RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TTF2Q9UNY4 1162 aaKnown RBP21.94■■□□□ 1.1
TOP3A-202ENST00000461127 DLL1O00548 723 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 CASP7P55210 303 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 MFSD14BQ5SR56 506 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 SLC17A8Q8NDX2 589 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 TEPSINQ96N21 525 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 HTATIP2Q9BUP3 242 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 ARHGAP39Q9C0H5 1083 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 CHMP3Q9Y3E7 222 aa21.93■■□□□ 1.1
TOP3A-202ENST00000461127 TCP10L2B9ZVM9 353 aa21.92■■□□□ 1.1
TOP3A-202ENST00000461127 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
TOP3A-202ENST00000461127 TMEM39BQ9GZU3 492 aa21.92■■□□□ 1.1
TOP3A-202ENST00000461127 FAM205AQ6ZU69 1335 aa21.91■■□□□ 1.1
TOP3A-202ENST00000461127 RANBP2P49792 3224 aaKnown RBP21.91■■□□□ 1.1
TOP3A-202ENST00000461127 SPDYE5A6NIY4 337 aa21.91■■□□□ 1.1
TOP3A-202ENST00000461127 SLC4A2P04920 1241 aa21.91■■□□□ 1.1
TOP3A-202ENST00000461127 SNAPC2Q13487 334 aa21.91■■□□□ 1.1
TOP3A-202ENST00000461127 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
TOP3A-202ENST00000461127 PLIN1O60240 522 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 HOXD10P28358 340 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 TAF7LQ5H9L4 462 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 G2E3Q7L622 706 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 ERO1BQ86YB8 467 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 CDAN1Q8IWY9 1227 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 DNAAF4Q8WXU2 420 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 NR2E3Q9Y5X4 410 aa21.9■■□□□ 1.1
TOP3A-202ENST00000461127 A0A1B0GUL6 1792 aa21.89■■□□□ 1.1
TOP3A-202ENST00000461127 MTFR1Q15390 333 aa21.89■■□□□ 1.09
TOP3A-202ENST00000461127 SHISA4Q96DD7 197 aa21.89■■□□□ 1.09
TOP3A-202ENST00000461127 BTBD19C9JJ37 291 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 CRKP46108 304 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 FLIIQ13045 1269 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
TOP3A-202ENST00000461127 FKBP5Q13451 457 aaPredicted RBP21.88■■□□□ 1.09
TOP3A-202ENST00000461127 TWISTNBQ3B726 338 aaPredicted RBP21.88■■□□□ 1.09
TOP3A-202ENST00000461127 LDHAL6AQ6ZMR3 332 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 RAET1EQ8TD07 263 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 HOOK2Q96ED9 719 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 CNNM1Q9NRU3 951 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 SRRDQ9UH36 339 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 ARAP2Q8WZ64 1704 aa21.88■■□□□ 1.09
TOP3A-202ENST00000461127 ZSWIM8A7E2V4 1837 aa21.87■■□□□ 1.09
TOP3A-202ENST00000461127 CCDC57Q2TAC2 916 aa21.87■■□□□ 1.09
TOP3A-202ENST00000461127 TDRD7Q8NHU6 1098 aaKnown RBP21.87■■□□□ 1.09
TOP3A-202ENST00000461127 WRNIP1Q96S55 665 aa21.87■■□□□ 1.09
TOP3A-202ENST00000461127 IRF6O14896 467 aa21.86■■□□□ 1.09
TOP3A-202ENST00000461127 HIBADHP31937 336 aaKnown RBP21.86■■□□□ 1.09
TOP3A-202ENST00000461127 GRK4P32298 578 aa21.86■■□□□ 1.09
TOP3A-202ENST00000461127 PSMC4P43686 418 aa21.86■■□□□ 1.09
TOP3A-202ENST00000461127 PPIL2Q13356 520 aa21.86■■□□□ 1.09
TOP3A-202ENST00000461127 TSR2Q969E8 191 aaKnown RBP21.86■■□□□ 1.09
TOP3A-202ENST00000461127 TMOD2Q9NZR1 351 aa21.86■■□□□ 1.09
TOP3A-202ENST00000461127 SNCAIPQ9Y6H5 919 aa21.86■■□□□ 1.09
TOP3A-202ENST00000461127 ECM2O94769 699 aaPredicted RBP21.85■■□□□ 1.09
TOP3A-202ENST00000461127 GJB1P08034 283 aa21.85■■□□□ 1.09
TOP3A-202ENST00000461127 GJA8P48165 433 aa21.85■■□□□ 1.09
TOP3A-202ENST00000461127 FOXO4P98177 505 aa21.85■■□□□ 1.09
TOP3A-202ENST00000461127 C17orf99Q6UX52 265 aa21.85■■□□□ 1.09
TOP3A-202ENST00000461127 TRIM47Q96LD4 638 aa21.85■■□□□ 1.09
TOP3A-202ENST00000461127 BIN2Q9UBW5 565 aaPredicted RBP21.85■■□□□ 1.09
TOP3A-202ENST00000461127 RIPOR2Q9Y4F9 1068 aa21.85■■□□□ 1.09
TOP3A-202ENST00000461127 FMNL1O95466 1100 aaPredicted RBP21.84■■□□□ 1.09
TOP3A-202ENST00000461127 UBXN2AP68543 259 aa21.84■■□□□ 1.09
TOP3A-202ENST00000461127 UBE4AQ14139 1066 aa21.84■■□□□ 1.09
TOP3A-202ENST00000461127 RNF208Q9H0X6 261 aa21.84■■□□□ 1.09
TOP3A-202ENST00000461127 A0A1W2PPC1 479 aa21.83■■□□□ 1.09
TOP3A-202ENST00000461127 CCL5P13501 91 aa21.83■■□□□ 1.09
TOP3A-202ENST00000461127 GYG1P46976 350 aa21.83■■□□□ 1.09
TOP3A-202ENST00000461127 HDLBPQ00341 1268 aaKnown RBP21.83■■□□□ 1.09
TOP3A-202ENST00000461127 DCAF15Q66K64 600 aa21.83■■□□□ 1.09
TOP3A-202ENST00000461127 LMBR1LQ6UX01 489 aa21.83■■□□□ 1.09
TOP3A-202ENST00000461127 ZKSCAN4Q969J2 545 aaPredicted RBP21.83■■□□□ 1.09
TOP3A-202ENST00000461127 PRO3102Q9H379 93 aa21.83■■□□□ 1.09
TOP3A-202ENST00000461127 CPA4Q9UI42 421 aa21.83■■□□□ 1.09
TOP3A-202ENST00000461127 MYPNQ86TC9 1320 aa21.82■■□□□ 1.08
TOP3A-202ENST00000461127 OSBPP22059 807 aa21.82■■□□□ 1.08
TOP3A-202ENST00000461127 UBE2Q1Q7Z7E8 422 aa21.82■■□□□ 1.08
TOP3A-202ENST00000461127 VPS37DQ86XT2 251 aa21.82■■□□□ 1.08
TOP3A-202ENST00000461127 TEKT1Q969V4 418 aa21.82■■□□□ 1.08
TOP3A-202ENST00000461127 ZNF594Q96JF6 807 aaPredicted RBP21.82■■□□□ 1.08
TOP3A-202ENST00000461127 PPATQ06203 517 aa21.81■■□□□ 1.08
TOP3A-202ENST00000461127 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
TOP3A-202ENST00000461127 ANKRD23Q86SG2 305 aa21.81■■□□□ 1.08
TOP3A-202ENST00000461127 FAM83AQ86UY5 434 aa21.81■■□□□ 1.08
TOP3A-202ENST00000461127 TBC1D22AQ8WUA7 517 aa21.81■■□□□ 1.08
TOP3A-202ENST00000461127 FAM84BQ96KN1 310 aaPredicted RBP21.81■■□□□ 1.08
TOP3A-202ENST00000461127 CACNA1FO60840 1977 aa21.8■■□□□ 1.08
TOP3A-202ENST00000461127 ZBTB7BO15156 539 aaPredicted RBP21.8■■□□□ 1.08
TOP3A-202ENST00000461127 FARP2O94887 1054 aaPredicted RBP21.8■■□□□ 1.08
TOP3A-202ENST00000461127 CACNB3P54284 484 aa21.8■■□□□ 1.08
TOP3A-202ENST00000461127 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.8■■□□□ 1.08
TOP3A-202ENST00000461127 A0A0C4DFX4 3053 aa21.79■■□□□ 1.08
TOP3A-202ENST00000461127 PDHXO00330 501 aa21.79■■□□□ 1.08
TOP3A-202ENST00000461127 FRAT2O75474 233 aaPredicted RBP21.79■■□□□ 1.08
TOP3A-202ENST00000461127 CTGFP29279 349 aa21.79■■□□□ 1.08
TOP3A-202ENST00000461127 FKBP1CQ5VVH2 108 aa21.79■■□□□ 1.08
TOP3A-202ENST00000461127 ZNF341Q9BYN7 854 aa21.79■■□□□ 1.08
TOP3A-202ENST00000461127 CUL9Q8IWT3 2517 aa21.78■■□□□ 1.08
TOP3A-202ENST00000461127 SLAIN1Q8ND83 568 aa21.78■■□□□ 1.08
TOP3A-202ENST00000461127 U2AF1L4Q8WU68 220 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms