RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CIAO1O76071 339 aa18.6■□□□□ 0.57
CMTM3-203ENST00000460097 KCNJ4P48050 445 aa18.6■□□□□ 0.57
CMTM3-203ENST00000460097 METTL24Q5JXM2 366 aa18.6■□□□□ 0.57
CMTM3-203ENST00000460097 JDP2Q8WYK2 163 aa18.6■□□□□ 0.57
CMTM3-203ENST00000460097 ANO2Q9NQ90 1003 aa18.6■□□□□ 0.57
CMTM3-203ENST00000460097 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
CMTM3-203ENST00000460097 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-203ENST00000460097 RIMBP2O15034 1052 aa18.6■□□□□ 0.57
CMTM3-203ENST00000460097 CCDC88AQ3V6T2 1871 aa18.59■□□□□ 0.57
CMTM3-203ENST00000460097 IL15P40933 162 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-203ENST00000460097 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
CMTM3-203ENST00000460097 TTC14Q96N46 770 aa18.59■□□□□ 0.57
CMTM3-203ENST00000460097 GPR101Q96P66 508 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-203ENST00000460097 DUOX1Q9NRD9 1551 aa18.58■□□□□ 0.57
CMTM3-203ENST00000460097 YY1P25490 414 aa18.58■□□□□ 0.57
CMTM3-203ENST00000460097 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.57
CMTM3-203ENST00000460097 FOXD4L5Q5VV16 416 aaPredicted RBP18.58■□□□□ 0.57
CMTM3-203ENST00000460097 FOXD4L4Q8WXT5 416 aaPredicted RBP18.58■□□□□ 0.57
CMTM3-203ENST00000460097 RAD50Q92878 1312 aa18.58■□□□□ 0.56
CMTM3-203ENST00000460097 SNAP23O00161 211 aa18.58■□□□□ 0.56
CMTM3-203ENST00000460097 PDE8BO95263 885 aa18.58■□□□□ 0.56
CMTM3-203ENST00000460097 TAF3Q5VWG9 929 aa18.58■□□□□ 0.56
CMTM3-203ENST00000460097 NIM1KQ8IY84 436 aa18.58■□□□□ 0.56
CMTM3-203ENST00000460097 TTC12Q9H892 705 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-203ENST00000460097 CEP126Q9P2H0 1117 aa18.58■□□□□ 0.56
CMTM3-203ENST00000460097 ZC3H4Q9UPT8 1303 aaKnown RBP18.57■□□□□ 0.56
CMTM3-203ENST00000460097 LTBP1Q14766 1721 aa18.57■□□□□ 0.56
CMTM3-203ENST00000460097 G3V3G9 751 aa18.57■□□□□ 0.56
CMTM3-203ENST00000460097 STX6O43752 255 aa18.57■□□□□ 0.56
CMTM3-203ENST00000460097 F13A1P00488 732 aa18.57■□□□□ 0.56
CMTM3-203ENST00000460097 UBE4AQ14139 1066 aa18.57■□□□□ 0.56
CMTM3-203ENST00000460097 DCAF8Q5TAQ9 597 aa18.57■□□□□ 0.56
CMTM3-203ENST00000460097 PDCL2Q8N4E4 241 aa18.57■□□□□ 0.56
CMTM3-203ENST00000460097 RAB11FIP3O75154 756 aa18.56■□□□□ 0.56
CMTM3-203ENST00000460097 SURF6O75683 361 aaKnown RBP18.56■□□□□ 0.56
CMTM3-203ENST00000460097 PPP4R3BQ5MIZ7 849 aa18.56■□□□□ 0.56
CMTM3-203ENST00000460097 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
CMTM3-203ENST00000460097 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
CMTM3-203ENST00000460097 CCDC171Q6TFL3 1326 aa18.56■□□□□ 0.56
CMTM3-203ENST00000460097 FZD9O00144 591 aa18.55■□□□□ 0.56
CMTM3-203ENST00000460097 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
CMTM3-203ENST00000460097 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
CMTM3-203ENST00000460097 APBB1O00213 710 aa18.55■□□□□ 0.56
CMTM3-203ENST00000460097 DOK7Q18PE1 504 aa18.55■□□□□ 0.56
CMTM3-203ENST00000460097 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
CMTM3-203ENST00000460097 EIF6P56537 245 aaKnown RBP18.54■□□□□ 0.56
CMTM3-203ENST00000460097 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
CMTM3-203ENST00000460097 C15orf52Q6ZUT6 534 aaKnown RBP18.54■□□□□ 0.56
CMTM3-203ENST00000460097 TXNRD3Q86VQ6 643 aa18.54■□□□□ 0.56
CMTM3-203ENST00000460097 ZSCAN31Q96LW9 406 aaPredicted RBP18.54■□□□□ 0.56
CMTM3-203ENST00000460097 DBNDD1Q9H9R9 158 aa18.54■□□□□ 0.56
CMTM3-203ENST00000460097 SGSM2O43147 1006 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 CCDC192P0DO97 292 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 SYT1P21579 422 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 KLRK1P26718 216 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 OS9Q13438 667 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-203ENST00000460097 PUM3Q15397 648 aaKnown RBP18.53■□□□□ 0.56
CMTM3-203ENST00000460097 ZNF830Q96NB3 372 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-203ENST00000460097 GDPD2Q9HCC8 539 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 SH2B1Q9NRF2 756 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-203ENST00000460097 CNPY2Q9Y2B0 182 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 TFCP2Q12800 502 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-203ENST00000460097 TM6SF1Q9BZW5 370 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 KCNF1Q9H3M0 494 aa18.53■□□□□ 0.56
CMTM3-203ENST00000460097 COL4A5P29400 1685 aa18.52■□□□□ 0.56
CMTM3-203ENST00000460097 ELP1O95163 1332 aa18.52■□□□□ 0.56
CMTM3-203ENST00000460097 TRIM6-TRIM34B2RNG4 842 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 ECE2O60344 883 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 FGFR2P21802 821 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 ATP2B3Q16720 1220 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 HSP90AB4PQ58FF6 505 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 LPIN2Q92539 896 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 KCNB2Q92953 911 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 COA1Q9GZY4 146 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 OGFRQ9NZT2 677 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.55
CMTM3-203ENST00000460097 GLTPD2A6NH11 291 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
CMTM3-203ENST00000460097 SASH1O94885 1247 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 IFIT1P09914 478 aaKnown RBP18.51■□□□□ 0.55
CMTM3-203ENST00000460097 PODNQ7Z5L7 613 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 FAM200AQ8TCP9 573 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 UPF3BQ9BZI7 483 aaKnown RBP18.51■□□□□ 0.55
CMTM3-203ENST00000460097 SMC3Q9UQE7 1217 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 AKAP2Q9Y2D5 859 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 IRS2Q9Y4H2 1338 aa18.51■□□□□ 0.55
CMTM3-203ENST00000460097 YDJCA8MPS7 323 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 SLC5A1P13866 664 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 RILPL2Q969X0 211 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 LSG1Q9H089 658 aaKnown RBP18.5■□□□□ 0.55
CMTM3-203ENST00000460097 A0A1B0GUL6 1792 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 ZNF541Q9H0D2 1346 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 GABPB1Q06547 395 aaPredicted RBP18.5■□□□□ 0.55
CMTM3-203ENST00000460097 CXCL9Q07325 125 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 CAVIN4Q5BKX8 364 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 ZNF804AQ7Z570 1209 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
CMTM3-203ENST00000460097 SMTNL1A8MU46 457 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms