RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 PIM2Q9P1W9 311 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 TAF6LQ9Y6J9 622 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 GAKO14976 1311 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 HSPD1P10809 573 aaKnown RBP12.56□□□□□ -0.4
NEDD9-205ENST00000459670 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
NEDD9-205ENST00000459670 MECOMQ03112 1051 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 MAP3K12Q12852 859 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 COL9A3Q14050 684 aaPredicted RBP12.56□□□□□ -0.4
NEDD9-205ENST00000459670 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
NEDD9-205ENST00000459670 ZSCAN25Q6NSZ9 544 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 MAGEB6Q8N7X4 407 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
NEDD9-205ENST00000459670 EYA3Q99504 573 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
NEDD9-205ENST00000459670 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
NEDD9-205ENST00000459670 MYH8P13535 1937 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
NEDD9-205ENST00000459670 WASHC4Q2M389 1173 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 SOGA3Q5TF21 947 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 PODNQ7Z5L7 613 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 RTKN2Q8IZC4 609 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 SUGT1Q9Y2Z0 365 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 SNX14Q9Y5W7 946 aa12.55□□□□□ -0.4
NEDD9-205ENST00000459670 SLC27A2O14975 620 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 ECE2O60344 883 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 ALX1Q15699 326 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 AOC3Q16853 763 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 DALRD3Q5D0E6 543 aaKnown RBP12.54□□□□□ -0.4
NEDD9-205ENST00000459670 DACT2Q5SW24 774 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 CREB3L3Q68CJ9 461 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
NEDD9-205ENST00000459670 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
NEDD9-205ENST00000459670 MKRN1Q9UHC7 482 aaKnown RBP12.54□□□□□ -0.4
NEDD9-205ENST00000459670 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
NEDD9-205ENST00000459670 RIMBP2O15034 1052 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 MBD4O95243 580 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 CYP21A2P08686 494 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 CHAF1AQ13111 956 aaPredicted RBP12.53□□□□□ -0.4
NEDD9-205ENST00000459670 STOX1Q6ZVD7 989 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 TBC1D22AQ8WUA7 517 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 SNX21Q969T3 373 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 TTC14Q96N46 770 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 ZC3H12CQ9C0D7 883 aaKnown RBP12.53□□□□□ -0.4
NEDD9-205ENST00000459670 KCNQ5Q9NR82 932 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 MROH7-TTC4A0A0A0MT08 1334 aa12.53□□□□□ -0.4
NEDD9-205ENST00000459670 GSG1L2A8MUP6 293 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 PPP4CP60510 307 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 RABEP1Q15276 862 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 ADCK5Q3MIX3 580 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 GMLQ99445 158 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 TM6SF1Q9BZW5 370 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.41
NEDD9-205ENST00000459670 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
NEDD9-205ENST00000459670 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
NEDD9-205ENST00000459670 FGAP02671 866 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 LDHBP07195 334 aaKnown RBP12.51□□□□□ -0.41
NEDD9-205ENST00000459670 CYP7A1P22680 504 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 RHBDL3P58872 404 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 GTF2IP78347 998 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 SPTY2D1Q68D10 685 aaPredicted RBP12.51□□□□□ -0.41
NEDD9-205ENST00000459670 NAA16Q6N069 864 aaPredicted RBP12.51□□□□□ -0.41
NEDD9-205ENST00000459670 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
NEDD9-205ENST00000459670 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 TACC3Q9Y6A5 838 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 UTRNP46939 3433 aa12.51□□□□□ -0.41
NEDD9-205ENST00000459670 GPR75-ASB3A0A0A6YYF3 556 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 IARSP41252 1262 aaKnown RBP12.5□□□□□ -0.41
NEDD9-205ENST00000459670 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
NEDD9-205ENST00000459670 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 TBC1D2Q9BYX2 928 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 ZNF277Q9NRM2 450 aaPredicted RBP12.5□□□□□ -0.41
NEDD9-205ENST00000459670 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
NEDD9-205ENST00000459670 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
NEDD9-205ENST00000459670 PRKAB2O43741 272 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 MCCP23508 829 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 ANP32AP39687 249 aaKnown RBP12.49□□□□□ -0.41
NEDD9-205ENST00000459670 GIMAP6Q6P9H5 292 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 IL27Q8NEV9 243 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 AIDAQ96BJ3 306 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms