RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
HDLBP-229ENST00000460826 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
HDLBP-229ENST00000460826 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
HDLBP-229ENST00000460826 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
HDLBP-229ENST00000460826 LDHBP07195 334 aaKnown RBP17.1■□□□□ 0.33
HDLBP-229ENST00000460826 NUCB1Q02818 461 aa17.1■□□□□ 0.33
HDLBP-229ENST00000460826 ZNF384Q8TF68 577 aa17.1■□□□□ 0.33
HDLBP-229ENST00000460826 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDLBP-229ENST00000460826 BOLA2Q9H3K6 86 aa17.1■□□□□ 0.33
HDLBP-229ENST00000460826 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
HDLBP-229ENST00000460826 PIH1D3Q9NQM4 214 aaKnown RBP17.1■□□□□ 0.33
HDLBP-229ENST00000460826 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
HDLBP-229ENST00000460826 MYH7P12883 1935 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 WNT10BO00744 389 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 ATP5JP18859 108 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 CRKP46108 304 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 MMP14P50281 582 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 DIXDC1Q155Q3 683 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
HDLBP-229ENST00000460826 CHADLQ6NUI6 762 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 ZGPATQ8N5A5 531 aaKnown RBP17.09■□□□□ 0.33
HDLBP-229ENST00000460826 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
HDLBP-229ENST00000460826 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 PGAP2Q9UHJ9 254 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 SERPINA10Q9UK55 444 aa17.09■□□□□ 0.33
HDLBP-229ENST00000460826 RBM5P52756 815 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDLBP-229ENST00000460826 DLGAP5Q15398 846 aa17.08■□□□□ 0.32
HDLBP-229ENST00000460826 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
HDLBP-229ENST00000460826 CHD1LQ86WJ1 897 aa17.08■□□□□ 0.32
HDLBP-229ENST00000460826 MTMR14Q8NCE2 650 aa17.08■□□□□ 0.32
HDLBP-229ENST00000460826 PRMT6Q96LA8 375 aaPredicted RBP17.08■□□□□ 0.32
HDLBP-229ENST00000460826 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.32
HDLBP-229ENST00000460826 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
HDLBP-229ENST00000460826 MAST3O60307 1309 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 MX1P20591 662 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
HDLBP-229ENST00000460826 MECOMQ03112 1051 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 SPTY2D1Q68D10 685 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-229ENST00000460826 SMC1BQ8NDV3 1235 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
HDLBP-229ENST00000460826 TEKT1Q969V4 418 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 GGA3Q9NZ52 723 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 RAI14Q9P0K7 980 aa17.07■□□□□ 0.32
HDLBP-229ENST00000460826 SCAF8Q9UPN6 1271 aaKnown RBP17.07■□□□□ 0.32
HDLBP-229ENST00000460826 GOLIM4O00461 696 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 ANGEL2Q5VTE6 544 aaKnown RBP17.06■□□□□ 0.32
HDLBP-229ENST00000460826 HHIPL2Q6UWX4 724 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 DLK2Q6UY11 383 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
HDLBP-229ENST00000460826 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
HDLBP-229ENST00000460826 HAUS7Q99871 368 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 MRIQ9BWK5 157 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 DAGLAQ9Y4D2 1042 aa17.06■□□□□ 0.32
HDLBP-229ENST00000460826 TRPM7Q96QT4 1865 aa17.05■□□□□ 0.32
HDLBP-229ENST00000460826 TTC41PQ6P2S7 1318 aa17.05■□□□□ 0.32
HDLBP-229ENST00000460826 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
HDLBP-229ENST00000460826 APOBEC3HQ6NTF7 200 aaKnown RBP17.05■□□□□ 0.32
HDLBP-229ENST00000460826 GPATCH3Q96I76 525 aa17.05■□□□□ 0.32
HDLBP-229ENST00000460826 ZDHHC15Q96MV8 337 aa17.05■□□□□ 0.32
HDLBP-229ENST00000460826 GLIS2Q9BZE0 524 aaPredicted RBP17.05■□□□□ 0.32
HDLBP-229ENST00000460826 STAP2Q9UGK3 403 aa17.05■□□□□ 0.32
HDLBP-229ENST00000460826 GAKO14976 1311 aa17.04■□□□□ 0.32
HDLBP-229ENST00000460826 CDK5RAP2Q96SN8 1893 aa17.04■□□□□ 0.32
HDLBP-229ENST00000460826 CLRN2A0PK11 232 aa17.04■□□□□ 0.32
HDLBP-229ENST00000460826 ITGBL1O95965 494 aaPredicted RBP17.04■□□□□ 0.32
HDLBP-229ENST00000460826 PDE4AP27815 886 aa17.04■□□□□ 0.32
HDLBP-229ENST00000460826 PDE1AP54750 535 aa17.04■□□□□ 0.32
HDLBP-229ENST00000460826 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
HDLBP-229ENST00000460826 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
HDLBP-229ENST00000460826 PAG1Q9NWQ8 432 aa17.04■□□□□ 0.32
HDLBP-229ENST00000460826 ADM5C9JUS6 153 aa17.03■□□□□ 0.32
HDLBP-229ENST00000460826 TRAF5O00463 557 aa17.03■□□□□ 0.32
HDLBP-229ENST00000460826 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
HDLBP-229ENST00000460826 FSTL1Q12841 308 aa17.03■□□□□ 0.32
HDLBP-229ENST00000460826 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
HDLBP-229ENST00000460826 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
HDLBP-229ENST00000460826 DCPSQ96C86 337 aaKnown RBP17.03■□□□□ 0.32
HDLBP-229ENST00000460826 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
HDLBP-229ENST00000460826 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
HDLBP-229ENST00000460826 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.32
HDLBP-229ENST00000460826 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
HDLBP-229ENST00000460826 C1QTNF8P60827 252 aa17.02■□□□□ 0.32
HDLBP-229ENST00000460826 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
HDLBP-229ENST00000460826 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
HDLBP-229ENST00000460826 ADGRA1Q86SQ6 560 aa17.02■□□□□ 0.32
HDLBP-229ENST00000460826 FAM163AQ96GL9 167 aaPredicted RBP17.02■□□□□ 0.32
HDLBP-229ENST00000460826 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.32
HDLBP-229ENST00000460826 AK9Q5TCS8 1911 aa17.02■□□□□ 0.31
HDLBP-229ENST00000460826 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
HDLBP-229ENST00000460826 ERC2O15083 957 aa17.01■□□□□ 0.31
HDLBP-229ENST00000460826 GLRX3O76003 335 aaKnown RBP17.01■□□□□ 0.31
HDLBP-229ENST00000460826 BTDP43251 543 aa17.01■□□□□ 0.31
HDLBP-229ENST00000460826 CACNB3P54284 484 aa17.01■□□□□ 0.31
HDLBP-229ENST00000460826 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
HDLBP-229ENST00000460826 NAA16Q6N069 864 aaPredicted RBP17.01■□□□□ 0.31
HDLBP-229ENST00000460826 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms