RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 ERO1AQ96HE7 468 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 ELP3Q9H9T3 547 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 PTPN22Q9Y2R2 807 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 MROH5Q6ZUA9 1318 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
GPNMB-204ENST00000459927 SP3Q02447 781 aa15.55■□□□□ 0.08
GPNMB-204ENST00000459927 RABL6Q3YEC7 729 aaPredicted RBP15.55■□□□□ 0.08
GPNMB-204ENST00000459927 LRRC24Q50LG9 513 aa15.55■□□□□ 0.08
GPNMB-204ENST00000459927 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
GPNMB-204ENST00000459927 OPTNQ96CV9 577 aa15.55■□□□□ 0.08
GPNMB-204ENST00000459927 TMEM39BQ9GZU3 492 aa15.55■□□□□ 0.08
GPNMB-204ENST00000459927 BICC1Q9H694 974 aaKnown RBP15.55■□□□□ 0.08
GPNMB-204ENST00000459927 ECM29Q5VYK3 1845 aa15.54■□□□□ 0.08
GPNMB-204ENST00000459927 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
GPNMB-204ENST00000459927 PDE8BO95263 885 aa15.54■□□□□ 0.08
GPNMB-204ENST00000459927 TNNI2P48788 182 aa15.54■□□□□ 0.08
GPNMB-204ENST00000459927 CAVIN4Q5BKX8 364 aa15.54■□□□□ 0.08
GPNMB-204ENST00000459927 VPS37DQ86XT2 251 aa15.54■□□□□ 0.08
GPNMB-204ENST00000459927 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
GPNMB-204ENST00000459927 CD99L2Q8TCZ2 262 aa15.54■□□□□ 0.08
GPNMB-204ENST00000459927 EFCC1Q9HA90 598 aa15.54■□□□□ 0.08
GPNMB-204ENST00000459927 IQSEC3Q9UPP2 1182 aaPredicted RBP15.54■□□□□ 0.08
GPNMB-204ENST00000459927 POTEFA5A3E0 1075 aa15.53■□□□□ 0.08
GPNMB-204ENST00000459927 BCAMP50895 628 aa15.53■□□□□ 0.08
GPNMB-204ENST00000459927 CAP1Q01518 475 aa15.53■□□□□ 0.08
GPNMB-204ENST00000459927 ANKRD44Q8N8A2 993 aa15.53■□□□□ 0.08
GPNMB-204ENST00000459927 TBC1D22AQ8WUA7 517 aa15.53■□□□□ 0.08
GPNMB-204ENST00000459927 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
GPNMB-204ENST00000459927 A0A1B0GUL6 1792 aa15.52■□□□□ 0.08
GPNMB-204ENST00000459927 FRAT2O75474 233 aaPredicted RBP15.52■□□□□ 0.08
GPNMB-204ENST00000459927 GTF2A2P52657 109 aa15.52■□□□□ 0.08
GPNMB-204ENST00000459927 CHAF1AQ13111 956 aaPredicted RBP15.52■□□□□ 0.08
GPNMB-204ENST00000459927 METTL24Q5JXM2 366 aa15.52■□□□□ 0.08
GPNMB-204ENST00000459927 VGLL2Q8N8G2 317 aa15.52■□□□□ 0.08
GPNMB-204ENST00000459927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.52■□□□□ 0.08
GPNMB-204ENST00000459927 BRI3BPQ8WY22 251 aa15.52■□□□□ 0.08
GPNMB-204ENST00000459927 USP44Q9H0E7 712 aa15.52■□□□□ 0.08
GPNMB-204ENST00000459927 VGLL4Q14135 290 aa15.51■□□□□ 0.07
GPNMB-204ENST00000459927 ZDHHC15Q96MV8 337 aa15.51■□□□□ 0.07
GPNMB-204ENST00000459927 ZFYVE28Q9HCC9 887 aa15.51■□□□□ 0.07
GPNMB-204ENST00000459927 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 CCL15-CCL14A0A0B4J2E2 113 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 FGFR2P21802 821 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 CCL15Q16663 113 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 APOBEC3HQ6NTF7 200 aaKnown RBP15.5■□□□□ 0.07
GPNMB-204ENST00000459927 KLHDC4Q8TBB5 520 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 TEKT1Q969V4 418 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 ARMC5Q96C12 935 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 CSADQ9Y600 493 aa15.5■□□□□ 0.07
GPNMB-204ENST00000459927 CACNB3P54284 484 aa15.49■□□□□ 0.07
GPNMB-204ENST00000459927 ARHGEF6Q15052 776 aa15.49■□□□□ 0.07
GPNMB-204ENST00000459927 FKBP1CQ5VVH2 108 aa15.49■□□□□ 0.07
GPNMB-204ENST00000459927 HHIPL2Q6UWX4 724 aa15.49■□□□□ 0.07
GPNMB-204ENST00000459927 FAM83AQ86UY5 434 aa15.49■□□□□ 0.07
GPNMB-204ENST00000459927 FAM43AQ8N2R8 423 aa15.49■□□□□ 0.07
GPNMB-204ENST00000459927 SUGT1Q9Y2Z0 365 aa15.49■□□□□ 0.07
GPNMB-204ENST00000459927 PTPRCP08575 1304 aa15.48■□□□□ 0.07
GPNMB-204ENST00000459927 EN2P19622 333 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-204ENST00000459927 TAF1CQ15572 869 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-204ENST00000459927 ERO1BQ86YB8 467 aa15.48■□□□□ 0.07
GPNMB-204ENST00000459927 SSH1Q8WYL5 1049 aa15.48■□□□□ 0.07
GPNMB-204ENST00000459927 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-204ENST00000459927 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
GPNMB-204ENST00000459927 KIAA0100Q14667 2235 aaKnown RBP15.48■□□□□ 0.07
GPNMB-204ENST00000459927 LAMB1P07942 1786 aa15.47■□□□□ 0.07
GPNMB-204ENST00000459927 SPDYE5A6NIY4 337 aa15.47■□□□□ 0.07
GPNMB-204ENST00000459927 IFIT1P09914 478 aaKnown RBP15.47■□□□□ 0.07
GPNMB-204ENST00000459927 CETPP11597 493 aa15.47■□□□□ 0.07
GPNMB-204ENST00000459927 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
GPNMB-204ENST00000459927 RFX5P48382 616 aaPredicted RBP15.47■□□□□ 0.07
GPNMB-204ENST00000459927 SNCAIPQ9Y6H5 919 aa15.47■□□□□ 0.07
GPNMB-204ENST00000459927 EYA2O00167 538 aa15.46■□□□□ 0.07
GPNMB-204ENST00000459927 IRF6O14896 467 aa15.46■□□□□ 0.07
GPNMB-204ENST00000459927 PUM3Q15397 648 aaKnown RBP15.46■□□□□ 0.07
GPNMB-204ENST00000459927 MIGA2Q7L4E1 593 aa15.46■□□□□ 0.07
GPNMB-204ENST00000459927 NBPF11Q86T75 865 aa15.46■□□□□ 0.07
GPNMB-204ENST00000459927 HOOK2Q96ED9 719 aa15.46■□□□□ 0.07
GPNMB-204ENST00000459927 TMEM106CQ9BVX2 250 aa15.46■□□□□ 0.07
GPNMB-204ENST00000459927 TMOD2Q9NZR1 351 aa15.46■□□□□ 0.07
GPNMB-204ENST00000459927 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 BTBD19C9JJ37 291 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 TLR2O60603 784 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 SLFN5Q08AF3 891 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 WDR66Q8TBY9 1149 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 LPIN2Q92539 896 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 GCC1Q96CN9 775 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 ZNF333Q96JL9 665 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 WRNIP1Q96S55 665 aa15.45■□□□□ 0.06
GPNMB-204ENST00000459927 ZCCHC17Q9NP64 241 aaKnown RBP15.45■□□□□ 0.06
GPNMB-204ENST00000459927 E9PSI1 815 aa15.44■□□□□ 0.06
GPNMB-204ENST00000459927 WDHD1O75717 1129 aaPredicted RBP15.44■□□□□ 0.06
GPNMB-204ENST00000459927 PPATQ06203 517 aa15.44■□□□□ 0.06
GPNMB-204ENST00000459927 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
GPNMB-204ENST00000459927 ATG9AQ7Z3C6 839 aa15.44■□□□□ 0.06
GPNMB-204ENST00000459927 FAM151AQ8WW52 585 aa15.44■□□□□ 0.06
GPNMB-204ENST00000459927 ZNF112Q9UJU3 913 aa15.44■□□□□ 0.06
GPNMB-204ENST00000459927 PTCH2Q9Y6C5 1203 aa15.44■□□□□ 0.06
GPNMB-204ENST00000459927 MAST3O60307 1309 aa15.43■□□□□ 0.06
GPNMB-204ENST00000459927 CENPFP49454 3210 aa15.43■□□□□ 0.06
GPNMB-204ENST00000459927 SLC5A1P13866 664 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms