RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
SYN3-205ENST00000459990 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
SYN3-205ENST00000459990 MROH5Q6ZUA9 1318 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 PPP1R12BO60237 982 aaPredicted RBP12.38□□□□□ -0.43
SYN3-205ENST00000459990 CACNB3P54284 484 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
SYN3-205ENST00000459990 OTOP1Q7RTM1 612 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 FBXO33Q7Z6M2 555 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 DZIP1LQ8IYY4 767 aaKnown RBP12.38□□□□□ -0.43
SYN3-205ENST00000459990 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 ELP3Q9H9T3 547 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
SYN3-205ENST00000459990 TESPA1A2RU30 521 aaPredicted RBP12.37□□□□□ -0.43
SYN3-205ENST00000459990 TCP10L2B9ZVM9 353 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 RFX5P48382 616 aaPredicted RBP12.37□□□□□ -0.43
SYN3-205ENST00000459990 CHAF1AQ13111 956 aaPredicted RBP12.37□□□□□ -0.43
SYN3-205ENST00000459990 CRHR2Q13324 411 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 VGLL4Q14135 290 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 ANKRD13AQ8IZ07 590 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.37□□□□□ -0.43
SYN3-205ENST00000459990 OPTNQ96CV9 577 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 PTPRCP08575 1304 aa12.37□□□□□ -0.43
SYN3-205ENST00000459990 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 PDE8BO95263 885 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 ALDH1A1P00352 501 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 FGFR2P21802 821 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 IREB2P48200 963 aaKnown RBP12.36□□□□□ -0.43
SYN3-205ENST00000459990 BCAMP50895 628 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 METTL24Q5JXM2 366 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 CD99L2Q8TCZ2 262 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 TRIM17Q9Y577 477 aa12.36□□□□□ -0.43
SYN3-205ENST00000459990 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
SYN3-205ENST00000459990 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
SYN3-205ENST00000459990 CDCA7LQ96GN5 454 aa12.35□□□□□ -0.43
SYN3-205ENST00000459990 PTPRFP10586 1907 aa12.35□□□□□ -0.43
SYN3-205ENST00000459990 RPAP1Q9BWH6 1393 aaPredicted RBP12.34□□□□□ -0.43
SYN3-205ENST00000459990 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 INHBEP58166 350 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 TNFAIP1Q13829 316 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
SYN3-205ENST00000459990 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
SYN3-205ENST00000459990 SNCAIPQ9Y6H5 919 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 AK9Q5TCS8 1911 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 KIAA0100Q14667 2235 aaKnown RBP12.34□□□□□ -0.43
SYN3-205ENST00000459990 KIF16BQ96L93 1317 aa12.34□□□□□ -0.43
SYN3-205ENST00000459990 E9PSI1 815 aa12.33□□□□□ -0.44
SYN3-205ENST00000459990 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
SYN3-205ENST00000459990 ATG9AQ7Z3C6 839 aa12.33□□□□□ -0.44
SYN3-205ENST00000459990 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
SYN3-205ENST00000459990 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
SYN3-205ENST00000459990 ZDHHC15Q96MV8 337 aa12.33□□□□□ -0.44
SYN3-205ENST00000459990 MGAMO43451 1857 aa12.32□□□□□ -0.44
SYN3-205ENST00000459990 SPDYE5A6NIY4 337 aa12.32□□□□□ -0.44
SYN3-205ENST00000459990 HDLBPQ00341 1268 aaKnown RBP12.32□□□□□ -0.44
SYN3-205ENST00000459990 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
SYN3-205ENST00000459990 CAVIN4Q5BKX8 364 aa12.32□□□□□ -0.44
SYN3-205ENST00000459990 VPS37DQ86XT2 251 aa12.32□□□□□ -0.44
SYN3-205ENST00000459990 TEKT1Q969V4 418 aa12.32□□□□□ -0.44
SYN3-205ENST00000459990 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
SYN3-205ENST00000459990 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
SYN3-205ENST00000459990 CCL15-CCL14A0A0B4J2E2 113 aa12.31□□□□□ -0.44
SYN3-205ENST00000459990 EYA2O00167 538 aa12.31□□□□□ -0.44
SYN3-205ENST00000459990 TNNI2P48788 182 aa12.31□□□□□ -0.44
SYN3-205ENST00000459990 CCL15Q16663 113 aa12.31□□□□□ -0.44
SYN3-205ENST00000459990 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
SYN3-205ENST00000459990 ZKSCAN4Q969J2 545 aaPredicted RBP12.31□□□□□ -0.44
SYN3-205ENST00000459990 RFX7Q2KHR2 1363 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 FRAT2O75474 233 aaPredicted RBP12.3□□□□□ -0.44
SYN3-205ENST00000459990 PRDX5P30044 214 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 SP3Q02447 781 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 DIXDC1Q155Q3 683 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 FAM83AQ86UY5 434 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
SYN3-205ENST00000459990 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 WRNIP1Q96S55 665 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 ARHGAP39Q9C0H5 1083 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 SIL1Q9H173 461 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 DAGLAQ9Y4D2 1042 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 ATAD5Q96QE3 1844 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
SYN3-205ENST00000459990 IRF6O14896 467 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 IFIT1P09914 478 aaKnown RBP12.29□□□□□ -0.44
SYN3-205ENST00000459990 INPP5BP32019 993 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 NFIAQ12857 509 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 TAF1CQ15572 869 aaPredicted RBP12.29□□□□□ -0.44
SYN3-205ENST00000459990 ALDH1L2Q3SY69 923 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
SYN3-205ENST00000459990 CSADQ9Y600 493 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 PTCH2Q9Y6C5 1203 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 MAST3O60307 1309 aa12.29□□□□□ -0.44
SYN3-205ENST00000459990 SIPA1L1O43166 1804 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms