RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 WDR66Q8TBY9 1149 aa20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 PRMT6Q96LA8 375 aaPredicted RBP20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 GBA2Q9HCG7 927 aaPredicted RBP20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 SERPINA10Q9UK55 444 aa20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 SUGT1Q9Y2Z0 365 aa20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 PCDHAC2Q9Y5I4 1007 aa20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 SPDYE2BA6NHP3 402 aa20.32■□□□□ 0.84
SMARCD3-204ENST00000460431 SEMA3EO15041 775 aa20.32■□□□□ 0.84
SMARCD3-204ENST00000460431 SPDYE6P0CI01 402 aa20.32■□□□□ 0.84
SMARCD3-204ENST00000460431 NEUROD6Q96NK8 337 aa20.32■□□□□ 0.84
SMARCD3-204ENST00000460431 ZIC5Q96T25 663 aa20.32■□□□□ 0.84
SMARCD3-204ENST00000460431 BEGAINQ9BUH8 593 aa20.32■□□□□ 0.84
SMARCD3-204ENST00000460431 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
SMARCD3-204ENST00000460431 HDLBPQ00341 1268 aaKnown RBP20.31■□□□□ 0.84
SMARCD3-204ENST00000460431 OS9Q13438 667 aaPredicted RBP20.31■□□□□ 0.84
SMARCD3-204ENST00000460431 C2orf69Q8N8R5 385 aa20.31■□□□□ 0.84
SMARCD3-204ENST00000460431 MRIQ9BWK5 157 aa20.31■□□□□ 0.84
SMARCD3-204ENST00000460431 DENND2AQ9ULE3 1009 aa20.31■□□□□ 0.84
SMARCD3-204ENST00000460431 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
SMARCD3-204ENST00000460431 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
SMARCD3-204ENST00000460431 CDCA5Q96FF9 252 aa20.3■□□□□ 0.84
SMARCD3-204ENST00000460431 SCAF8Q9UPN6 1271 aaKnown RBP20.3■□□□□ 0.84
SMARCD3-204ENST00000460431 FAM155AB1AL88 458 aaPredicted RBP20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 MYO1BO43795 1136 aa20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 CRKP46108 304 aa20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 NOGQ13253 232 aa20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 RGMBQ6NW40 437 aa20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 TSKSQ9UJT2 592 aa20.29■□□□□ 0.84
SMARCD3-204ENST00000460431 SALL1Q9NSC2 1324 aa20.28■□□□□ 0.84
SMARCD3-204ENST00000460431 TNNI3KQ59H18 835 aa20.28■□□□□ 0.84
SMARCD3-204ENST00000460431 FPGT-TNNI3KV9GXZ4 949 aa20.28■□□□□ 0.84
SMARCD3-204ENST00000460431 MAST3O60307 1309 aa20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 AOX1Q06278 1338 aa20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 HMMRO75330 724 aa20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 RRP1P56182 461 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 RASGRF1Q13972 1273 aa20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 GORABQ5T7V8 394 aa20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 TEKT1Q969V4 418 aa20.27■□□□□ 0.84
SMARCD3-204ENST00000460431 CA12O43570 354 aa20.26■□□□□ 0.83
SMARCD3-204ENST00000460431 HSP90AB4PQ58FF6 505 aa20.26■□□□□ 0.83
SMARCD3-204ENST00000460431 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
SMARCD3-204ENST00000460431 HHIPL2Q6UWX4 724 aa20.26■□□□□ 0.83
SMARCD3-204ENST00000460431 ERC1Q8IUD2 1116 aa20.26■□□□□ 0.83
SMARCD3-204ENST00000460431 CCDC102AQ96A19 550 aa20.26■□□□□ 0.83
SMARCD3-204ENST00000460431 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
SMARCD3-204ENST00000460431 CLRN2A0PK11 232 aa20.25■□□□□ 0.83
SMARCD3-204ENST00000460431 ARID4AP29374 1257 aaPredicted RBP20.25■□□□□ 0.83
SMARCD3-204ENST00000460431 SPDYE2Q495Y8 402 aa20.25■□□□□ 0.83
SMARCD3-204ENST00000460431 ZDHHC15Q96MV8 337 aa20.25■□□□□ 0.83
SMARCD3-204ENST00000460431 DEFB129Q9H1M3 183 aa20.25■□□□□ 0.83
SMARCD3-204ENST00000460431 TDRD3Q9H7E2 651 aaKnown RBP20.25■□□□□ 0.83
SMARCD3-204ENST00000460431 ZNF70Q9UC06 446 aaPredicted RBP20.25■□□□□ 0.83
SMARCD3-204ENST00000460431 AKAP11Q9UKA4 1901 aa20.24■□□□□ 0.83
SMARCD3-204ENST00000460431 MYH2Q9UKX2 1941 aa20.24■□□□□ 0.83
SMARCD3-204ENST00000460431 LDHBP07195 334 aaKnown RBP20.24■□□□□ 0.83
SMARCD3-204ENST00000460431 PRDX5P30044 214 aa20.24■□□□□ 0.83
SMARCD3-204ENST00000460431 ZNF157P51786 506 aaPredicted RBP20.24■□□□□ 0.83
SMARCD3-204ENST00000460431 ZGPATQ8N5A5 531 aaKnown RBP20.24■□□□□ 0.83
SMARCD3-204ENST00000460431 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
SMARCD3-204ENST00000460431 UQCRFS1P1P0C7P4 283 aa20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 FKBP1BP68106 108 aa20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 KIF23Q02241 960 aaPredicted RBP20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 APOBEC3HQ6NTF7 200 aaKnown RBP20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 EAF2Q96CJ1 260 aaPredicted RBP20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 VEZTQ9HBM0 779 aa20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 PPP2R3BQ9Y5P8 575 aa20.23■□□□□ 0.83
SMARCD3-204ENST00000460431 PAPPA2Q9BXP8 1791 aa20.22■□□□□ 0.83
SMARCD3-204ENST00000460431 CCDC158Q5M9N0 1113 aa20.22■□□□□ 0.83
SMARCD3-204ENST00000460431 SPATA5Q8NB90 893 aa20.22■□□□□ 0.83
SMARCD3-204ENST00000460431 RHPN1Q8TCX5 695 aa20.22■□□□□ 0.83
SMARCD3-204ENST00000460431 SLC10A3P09131 477 aa20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 NF2P35240 595 aa20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 MCAMP43121 646 aa20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 SPTY2D1Q68D10 685 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 ABHD8Q96I13 439 aa20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 ZNF512BQ96KM6 892 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 CCDC8Q9H0W5 538 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 ABCF2Q9UG63 623 aa20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 DBNLQ9UJU6 430 aaKnown RBP20.21■□□□□ 0.83
SMARCD3-204ENST00000460431 RAB11FIP3O75154 756 aa20.2■□□□□ 0.82
SMARCD3-204ENST00000460431 TNFAIP1Q13829 316 aa20.2■□□□□ 0.82
SMARCD3-204ENST00000460431 RASA3Q14644 834 aa20.2■□□□□ 0.82
SMARCD3-204ENST00000460431 DIXDC1Q155Q3 683 aa20.2■□□□□ 0.82
SMARCD3-204ENST00000460431 TTC39AQ5SRH9 613 aa20.2■□□□□ 0.82
SMARCD3-204ENST00000460431 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
SMARCD3-204ENST00000460431 KIF1BPQ96EK5 621 aa20.2■□□□□ 0.82
SMARCD3-204ENST00000460431 MOB2Q70IA6 237 aa20.19■□□□□ 0.82
SMARCD3-204ENST00000460431 CSRNP1Q96S65 589 aa20.19■□□□□ 0.82
SMARCD3-204ENST00000460431 TLR7Q9NYK1 1049 aaKnown RBP20.19■□□□□ 0.82
SMARCD3-204ENST00000460431 DAGLAQ9Y4D2 1042 aa20.19■□□□□ 0.82
SMARCD3-204ENST00000460431 SUPT20HL1Q3ZLR7 823 aa20.18■□□□□ 0.82
SMARCD3-204ENST00000460431 FKBP1CQ5VVH2 108 aa20.18■□□□□ 0.82
SMARCD3-204ENST00000460431 ERICH6Q7L0X2 663 aa20.18■□□□□ 0.82
SMARCD3-204ENST00000460431 AACSQ86V21 672 aa20.18■□□□□ 0.82
SMARCD3-204ENST00000460431 RASAL3Q86YV0 1011 aa20.18■□□□□ 0.82
SMARCD3-204ENST00000460431 FAM163AQ96GL9 167 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms