RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 LOC102724428A0A0B4J2F2 783 aa8.2□□□□□ -1.1
DDX1-204ENST00000459706 SIN3BO75182 1162 aa8.2□□□□□ -1.1
DDX1-204ENST00000459706 HNRNPMP52272 730 aaKnown RBP eCLIP8.2□□□□□ -1.1
DDX1-204ENST00000459706 SIK1P57059 783 aa8.2□□□□□ -1.1
DDX1-204ENST00000459706 C3orf58Q8NDZ4 430 aa8.2□□□□□ -1.1
DDX1-204ENST00000459706 SPATA32Q96LK8 384 aa8.2□□□□□ -1.1
DDX1-204ENST00000459706 BHLHE41Q9C0J9 482 aaPredicted RBP8.2□□□□□ -1.1
DDX1-204ENST00000459706 DZANK1Q9NVP4 752 aa8.2□□□□□ -1.1
DDX1-204ENST00000459706 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
DDX1-204ENST00000459706 EIF2AK4Q9P2K8 1649 aaKnown RBP8.19□□□□□ -1.1
DDX1-204ENST00000459706 CD33P20138 364 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 MEI1Q5TIA1 1274 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 DTHD1Q6ZMT9 781 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 RELL1Q8IUW5 271 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 TCF12Q99081 682 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 TINF2Q9BSI4 451 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 SRA1Q9HD15 236 aaKnown RBP8.19□□□□□ -1.1
DDX1-204ENST00000459706 TTF2Q9UNY4 1162 aaKnown RBP8.19□□□□□ -1.1
DDX1-204ENST00000459706 MLH3Q9UHC1 1453 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 ZMYM4Q5VZL5 1548 aa8.19□□□□□ -1.1
DDX1-204ENST00000459706 PPFIA3O75145 1194 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 ITPKAP23677 461 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 ZNF468Q5VIY5 522 aaPredicted RBP8.18□□□□□ -1.1
DDX1-204ENST00000459706 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 ZKSCAN3Q9BRR0 538 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 OXCT2Q9BYC2 517 aaPredicted RBP8.18□□□□□ -1.1
DDX1-204ENST00000459706 CAPN10Q9HC96 672 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 ABCB6Q9NP58 842 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 GMPR2Q9P2T1 348 aaKnown RBP8.18□□□□□ -1.1
DDX1-204ENST00000459706 NSFL1CQ9UNZ2 370 aaKnown RBP8.18□□□□□ -1.1
DDX1-204ENST00000459706 SPAG9O60271 1321 aaKnown RBP8.18□□□□□ -1.1
DDX1-204ENST00000459706 KIF15Q9NS87 1388 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 ERBINQ96RT1 1412 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 TRAPPC8Q9Y2L5 1435 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 MAGI2Q86UL8 1455 aa8.18□□□□□ -1.1
DDX1-204ENST00000459706 KIDINS220Q9ULH0 1771 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
DDX1-204ENST00000459706 GHRHP01286 108 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 FCGRTP55899 365 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 TNFRSF25Q93038 417 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 PBX4Q9BYU1 374 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 LATS2Q9NRM7 1088 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 HCN2Q9UL51 889 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 INPP5FQ9Y2H2 1132 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 CLSPNQ9HAW4 1339 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 ANKRD50Q9ULJ7 1429 aa8.17□□□□□ -1.1
DDX1-204ENST00000459706 NFKBIEO00221 500 aa8.16□□□□□ -1.1
DDX1-204ENST00000459706 RACK1P63244 317 aaKnown RBP8.16□□□□□ -1.1
DDX1-204ENST00000459706 ACBD3Q9H3P7 528 aa8.16□□□□□ -1.1
DDX1-204ENST00000459706 BCORL1Q5H9F3 1711 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 UNC13BO14795 1591 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 FRMPD1Q5SYB0 1578 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 ADARB2-AS1A8MUL3 147 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 C11orf95C9JLR9 678 aaPredicted RBP8.15□□□□□ -1.1
DDX1-204ENST00000459706 PDE2AO00408 941 aaPredicted RBP8.15□□□□□ -1.1
DDX1-204ENST00000459706 SMNDC1O75940 238 aaKnown RBP eCLIP8.15□□□□□ -1.1
DDX1-204ENST00000459706 ARAFP10398 606 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 BMP4P12644 408 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 MAP2K3P46734 347 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 GJA8P48165 433 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 CTBSQ01459 385 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 ARID5AQ03989 594 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 CCDC85BQ15834 202 aaPredicted RBP8.15□□□□□ -1.1
DDX1-204ENST00000459706 COL13A1Q5TAT6 717 aaPredicted RBP8.15□□□□□ -1.1
DDX1-204ENST00000459706 SYT9Q86SS6 491 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 VWA5B2Q8N398 1253 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 CNTNAP3BQ96NU0 1288 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 CNTNAP3Q9BZ76 1288 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 RRP7BPQ9NSQ0 103 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.1
DDX1-204ENST00000459706 KDM5DQ9BY66 1539 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 A0A096LPE4 126 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 A0A1W2PPZ6 126 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 ZBTB42B2RXF5 422 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 ATP2B1P20020 1258 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 ZEB1P37275 1124 aaPredicted RBP8.14□□□□□ -1.11
DDX1-204ENST00000459706 ZNF394Q53GI3 561 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 AFAP1Q8N556 730 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 TTC9Q92623 222 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 TANGO6Q9C0B7 1094 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 FRRS1LQ9P0K9 344 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 DEPDC5O75140 1603 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 ABCA6Q8N139 1617 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 REREQ9P2R6 1566 aa8.14□□□□□ -1.11
DDX1-204ENST00000459706 CDC14CA4D256 554 aa8.13□□□□□ -1.11
DDX1-204ENST00000459706 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
DDX1-204ENST00000459706 RPS26P62854 115 aaKnown RBP8.13□□□□□ -1.11
DDX1-204ENST00000459706 GRIN2CQ14957 1233 aa8.13□□□□□ -1.11
DDX1-204ENST00000459706 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
DDX1-204ENST00000459706 TMEM74Q96NL1 305 aa8.13□□□□□ -1.11
DDX1-204ENST00000459706 NSUN5Q96P11 429 aaKnown RBP8.13□□□□□ -1.11
DDX1-204ENST00000459706 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
DDX1-204ENST00000459706 DNAJB12Q9NXW2 375 aaKnown RBP8.13□□□□□ -1.11
DDX1-204ENST00000459706 PRKAG2Q9UGJ0 569 aa8.13□□□□□ -1.11
DDX1-204ENST00000459706 SAMM50Q9Y512 469 aa8.13□□□□□ -1.11
DDX1-204ENST00000459706 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.13□□□□□ -1.11
DDX1-204ENST00000459706 KDM6BO15054 1643 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms