RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	ZBED3	Q96IU2	234 aa	Predicted RBP	31.57	■■■□□ 2.64
SEMA3C-205	ENST00000458729	PRDX5	P30044	214 aa		31.56	■■■□□ 2.64
SEMA3C-205	ENST00000458729	SMC5	Q8IY18	1101 aa		31.56	■■■□□ 2.64
SEMA3C-205	ENST00000458729	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	31.56	■■■□□ 2.64
SEMA3C-205	ENST00000458729	TEKT1	Q969V4	418 aa		31.56	■■■□□ 2.64
SEMA3C-205	ENST00000458729	DCPS	Q96C86	337 aa	Known RBP	31.56	■■■□□ 2.64
SEMA3C-205	ENST00000458729	SNRK	Q9NRH2	765 aa		31.56	■■■□□ 2.64
SEMA3C-205	ENST00000458729	CRK	P46108	304 aa		31.55	■■■□□ 2.64
SEMA3C-205	ENST00000458729	NBPF9	Q3BBW0	867 aa		31.55	■■■□□ 2.64
SEMA3C-205	ENST00000458729	ANKRD45	Q5TZF3	282 aa		31.55	■■■□□ 2.64
SEMA3C-205	ENST00000458729	SPDYE2B	A6NHP3	402 aa		31.54	■■■□□ 2.64
SEMA3C-205	ENST00000458729	SPDYE6	P0CI01	402 aa		31.54	■■■□□ 2.64
SEMA3C-205	ENST00000458729	HHIPL2	Q6UWX4	724 aa		31.54	■■■□□ 2.64
SEMA3C-205	ENST00000458729	ERICH6	Q7L0X2	663 aa		31.54	■■■□□ 2.64
SEMA3C-205	ENST00000458729	MYO1B	O43795	1136 aa		31.53	■■■□□ 2.64
SEMA3C-205	ENST00000458729	ZAP70	P43403	619 aa		31.53	■■■□□ 2.64
SEMA3C-205	ENST00000458729	CDC37L1	Q7L3B6	337 aa		31.53	■■■□□ 2.64
SEMA3C-205	ENST00000458729	GGA3	Q9NZ52	723 aa		31.53	■■■□□ 2.64
SEMA3C-205	ENST00000458729	PITPNM2	Q9BZ72	1349 aa		31.53	■■■□□ 2.64
SEMA3C-205	ENST00000458729	IGSF3	O75054	1194 aa		31.52	■■■□□ 2.64
SEMA3C-205	ENST00000458729	ITGBL1	O95965	494 aa	Predicted RBP	31.52	■■■□□ 2.64
SEMA3C-205	ENST00000458729	ANGEL2	Q5VTE6	544 aa	Known RBP	31.52	■■■□□ 2.64
SEMA3C-205	ENST00000458729	GPATCH3	Q96I76	525 aa		31.52	■■■□□ 2.64
SEMA3C-205	ENST00000458729	AKAP11	Q9UKA4	1901 aa		31.52	■■■□□ 2.64
SEMA3C-205	ENST00000458729	CYP2E1	P05181	493 aa	Predicted RBP	31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	NEFL	P07196	543 aa		31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	ATP5J	P18859	108 aa		31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	TBC1D9	Q6ZT07	1266 aa		31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	DZIP1	Q86YF9	867 aa	Known RBP	31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	SLF2	Q8IX21	1173 aa		31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	PRMT6	Q96LA8	375 aa	Predicted RBP	31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	LRP2BP	Q9P2M1	347 aa		31.51	■■■□□ 2.64
SEMA3C-205	ENST00000458729	ASTN2	O75129	1339 aa	Predicted RBP	31.51	■■■□□ 2.63
SEMA3C-205	ENST00000458729	ZDHHC15	Q96MV8	337 aa		31.5	■■■□□ 2.63
SEMA3C-205	ENST00000458729	ECHDC1	Q9NTX5	307 aa		31.5	■■■□□ 2.63
SEMA3C-205	ENST00000458729	PCDHAC2	Q9Y5I4	1007 aa		31.5	■■■□□ 2.63
SEMA3C-205	ENST00000458729	KRT26	Q7Z3Y9	468 aa		31.49	■■■□□ 2.63
SEMA3C-205	ENST00000458729	SULF1	Q8IWU6	871 aa		31.49	■■■□□ 2.63
SEMA3C-205	ENST00000458729	RAI14	Q9P0K7	980 aa		31.49	■■■□□ 2.63
SEMA3C-205	ENST00000458729	GSTO1	P78417	241 aa		31.48	■■■□□ 2.63
SEMA3C-205	ENST00000458729	USP48	Q86UV5	1035 aa		31.48	■■■□□ 2.63
SEMA3C-205	ENST00000458729	GLIS2	Q9BZE0	524 aa	Predicted RBP	31.48	■■■□□ 2.63
SEMA3C-205	ENST00000458729	PASK	Q96RG2	1323 aa		31.47	■■■□□ 2.63
SEMA3C-205	ENST00000458729	MECOM	Q03112	1051 aa		31.47	■■■□□ 2.63
SEMA3C-205	ENST00000458729	TTF1	Q15361	905 aa	Predicted RBP	31.47	■■■□□ 2.63
SEMA3C-205	ENST00000458729	DIXDC1	Q155Q3	683 aa		31.47	■■■□□ 2.63
SEMA3C-205	ENST00000458729	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.47	■■■□□ 2.63
SEMA3C-205	ENST00000458729	FAM163A	Q96GL9	167 aa	Predicted RBP	31.47	■■■□□ 2.63
SEMA3C-205	ENST00000458729	LDHC	P07864	332 aa		31.46	■■■□□ 2.63
SEMA3C-205	ENST00000458729	B4GALNT3	Q6L9W6	998 aa		31.46	■■■□□ 2.63
SEMA3C-205	ENST00000458729	NSUN4	Q96CB9	384 aa	Known RBP	31.46	■■■□□ 2.63
SEMA3C-205	ENST00000458729	BOLA2	Q9H3K6	86 aa		31.46	■■■□□ 2.63
SEMA3C-205	ENST00000458729	DAGLA	Q9Y4D2	1042 aa		31.46	■■■□□ 2.63
SEMA3C-205	ENST00000458729	TTC41P	Q6P2S7	1318 aa		31.45	■■■□□ 2.63
SEMA3C-205	ENST00000458729	NUCB1	Q02818	461 aa		31.45	■■■□□ 2.62
SEMA3C-205	ENST00000458729	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.45	■■■□□ 2.62
SEMA3C-205	ENST00000458729	HAUS7	Q99871	368 aa		31.45	■■■□□ 2.62
SEMA3C-205	ENST00000458729	PIH1D3	Q9NQM4	214 aa	Known RBP	31.45	■■■□□ 2.62
SEMA3C-205	ENST00000458729	NDUFB9	Q9Y6M9	179 aa		31.45	■■■□□ 2.62
SEMA3C-205	ENST00000458729	POLR2A	P24928	1970 aa	Known RBP	31.44	■■■□□ 2.62
SEMA3C-205	ENST00000458729	SPDYE2	Q495Y8	402 aa		31.44	■■■□□ 2.62
SEMA3C-205	ENST00000458729	DNAJC2	Q99543	621 aa	Known RBP	31.44	■■■□□ 2.62
SEMA3C-205	ENST00000458729	TDRD3	Q9H7E2	651 aa	Known RBP	31.44	■■■□□ 2.62
SEMA3C-205	ENST00000458729	ZNF70	Q9UC06	446 aa	Predicted RBP	31.44	■■■□□ 2.62
SEMA3C-205	ENST00000458729	CLRN2	A0PK11	232 aa		31.43	■■■□□ 2.62
SEMA3C-205	ENST00000458729	HSPA6	P17066	643 aa		31.43	■■■□□ 2.62
SEMA3C-205	ENST00000458729	CHD1L	Q86WJ1	897 aa		31.43	■■■□□ 2.62
SEMA3C-205	ENST00000458729	ANTXR1	Q9H6X2	564 aa		31.43	■■■□□ 2.62
SEMA3C-205	ENST00000458729	GAK	O14976	1311 aa		31.43	■■■□□ 2.62
SEMA3C-205	ENST00000458729	ADM5	C9JUS6	153 aa		31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	TRAF5	O00463	557 aa		31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	ERC2	O15083	957 aa		31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	MX1	P20591	662 aa		31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	APLP1	P51693	650 aa		31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	TMED8	Q6PL24	325 aa	Predicted RBP	31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	LNPK	Q9C0E8	428 aa		31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	ECM29	Q5VYK3	1845 aa		31.42	■■■□□ 2.62
SEMA3C-205	ENST00000458729	MROH7-TTC4	A0A0A0MT08	1334 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	GOLIM4	O00461	696 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	IDH1	O75874	414 aa	Known RBP	31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	AOX1	Q06278	1338 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	MAP3K12	Q12852	859 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	OTUD7A	Q8TE49	926 aa	Predicted RBP	31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	ZNF384	Q8TF68	577 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	VEZT	Q9HBM0	779 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	PAG1	Q9NWQ8	432 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	TMOD2	Q9NZR1	351 aa		31.41	■■■□□ 2.62
SEMA3C-205	ENST00000458729	TNFAIP1	Q13829	316 aa		31.4	■■■□□ 2.62
SEMA3C-205	ENST00000458729	NAA16	Q6N069	864 aa	Predicted RBP	31.4	■■■□□ 2.62
SEMA3C-205	ENST00000458729	SALL3	Q9BXA9	1300 aa		31.39	■■■□□ 2.62
SEMA3C-205	ENST00000458729	MYH2	Q9UKX2	1941 aa		31.39	■■■□□ 2.62
SEMA3C-205	ENST00000458729	GPR75-ASB3	A0A0A6YYF3	556 aa		31.38	■■■□□ 2.61
SEMA3C-205	ENST00000458729	GLRX3	O76003	335 aa	Known RBP	31.38	■■■□□ 2.61
SEMA3C-205	ENST00000458729	PPP2R3B	Q9Y5P8	575 aa		31.38	■■■□□ 2.61
SEMA3C-205	ENST00000458729	FKBP1C	Q5VVH2	108 aa		31.37	■■■□□ 2.61
SEMA3C-205	ENST00000458729	TSHZ3	Q63HK5	1081 aa		31.37	■■■□□ 2.61
SEMA3C-205	ENST00000458729	DEFB129	Q9H1M3	183 aa		31.37	■■■□□ 2.61
SEMA3C-205	ENST00000458729	STAP2	Q9UGK3	403 aa		31.37	■■■□□ 2.61
SEMA3C-205	ENST00000458729	SCAF8	Q9UPN6	1271 aa	Known RBP	31.37	■■■□□ 2.61
SEMA3C-205	ENST00000458729	BTD	P43251	543 aa		31.36	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms