RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 AACSQ86V21 672 aa26.29■■□□□ 1.8
ABCD4-202ENST00000460308 APOBEC3FQ8IUX4 373 aaKnown RBP26.29■■□□□ 1.8
ABCD4-202ENST00000460308 CLASRPQ8N2M8 674 aaKnown RBP26.29■■□□□ 1.8
ABCD4-202ENST00000460308 BCL11AQ9H165 835 aa26.29■■□□□ 1.8
ABCD4-202ENST00000460308 IL1RAPL2Q9NP60 686 aa26.29■■□□□ 1.8
ABCD4-202ENST00000460308 ABT1Q9ULW3 272 aaKnown RBP26.29■■□□□ 1.8
ABCD4-202ENST00000460308 PCDHAC2Q9Y5I4 1007 aa26.29■■□□□ 1.8
ABCD4-202ENST00000460308 PDS5AQ29RF7 1337 aaKnown RBP26.29■■□□□ 1.8
ABCD4-202ENST00000460308 SALL1Q9NSC2 1324 aa26.29■■□□□ 1.8
ABCD4-202ENST00000460308 COL1A1P02452 1464 aaPredicted RBP26.29■■□□□ 1.8
ABCD4-202ENST00000460308 ARID4AP29374 1257 aaPredicted RBP26.28■■□□□ 1.8
ABCD4-202ENST00000460308 CST9Q5W186 159 aa26.28■■□□□ 1.8
ABCD4-202ENST00000460308 DLK2Q6UY11 383 aa26.28■■□□□ 1.8
ABCD4-202ENST00000460308 SPATA5Q8NB90 893 aa26.28■■□□□ 1.8
ABCD4-202ENST00000460308 MRIQ9BWK5 157 aa26.28■■□□□ 1.8
ABCD4-202ENST00000460308 ABCF2Q9UG63 623 aa26.28■■□□□ 1.8
ABCD4-202ENST00000460308 SCAF8Q9UPN6 1271 aaKnown RBP26.28■■□□□ 1.8
ABCD4-202ENST00000460308 SPTY2D1Q68D10 685 aaPredicted RBP26.27■■□□□ 1.8
ABCD4-202ENST00000460308 HMG20BQ9P0W2 317 aa26.27■■□□□ 1.8
ABCD4-202ENST00000460308 CLRN2A0PK11 232 aa26.26■■□□□ 1.79
ABCD4-202ENST00000460308 CDCA5Q96FF9 252 aa26.26■■□□□ 1.79
ABCD4-202ENST00000460308 VEZTQ9HBM0 779 aa26.26■■□□□ 1.79
ABCD4-202ENST00000460308 DBNLQ9UJU6 430 aaKnown RBP26.26■■□□□ 1.79
ABCD4-202ENST00000460308 PRDX5P30044 214 aa26.25■■□□□ 1.79
ABCD4-202ENST00000460308 HHIPL2Q6UWX4 724 aa26.25■■□□□ 1.79
ABCD4-202ENST00000460308 DNAJC5GQ8N7S2 189 aa26.25■■□□□ 1.79
ABCD4-202ENST00000460308 PCDHB15Q9Y5E8 787 aa26.25■■□□□ 1.79
ABCD4-202ENST00000460308 IFIT2P09913 472 aaKnown RBP26.24■■□□□ 1.79
ABCD4-202ENST00000460308 MCAMP43121 646 aa26.24■■□□□ 1.79
ABCD4-202ENST00000460308 ERICH6Q7L0X2 663 aa26.24■■□□□ 1.79
ABCD4-202ENST00000460308 ZDHHC15Q96MV8 337 aa26.24■■□□□ 1.79
ABCD4-202ENST00000460308 TDRD3Q9H7E2 651 aaKnown RBP26.24■■□□□ 1.79
ABCD4-202ENST00000460308 TLR7Q9NYK1 1049 aaKnown RBP26.24■■□□□ 1.79
ABCD4-202ENST00000460308 AAMPQ13685 434 aa26.23■■□□□ 1.79
ABCD4-202ENST00000460308 PI16Q6UXB8 463 aa26.23■■□□□ 1.79
ABCD4-202ENST00000460308 DZIP1Q86YF9 867 aaKnown RBP26.23■■□□□ 1.79
ABCD4-202ENST00000460308 C2orf69Q8N8R5 385 aa26.23■■□□□ 1.79
ABCD4-202ENST00000460308 KLRG1Q96E93 195 aa26.23■■□□□ 1.79
ABCD4-202ENST00000460308 ZNF70Q9UC06 446 aaPredicted RBP26.23■■□□□ 1.79
ABCD4-202ENST00000460308 MKRN1Q9UHC7 482 aaKnown RBP26.23■■□□□ 1.79
ABCD4-202ENST00000460308 ECM29Q5VYK3 1845 aa26.23■■□□□ 1.79
ABCD4-202ENST00000460308 DEFB115Q30KQ5 88 aa26.22■■□□□ 1.79
ABCD4-202ENST00000460308 SLF2Q8IX21 1173 aa26.22■■□□□ 1.79
ABCD4-202ENST00000460308 ZNF512BQ96KM6 892 aaPredicted RBP26.22■■□□□ 1.79
ABCD4-202ENST00000460308 LRRCC1Q9C099 1032 aa26.22■■□□□ 1.79
ABCD4-202ENST00000460308 DCTPP1Q9H773 170 aa26.22■■□□□ 1.79
ABCD4-202ENST00000460308 SNRKQ9NRH2 765 aa26.22■■□□□ 1.79
ABCD4-202ENST00000460308 NF2P35240 595 aa26.21■■□□□ 1.79
ABCD4-202ENST00000460308 SPDYE2Q495Y8 402 aa26.21■■□□□ 1.79
ABCD4-202ENST00000460308 PRAMEF18Q5VWM3 479 aa26.21■■□□□ 1.79
ABCD4-202ENST00000460308 DEFB129Q9H1M3 183 aa26.21■■□□□ 1.79
ABCD4-202ENST00000460308 GBA2Q9HCG7 927 aaPredicted RBP26.21■■□□□ 1.79
ABCD4-202ENST00000460308 TMOD2Q9NZR1 351 aa26.21■■□□□ 1.79
ABCD4-202ENST00000460308 TLL2Q9Y6L7 1015 aa26.21■■□□□ 1.79
ABCD4-202ENST00000460308 TNFAIP1Q13829 316 aa26.2■■□□□ 1.78
ABCD4-202ENST00000460308 DIXDC1Q155Q3 683 aa26.2■■□□□ 1.78
ABCD4-202ENST00000460308 TBC1D9Q6ZT07 1266 aa26.2■■□□□ 1.78
ABCD4-202ENST00000460308 PAXIP1Q6ZW49 1069 aaPredicted RBP26.2■■□□□ 1.78
ABCD4-202ENST00000460308 RAI14Q9P0K7 980 aa26.2■■□□□ 1.78
ABCD4-202ENST00000460308 LRP2BPQ9P2M1 347 aa26.2■■□□□ 1.78
ABCD4-202ENST00000460308 AOX1Q06278 1338 aa26.19■■□□□ 1.78
ABCD4-202ENST00000460308 APOBEC3HQ6NTF7 200 aaKnown RBP26.19■■□□□ 1.78
ABCD4-202ENST00000460308 PPP2R3BQ9Y5P8 575 aa26.19■■□□□ 1.78
ABCD4-202ENST00000460308 RASSF10A6NK89 507 aa26.18■■□□□ 1.78
ABCD4-202ENST00000460308 TNNI2P48788 182 aa26.18■■□□□ 1.78
ABCD4-202ENST00000460308 SAPCD2Q86UD0 394 aa26.18■■□□□ 1.78
ABCD4-202ENST00000460308 DAGLAQ9Y4D2 1042 aa26.18■■□□□ 1.78
ABCD4-202ENST00000460308 CNTNAP1P78357 1384 aa26.18■■□□□ 1.78
ABCD4-202ENST00000460308 TCP10L2B9ZVM9 353 aa26.17■■□□□ 1.78
ABCD4-202ENST00000460308 SMARCA5O60264 1052 aaPredicted RBP26.17■■□□□ 1.78
ABCD4-202ENST00000460308 LDHCP07864 332 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 ZAP70P43403 619 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 HUNKP57058 714 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 GSTO1P78417 241 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 MECOMQ03112 1051 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 TTLL12Q14166 644 aaPredicted RBP26.16■■□□□ 1.78
ABCD4-202ENST00000460308 RASA3Q14644 834 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 EXOC6Q8TAG9 804 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 MYH2Q9UKX2 1941 aa26.16■■□□□ 1.78
ABCD4-202ENST00000460308 FKBP1BP68106 108 aa26.15■■□□□ 1.78
ABCD4-202ENST00000460308 SUPT20HL1Q3ZLR7 823 aa26.15■■□□□ 1.78
ABCD4-202ENST00000460308 AKAP11Q9UKA4 1901 aa26.15■■□□□ 1.78
ABCD4-202ENST00000460308 CYP2E1P05181 493 aaPredicted RBP26.14■■□□□ 1.78
ABCD4-202ENST00000460308 ECE1P42892 770 aa26.14■■□□□ 1.78
ABCD4-202ENST00000460308 HHIPL1Q96JK4 782 aa26.14■■□□□ 1.78
ABCD4-202ENST00000460308 USP40Q9NVE5 1235 aa26.14■■□□□ 1.78
ABCD4-202ENST00000460308 ZBTB47Q9UFB7 747 aaPredicted RBP26.14■■□□□ 1.78
ABCD4-202ENST00000460308 VEGFBP49765 207 aa26.13■■□□□ 1.77
ABCD4-202ENST00000460308 CACNB3P54284 484 aa26.13■■□□□ 1.77
ABCD4-202ENST00000460308 GRM1Q13255 1194 aa26.13■■□□□ 1.77
ABCD4-202ENST00000460308 CDC42EP5Q6NZY7 148 aa26.13■■□□□ 1.77
ABCD4-202ENST00000460308 FAM163AQ96GL9 167 aaPredicted RBP26.13■■□□□ 1.77
ABCD4-202ENST00000460308 CEP350Q5VT06 3117 aa26.13■■□□□ 1.77
ABCD4-202ENST00000460308 FKBP1CQ5VVH2 108 aa26.12■■□□□ 1.77
ABCD4-202ENST00000460308 NSUN4Q96CB9 384 aaKnown RBP26.12■■□□□ 1.77
ABCD4-202ENST00000460308 GAKO14976 1311 aa26.12■■□□□ 1.77
ABCD4-202ENST00000460308 IGSF3O75054 1194 aa26.11■■□□□ 1.77
ABCD4-202ENST00000460308 HDAC1Q13547 482 aaPredicted RBP26.11■■□□□ 1.77
ABCD4-202ENST00000460308 PRKG1Q13976 671 aa26.11■■□□□ 1.77
ABCD4-202ENST00000460308 ARMC9Q7Z3E5 817 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms