000461214 PRPF38BQ5VTL8 546 aaKnown RBP17.55■□□□□ 0.4
COL5A3-202ENST00000461214 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
COL5A3-202ENST00000461214 ZNF408Q9H9D4 720 aa17.55■□□□□ 0.4
COL5A3-202ENST00000461214 DBNDD1Q9H9R9 158 aa17.55■□□□□ 0.4
COL5A3-202ENST00000461214 FAM205AQ6ZU69 1335 aa17.54■□□□□ 0.4
COL5A3-202ENST00000461214 MCAMP43121 646 aa17.54■□□□□ 0.4
COL5A3-202ENST00000461214 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
COL5A3-202ENST00000461214 ZNRF3Q9ULT6 936 aa17.54■□□□□ 0.4
COL5A3-202ENST00000461214 SALL1Q9NSC2 1324 aa17.53■□□□□ 0.4
COL5A3-202ENST00000461214 IGSF3O75054 1194 aa17.53■□□□□ 0.4
COL5A3-202ENST00000461214 FRAT2O75474 233 aaPredicted RBP17.53■□□□□ 0.4
COL5A3-202ENST00000461214 SCNN1DP51172 638 aa17.53■□□□□ 0.4
COL5A3-202ENST00000461214 SPATA5Q8NB90 893 aa17.53■□□□□ 0.4
COL5A3-202ENST00000461214 HAUS7Q99871 368 aa17.53■□□□□ 0.4
COL5A3-202ENST00000461214 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
COL5A3-202ENST00000461214 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.4
COL5A3-202ENST00000461214 FKBP1AP62942 108 aaKnown RBP17.52■□□□□ 0.4
COL5A3-202ENST00000461214 SCARF1Q14162 830 aa17.52■□□□□ 0.4
COL5A3-202ENST00000461214 DOK7Q18PE1 504 aa17.52■□□□□ 0.4
COL5A3-202ENST00000461214 USP50Q70EL3 339 aaPredicted RBP17.52■□□□□ 0.4
COL5A3-202ENST00000461214 ZGPATQ8N5A5 531 aaKnown RBP17.52■□□□□ 0.4
COL5A3-202ENST00000461214 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
COL5A3-202ENST00000461214 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
COL5A3-202ENST00000461214 YDJCA8MPS7 323 aa17.51■□□□□ 0.39
COL5A3-202ENST00000461214 TTF1Q15361 905 aaPredicted RBP17.51■□□□□ 0.39
COL5A3-202ENST00000461214 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
COL5A3-202ENST00000461214 STRIP1Q5VSL9 837 aa17.51■□□□□ 0.39
COL5A3-202ENST00000461214 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
COL5A3-202ENST00000461214 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
COL5A3-202ENST00000461214 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
COL5A3-202ENST00000461214 LAMB1P07942 1786 aa17.51■□□□□ 0.39
COL5A3-202ENST00000461214 ZIC5Q96T25 663 aa17.5■□□□□ 0.39
COL5A3-202ENST00000461214 GLIS2Q9BZE0 524 aaPredicted RBP17.5■□□□□ 0.39
COL5A3-202ENST00000461214 IQSEC3Q9UPP2 1182 aaPredicted RBP17.5■□□□□ 0.39
COL5A3-202ENST00000461214 LAMA4Q16363 1823 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 RGS3P49796 1198 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 BOLA2Q9H3K6 86 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 PAG1Q9NWQ8 432 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 SUGT1Q9Y2Z0 365 aa17.49■□□□□ 0.39
COL5A3-202ENST00000461214 MAST3O60307 1309 aa17.48■□□□□ 0.39
COL5A3-202ENST00000461214 DDX60LQ5H9U9 1706 aaKnown RBP17.48■□□□□ 0.39
COL5A3-202ENST00000461214 ZAP70P43403 619 aa17.48■□□□□ 0.39
COL5A3-202ENST00000461214 GTF2IP78347 998 aa17.48■□□□□ 0.39
COL5A3-202ENST00000461214 TNIP1Q15025 636 aa17.48■□□□□ 0.39
COL5A3-202ENST00000461214 DACT2Q5SW24 774 aa17.48■□□□□ 0.39
COL5A3-202ENST00000461214 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
COL5A3-202ENST00000461214 TMED8Q6PL24 325 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-202ENST00000461214 PI16Q6UXB8 463 aa17.48■□□□□ 0.39
COL5A3-202ENST00000461214 DNAJC2Q99543 621 aaKnown RBP17.48■□□□□ 0.39
COL5A3-202ENST00000461214 MYH1P12882 1939 aa17.47■□□□□ 0.39
COL5A3-202ENST00000461214 MYH8P13535 1937 aa17.47■□□□□ 0.39
COL5A3-202ENST00000461214 CYP2E1P05181 493 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-202ENST00000461214 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-202ENST00000461214 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
COL5A3-202ENST00000461214 MFSD14BQ5SR56 506 aa17.47■□□□□ 0.39
COL5A3-202ENST00000461214 SPTY2D1Q68D10 685 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-202ENST00000461214 GOLIM4O00461 696 aa17.46■□□□□ 0.39
COL5A3-202ENST00000461214 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
COL5A3-202ENST00000461214 GSPT1P15170 499 aaKnown RBP17.46■□□□□ 0.39
COL5A3-202ENST00000461214 RPS12P25398 132 aaKnown RBP17.46■□□□□ 0.39
COL5A3-202ENST00000461214 CXCL9Q07325 125 aa17.46■□□□□ 0.39
COL5A3-202ENST00000461214 SKAP1Q86WV1 359 aa17.46■□□□□ 0.39
COL5A3-202ENST00000461214 EVI5LQ96CN4 794 aa17.46■□□□□ 0.39
COL5A3-202ENST00000461214 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
COL5A3-202ENST00000461214 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
COL5A3-202ENST00000461214 PSMD14O00487 310 aa17.45■□□□□ 0.38
COL5A3-202ENST00000461214 MMP14P50281 582 aa17.45■□□□□ 0.38
COL5A3-202ENST00000461214 NOGQ13253 232 aa17.45■□□□□ 0.38
COL5A3-202ENST00000461214 LRRFIP1Q32MZ4 808 aaKnown RBP17.45■□□□□ 0.38
COL5A3-202ENST00000461214 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
COL5A3-202ENST00000461214 KBTBD3Q8NAB2 608 aa17.45■□□□□ 0.38
COL5A3-202ENST00000461214 AGBL3Q8NEM8 1001 aa17.45■□□□□ 0.38
COL5A3-202ENST00000461214 FBXW7Q969H0 707 aa17.45■□□□□ 0.38
COL5A3-202ENST00000461214 HHIPL1Q96JK4 782 aa17.45■□□□□ 0.38
COL5A3-202ENST00000461214 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL5A3-202ENST00000461214 BAZ2AQ9UIF9 1905 aaKnown RBP17.45■□□□□ 0.38
COL5A3-202ENST00000461214 RAD17O75943 681 aa17.44■□□□□ 0.38
COL5A3-202ENST00000461214 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
COL5A3-202ENST00000461214 POLR2AP24928 1970 aaKnown RBP17.43■□□□□ 0.38
COL5A3-202ENST00000461214 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms