RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 EFHC2Q5JST6 749 aa6.47□□□□□ -1.37
CNN3-204ENST00000461018 TBCELQ5QJ74 424 aa6.47□□□□□ -1.37
CNN3-204ENST00000461018 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
CNN3-204ENST00000461018 ZNF358Q9NW07 568 aa6.47□□□□□ -1.37
CNN3-204ENST00000461018 TFIP11Q9UBB9 837 aaKnown RBP6.47□□□□□ -1.37
CNN3-204ENST00000461018 PHF24Q9UPV7 400 aa6.47□□□□□ -1.37
CNN3-204ENST00000461018 BCS1LQ9Y276 419 aa6.47□□□□□ -1.37
CNN3-204ENST00000461018 RBM19Q9Y4C8 960 aaKnown RBP6.47□□□□□ -1.37
CNN3-204ENST00000461018 USP3Q9Y6I4 520 aa6.47□□□□□ -1.37
CNN3-204ENST00000461018 CTCFP49711 727 aaPredicted RBP6.46□□□□□ -1.38
CNN3-204ENST00000461018 ATP1A2P50993 1020 aa6.46□□□□□ -1.38
CNN3-204ENST00000461018 GRIN2CQ14957 1233 aa6.46□□□□□ -1.38
CNN3-204ENST00000461018 CCDC102BQ68D86 513 aa6.46□□□□□ -1.38
CNN3-204ENST00000461018 SPATA31E1Q6ZUB1 1445 aa6.46□□□□□ -1.38
CNN3-204ENST00000461018 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.38
CNN3-204ENST00000461018 ZNF594Q96JF6 807 aaPredicted RBP6.46□□□□□ -1.38
CNN3-204ENST00000461018 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.38
CNN3-204ENST00000461018 N4BP2Q86UW6 1770 aaPredicted RBP6.46□□□□□ -1.38
CNN3-204ENST00000461018 CDK2AP1O14519 115 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 HSPA8P11142 646 aaKnown RBP6.45□□□□□ -1.38
CNN3-204ENST00000461018 CLDN10P78369 228 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 NBPF1Q3BBV0 1214 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 NLRP13Q86W25 1043 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 OGFOD1Q8N543 542 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 SLC4A9Q96Q91 983 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 CCNL1Q9UK58 526 aaPredicted RBP6.45□□□□□ -1.38
CNN3-204ENST00000461018 KIAA1024Q9UPX6 916 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 KIAA1551Q9HCM1 1747 aa6.45□□□□□ -1.38
CNN3-204ENST00000461018 POLR3AO14802 1390 aaPredicted RBP6.44□□□□□ -1.38
CNN3-204ENST00000461018 NSD2O96028 1365 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 PPIP5K1Q6PFW1 1433 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 A6NJR5 290 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 C1QTNF9BB2RNN3 333 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 THBS1P07996 1170 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 TATP17735 454 aaPredicted RBP6.44□□□□□ -1.38
CNN3-204ENST00000461018 RASA1P20936 1047 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 AMPD1P23109 780 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 BICDL1Q6ZP65 573 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 PLEKHM2Q8IWE5 1019 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 GOLGA6L1Q8N7Z2 621 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 CDK19Q9BWU1 502 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 ZNF232Q9UNY5 417 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 GJA3Q9Y6H8 435 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 PXDNLA1KZ92 1463 aa6.44□□□□□ -1.38
CNN3-204ENST00000461018 TRPM1Q7Z4N2 1603 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 QRICH2Q9H0J4 1663 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 PALM3A6NDB9 673 aaPredicted RBP6.43□□□□□ -1.38
CNN3-204ENST00000461018 ZBTB7BO15156 539 aaPredicted RBP6.43□□□□□ -1.38
CNN3-204ENST00000461018 DPEP1P16444 411 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 LINC00114Q6XXX2 140 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 C1orf229Q6ZS94 237 aaPredicted RBP6.43□□□□□ -1.38
CNN3-204ENST00000461018 ARHGEF25Q86VW2 580 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 SLC9A9Q8IVB4 645 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 DDX54Q8TDD1 881 aaKnown RBP6.43□□□□□ -1.38
CNN3-204ENST00000461018 SYTL4Q96C24 671 aaPredicted RBP6.43□□□□□ -1.38
CNN3-204ENST00000461018 ABHD17AQ96GS6 310 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 RNF181Q9P0P0 153 aa6.43□□□□□ -1.38
CNN3-204ENST00000461018 SCHIP1Q9P0W5 487 aaPredicted RBP6.43□□□□□ -1.38
CNN3-204ENST00000461018 IQSEC3Q9UPP2 1182 aaPredicted RBP6.43□□□□□ -1.38
CNN3-204ENST00000461018 C10orf71Q711Q0 1435 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 LY75O60449 1722 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 A0A1W2PNR3 127 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 SFI1A8K8P3 1242 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 GNB5O14775 395 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 ATP4AP20648 1035 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 KCNA3P22001 575 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 LMOD1P29536 600 aaPredicted RBP6.42□□□□□ -1.38
CNN3-204ENST00000461018 MTFR1Q15390 333 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 CD163Q86VB7 1156 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 KRTAP1-3Q8IUG1 177 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 L3MBTL2Q969R5 705 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 PPP1R12CQ9BZL4 782 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 SEMA6BQ9H3T3 888 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 SUV39H2Q9H5I1 410 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 MAFBQ9Y5Q3 323 aaPredicted RBP6.42□□□□□ -1.38
CNN3-204ENST00000461018 KDM2BQ8NHM5 1336 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 PKD1L3Q7Z443 1732 aa6.42□□□□□ -1.38
CNN3-204ENST00000461018 SLIT3O75094 1523 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 ABCC6O95255 1503 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 DCDC2BA2VCK2 349 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 BNIP3LO60238 219 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 LGR5O75473 907 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 BMP4P12644 408 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 TXLNAP40222 546 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 LBRQ14739 615 aaKnown RBP6.41□□□□□ -1.38
CNN3-204ENST00000461018 LARGE2Q8N3Y3 721 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 TSEN2Q8NCE0 465 aaKnown RBP6.41□□□□□ -1.38
CNN3-204ENST00000461018 C1orf216Q8TAB5 229 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 ZCCHC2Q9C0B9 1178 aaKnown RBP6.41□□□□□ -1.38
CNN3-204ENST00000461018 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 NEUROD4Q9HD90 331 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 NOP53Q9NZM5 478 aaKnown RBP6.41□□□□□ -1.38
CNN3-204ENST00000461018 USP54Q70EL1 1684 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 CNTNAP1P78357 1384 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 SBF1O95248 1867 aa6.41□□□□□ -1.38
CNN3-204ENST00000461018 ADGRB1O14514 1584 aa6.4□□□□□ -1.38
CNN3-204ENST00000461018 TOGARAM1Q9Y4F4 1720 aa6.4□□□□□ -1.38
CNN3-204ENST00000461018 KHNYNO15037 678 aaKnown RBP6.4□□□□□ -1.38
CNN3-204ENST00000461018 ATXN7O15265 892 aaPredicted RBP6.4□□□□□ -1.38
CNN3-204ENST00000461018 IL2RBP14784 551 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms