RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 SAGE1Q9NXZ1 904 aa18.47■□□□□ 0.55
ATG4B-213ENST00000460211 PITPNM2Q9BZ72 1349 aa18.47■□□□□ 0.55
ATG4B-213ENST00000460211 WNT10BO00744 389 aa18.46■□□□□ 0.55
ATG4B-213ENST00000460211 MYO1BO43795 1136 aa18.46■□□□□ 0.55
ATG4B-213ENST00000460211 SLC10A3P09131 477 aa18.46■□□□□ 0.55
ATG4B-213ENST00000460211 TFCP2Q12800 502 aa18.46■□□□□ 0.55
ATG4B-213ENST00000460211 SURF6O75683 361 aaKnown RBP18.45■□□□□ 0.54
ATG4B-213ENST00000460211 RBM5P52756 815 aaKnown RBP eCLIP18.45■□□□□ 0.54
ATG4B-213ENST00000460211 NBPF9Q3BBW0 867 aa18.45■□□□□ 0.54
ATG4B-213ENST00000460211 MTMR14Q8NCE2 650 aa18.45■□□□□ 0.54
ATG4B-213ENST00000460211 WDR66Q8TBY9 1149 aa18.45■□□□□ 0.54
ATG4B-213ENST00000460211 CSRNP1Q96S65 589 aa18.45■□□□□ 0.54
ATG4B-213ENST00000460211 TTF2Q9UNY4 1162 aaKnown RBP18.45■□□□□ 0.54
ATG4B-213ENST00000460211 SCAF8Q9UPN6 1271 aaKnown RBP18.45■□□□□ 0.54
ATG4B-213ENST00000460211 A0A1B0GUL7 405 aa18.44■□□□□ 0.54
ATG4B-213ENST00000460211 SEMA3EO15041 775 aa18.44■□□□□ 0.54
ATG4B-213ENST00000460211 TIMM10P62072 90 aa18.44■□□□□ 0.54
ATG4B-213ENST00000460211 CFAP100Q494V2 611 aa18.44■□□□□ 0.54
ATG4B-213ENST00000460211 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
ATG4B-213ENST00000460211 NEUROD6Q96NK8 337 aa18.44■□□□□ 0.54
ATG4B-213ENST00000460211 SUGT1Q9Y2Z0 365 aa18.44■□□□□ 0.54
ATG4B-213ENST00000460211 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
ATG4B-213ENST00000460211 RASAL3Q86YV0 1011 aa18.43■□□□□ 0.54
ATG4B-213ENST00000460211 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
ATG4B-213ENST00000460211 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-213ENST00000460211 SERPINA10Q9UK55 444 aa18.43■□□□□ 0.54
ATG4B-213ENST00000460211 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
ATG4B-213ENST00000460211 HMMRO75330 724 aa18.42■□□□□ 0.54
ATG4B-213ENST00000460211 CCDC102BQ68D86 513 aa18.42■□□□□ 0.54
ATG4B-213ENST00000460211 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
ATG4B-213ENST00000460211 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
ATG4B-213ENST00000460211 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
ATG4B-213ENST00000460211 MAST3O60307 1309 aa18.42■□□□□ 0.54
ATG4B-213ENST00000460211 ADORA1P30542 326 aa18.41■□□□□ 0.54
ATG4B-213ENST00000460211 PHKA1P46020 1223 aa18.41■□□□□ 0.54
ATG4B-213ENST00000460211 HDLBPQ00341 1268 aaKnown RBP18.41■□□□□ 0.54
ATG4B-213ENST00000460211 HSP90AB4PQ58FF6 505 aa18.41■□□□□ 0.54
ATG4B-213ENST00000460211 MOB2Q70IA6 237 aa18.41■□□□□ 0.54
ATG4B-213ENST00000460211 ZBED3Q96IU2 234 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-213ENST00000460211 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
ATG4B-213ENST00000460211 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
ATG4B-213ENST00000460211 ZBTB22O15209 634 aa18.4■□□□□ 0.54
ATG4B-213ENST00000460211 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
ATG4B-213ENST00000460211 NF2P35240 595 aa18.4■□□□□ 0.54
ATG4B-213ENST00000460211 CTU1Q7Z7A3 348 aaKnown RBP18.4■□□□□ 0.54
ATG4B-213ENST00000460211 ERC1Q8IUD2 1116 aa18.4■□□□□ 0.54
ATG4B-213ENST00000460211 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
ATG4B-213ENST00000460211 MRIQ9BWK5 157 aa18.4■□□□□ 0.54
ATG4B-213ENST00000460211 PDE4DIPQ5VU43 2346 aa18.4■□□□□ 0.54
ATG4B-213ENST00000460211 CRKP46108 304 aa18.39■□□□□ 0.53
ATG4B-213ENST00000460211 PRAMEF18Q5VWM3 479 aa18.39■□□□□ 0.53
ATG4B-213ENST00000460211 TEKT1Q969V4 418 aa18.39■□□□□ 0.53
ATG4B-213ENST00000460211 PRMT6Q96LA8 375 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-213ENST00000460211 PAPPA2Q9BXP8 1791 aa18.39■□□□□ 0.53
ATG4B-213ENST00000460211 UBE2Q2LH0YL09 131 aa18.38■□□□□ 0.53
ATG4B-213ENST00000460211 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
ATG4B-213ENST00000460211 LDHBP07195 334 aaKnown RBP18.37■□□□□ 0.53
ATG4B-213ENST00000460211 FKBP1BP68106 108 aa18.37■□□□□ 0.53
ATG4B-213ENST00000460211 TNFAIP1Q13829 316 aa18.37■□□□□ 0.53
ATG4B-213ENST00000460211 TNNI3KQ59H18 835 aa18.37■□□□□ 0.53
ATG4B-213ENST00000460211 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
ATG4B-213ENST00000460211 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
ATG4B-213ENST00000460211 PPP2R3BQ9Y5P8 575 aa18.37■□□□□ 0.53
ATG4B-213ENST00000460211 FPGT-TNNI3KV9GXZ4 949 aa18.37■□□□□ 0.53
ATG4B-213ENST00000460211 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-213ENST00000460211 CLRN2A0PK11 232 aa18.36■□□□□ 0.53
ATG4B-213ENST00000460211 TBC1D8O95759 1140 aa18.36■□□□□ 0.53
ATG4B-213ENST00000460211 UQCRFS1P1P0C7P4 283 aa18.36■□□□□ 0.53
ATG4B-213ENST00000460211 TTLL12Q14166 644 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-213ENST00000460211 GRIK5Q16478 980 aa18.36■□□□□ 0.53
ATG4B-213ENST00000460211 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
ATG4B-213ENST00000460211 SPTY2D1Q68D10 685 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-213ENST00000460211 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
ATG4B-213ENST00000460211 SALL1Q9NSC2 1324 aa18.36■□□□□ 0.53
ATG4B-213ENST00000460211 PCDHAC2Q9Y5I4 1007 aa18.36■□□□□ 0.53
ATG4B-213ENST00000460211 MKRN3Q13064 507 aaKnown RBP18.35■□□□□ 0.53
ATG4B-213ENST00000460211 RASGRF1Q13972 1273 aa18.35■□□□□ 0.53
ATG4B-213ENST00000460211 HHIPL2Q6UWX4 724 aa18.35■□□□□ 0.53
ATG4B-213ENST00000460211 REM2Q8IYK8 340 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-213ENST00000460211 ZDHHC15Q96MV8 337 aa18.35■□□□□ 0.53
ATG4B-213ENST00000460211 TDRD3Q9H7E2 651 aaKnown RBP18.35■□□□□ 0.53
ATG4B-213ENST00000460211 TMOD2Q9NZR1 351 aa18.35■□□□□ 0.53
ATG4B-213ENST00000460211 ZNF70Q9UC06 446 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-213ENST00000460211 HPS5Q9UPZ3 1129 aa18.35■□□□□ 0.53
ATG4B-213ENST00000460211 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
ATG4B-213ENST00000460211 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-213ENST00000460211 TNNI2P48788 182 aa18.34■□□□□ 0.53
ATG4B-213ENST00000460211 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
ATG4B-213ENST00000460211 SUPT20HL1Q3ZLR7 823 aa18.34■□□□□ 0.53
ATG4B-213ENST00000460211 SPDYE2Q495Y8 402 aa18.34■□□□□ 0.53
ATG4B-213ENST00000460211 TTC39AQ5SRH9 613 aa18.34■□□□□ 0.53
ATG4B-213ENST00000460211 SLF2Q8IX21 1173 aa18.34■□□□□ 0.53
ATG4B-213ENST00000460211 ZNF296Q8WUU4 475 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-213ENST00000460211 ABCF2Q9UG63 623 aa18.34■□□□□ 0.53
ATG4B-213ENST00000460211 ARID4AP29374 1257 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-213ENST00000460211 SPATA5Q8NB90 893 aa18.33■□□□□ 0.52
ATG4B-213ENST00000460211 PCDH10Q9P2E7 1040 aa18.33■□□□□ 0.52
ATG4B-213ENST00000460211 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-213ENST00000460211 RAB11FIP3O75154 756 aa18.32■□□□□ 0.52
ATG4B-213ENST00000460211 PRDX5P30044 214 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms