RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 CDC25BP30305 580 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 DTHD1Q6ZMT9 781 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 VN1R5Q7Z5H4 357 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 MAP4K3Q8IVH8 894 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 C3orf58Q8NDZ4 430 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 MRPL18Q9H0U6 180 aaKnown RBP5.62□□□□□ -1.51
VPS8-215ENST00000460158 AKTIPQ9H8T0 292 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 SOX13Q9UN79 622 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 GSTT1P30711 240 aa5.61□□□□□ -1.51
VPS8-215ENST00000460158 LDLRAD1Q5T700 205 aa5.61□□□□□ -1.51
VPS8-215ENST00000460158 TXNDC11Q6PKC3 985 aa5.61□□□□□ -1.51
VPS8-215ENST00000460158 BACH2Q9BYV9 841 aa5.61□□□□□ -1.51
VPS8-215ENST00000460158 BCL11AQ9H165 835 aa5.61□□□□□ -1.51
VPS8-215ENST00000460158 ZNF576Q9H609 170 aa5.61□□□□□ -1.51
VPS8-215ENST00000460158 AKAP2Q9Y2D5 859 aa5.61□□□□□ -1.51
VPS8-215ENST00000460158 FAM177BA6PVY3 158 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 LINC01387J3KSC0 135 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 RECKO95980 971 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 VAMP1P23763 118 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 PTPN12Q05209 780 aaKnown RBP5.6□□□□□ -1.51
VPS8-215ENST00000460158 TSNAXIP1Q2TAA8 658 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 MEI1Q5TIA1 1274 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 CACTIN-AS1Q8N1I8 211 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 CLEC4MQ9H2X3 399 aaPredicted RBP5.6□□□□□ -1.51
VPS8-215ENST00000460158 PPME1Q9Y570 386 aa5.6□□□□□ -1.51
VPS8-215ENST00000460158 F8W735 103 aaPredicted RBP5.59□□□□□ -1.51
VPS8-215ENST00000460158 SOX1O00570 391 aaPredicted RBP5.59□□□□□ -1.51
VPS8-215ENST00000460158 FBXO24O75426 580 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 XRCC5P13010 732 aaKnown RBP5.59□□□□□ -1.51
VPS8-215ENST00000460158 FSTP19883 344 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 ITGAEP38570 1179 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 PCDH1Q08174 1060 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 FAAP100Q0VG06 881 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 ZNF423Q2M1K9 1284 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 HGSNATQ68CP4 663 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 MCTP1Q6DN14 999 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 Q6ZS46 218 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 NPM2Q86SE8 214 aaKnown RBP5.59□□□□□ -1.51
VPS8-215ENST00000460158 CRELD1Q96HD1 420 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 PCMTD2Q9NV79 361 aa5.59□□□□□ -1.51
VPS8-215ENST00000460158 USP31Q70CQ4 1352 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 E9PSI1 815 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 H3BRJ5 948 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 ESRRAP11474 423 aaPredicted RBP5.58□□□□□ -1.52
VPS8-215ENST00000460158 ZNF157P51786 506 aaPredicted RBP5.58□□□□□ -1.52
VPS8-215ENST00000460158 CABP4P57796 275 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 IKBKEQ14164 716 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 TMEM87AQ8NBN3 555 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 GOLGA2P5Q9HBQ8 144 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 SEC31BQ9NQW1 1179 aa5.58□□□□□ -1.52
VPS8-215ENST00000460158 TTF2Q9UNY4 1162 aaKnown RBP5.58□□□□□ -1.52
VPS8-215ENST00000460158 FSCN2O14926 492 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 GSC2O15499 205 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 ALX3O95076 343 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 SETDB1Q15047 1291 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 TAF1CQ15572 869 aaPredicted RBP5.57□□□□□ -1.52
VPS8-215ENST00000460158 RPS26P11Q5JNZ5 115 aaPredicted RBP5.57□□□□□ -1.52
VPS8-215ENST00000460158 TPTE2Q6XPS3 522 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 CARD10Q9BWT7 1032 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 ZFYVE1Q9HBF4 777 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 PPM1HQ9ULR3 514 aa5.57□□□□□ -1.52
VPS8-215ENST00000460158 COL17A1Q9UMD9 1497 aaPredicted RBP5.57□□□□□ -1.52
VPS8-215ENST00000460158 TM4SF5O14894 197 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 B3GALT4O96024 378 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 CD97P48960 835 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 FAM117BQ6P1L5 589 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 GALNT11Q8NCW6 608 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 ANKRD24Q8TF21 1146 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 KLHDC7BQ96G42 594 aa5.56□□□□□ -1.52
VPS8-215ENST00000460158 GPN3Q9UHW5 284 aaPredicted RBP5.56□□□□□ -1.52
VPS8-215ENST00000460158 BTBD11A6QL63 1104 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 ENC1O14682 589 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 CELA3AP09093 270 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 ST13P50502 369 aaKnown RBP5.55□□□□□ -1.52
VPS8-215ENST00000460158 PIP4K2BP78356 416 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 C19orf57Q0VDD7 668 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 CCDC85BQ15834 202 aaPredicted RBP5.55□□□□□ -1.52
VPS8-215ENST00000460158 NECAB3Q96P71 396 aaPredicted RBP5.55□□□□□ -1.52
VPS8-215ENST00000460158 CEP44Q9C0F1 390 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 RAXQ9Y2V3 346 aa5.55□□□□□ -1.52
VPS8-215ENST00000460158 DDX3YO15523 660 aaKnown RBP5.54□□□□□ -1.52
VPS8-215ENST00000460158 PAX4O43316 350 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 PAGE1O75459 146 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 SSTR4P31391 388 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 ARL4DP49703 201 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 GSTM4Q03013 218 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.54□□□□□ -1.52
VPS8-215ENST00000460158 WNT8BQ93098 351 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 TRIM56Q9BRZ2 755 aaKnown RBP5.54□□□□□ -1.52
VPS8-215ENST00000460158 SOX17Q9H6I2 414 aaPredicted RBP5.54□□□□□ -1.52
VPS8-215ENST00000460158 OSGEPQ9NPF4 335 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 KCNK4Q9NYG8 393 aa5.54□□□□□ -1.52
VPS8-215ENST00000460158 KIAA1324LA8MWY0 1029 aaPredicted RBP5.53□□□□□ -1.52
VPS8-215ENST00000460158 SCAMP3O14828 347 aaKnown RBP5.53□□□□□ -1.52
VPS8-215ENST00000460158 ADAM11O75078 769 aa5.53□□□□□ -1.52
VPS8-215ENST00000460158 IGLV1-40P01703 118 aa5.53□□□□□ -1.52
VPS8-215ENST00000460158 GLB1P16278 677 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms