RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-227ENST00000458564 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
HDLBP-227ENST00000458564 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
HDLBP-227ENST00000458564 TDRD3Q9H7E2 651 aaKnown RBP13.18□□□□□ -0.3
HDLBP-227ENST00000458564 KIAA0100Q14667 2235 aaKnown RBP13.18□□□□□ -0.3
HDLBP-227ENST00000458564 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 CRKP46108 304 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 SP3Q02447 781 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 VGLL4Q14135 290 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDLBP-227ENST00000458564 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 TBC1D22AQ8WUA7 517 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 GCC1Q96CN9 775 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 PUS3Q9BZE2 481 aaKnown RBP13.17□□□□□ -0.3
HDLBP-227ENST00000458564 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
HDLBP-227ENST00000458564 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-227ENST00000458564 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-227ENST00000458564 TNNI2P48788 182 aa13.16□□□□□ -0.3
HDLBP-227ENST00000458564 GTF2A2P52657 109 aa13.16□□□□□ -0.3
HDLBP-227ENST00000458564 CAP1Q01518 475 aa13.16□□□□□ -0.3
HDLBP-227ENST00000458564 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
HDLBP-227ENST00000458564 VGLL2Q8N8G2 317 aa13.16□□□□□ -0.3
HDLBP-227ENST00000458564 BRI3BPQ8WY22 251 aa13.16□□□□□ -0.3
HDLBP-227ENST00000458564 TMEM39BQ9GZU3 492 aa13.16□□□□□ -0.3
HDLBP-227ENST00000458564 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
HDLBP-227ENST00000458564 TCP10L2B9ZVM9 353 aa13.15□□□□□ -0.3
HDLBP-227ENST00000458564 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
HDLBP-227ENST00000458564 FKBP1CQ5VVH2 108 aa13.15□□□□□ -0.3
HDLBP-227ENST00000458564 MRIQ9BWK5 157 aa13.15□□□□□ -0.3
HDLBP-227ENST00000458564 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
HDLBP-227ENST00000458564 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-227ENST00000458564 SUGT1Q9Y2Z0 365 aa13.15□□□□□ -0.3
HDLBP-227ENST00000458564 CSADQ9Y600 493 aa13.15□□□□□ -0.3
HDLBP-227ENST00000458564 RPAP1Q9BWH6 1393 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-227ENST00000458564 CCL15-CCL14A0A0B4J2E2 113 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 ANP32CO43423 234 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 GRIK5Q16478 980 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 CCL15Q16663 113 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 FAM83AQ86UY5 434 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 ANKRD44Q8N8A2 993 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 TEKT1Q969V4 418 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 ZNF333Q96JL9 665 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 ZDHHC15Q96MV8 337 aa13.14□□□□□ -0.31
HDLBP-227ENST00000458564 ZCCHC17Q9NP64 241 aaKnown RBP13.14□□□□□ -0.31
HDLBP-227ENST00000458564 MAST3O60307 1309 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 PDE8BO95263 885 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 ARHGEF6Q15052 776 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 TAF1CQ15572 869 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-227ENST00000458564 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 METTL24Q5JXM2 366 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 FAM43AQ8N2R8 423 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 SNCAIPQ9Y6H5 919 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 PTPRCP08575 1304 aa13.13□□□□□ -0.31
HDLBP-227ENST00000458564 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-227ENST00000458564 APOBEC3HQ6NTF7 200 aaKnown RBP13.12□□□□□ -0.31
HDLBP-227ENST00000458564 ERO1BQ86YB8 467 aa13.12□□□□□ -0.31
HDLBP-227ENST00000458564 HOOK2Q96ED9 719 aa13.12□□□□□ -0.31
HDLBP-227ENST00000458564 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
HDLBP-227ENST00000458564 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-227ENST00000458564 TLR2O60603 784 aa13.11□□□□□ -0.31
HDLBP-227ENST00000458564 FRAT2O75474 233 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-227ENST00000458564 CETPP11597 493 aa13.11□□□□□ -0.31
HDLBP-227ENST00000458564 FGFR2P21802 821 aa13.11□□□□□ -0.31
HDLBP-227ENST00000458564 PUM3Q15397 648 aaKnown RBP13.11□□□□□ -0.31
HDLBP-227ENST00000458564 HHIPL2Q6UWX4 724 aa13.11□□□□□ -0.31
HDLBP-227ENST00000458564 WRNIP1Q96S55 665 aa13.11□□□□□ -0.31
HDLBP-227ENST00000458564 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
HDLBP-227ENST00000458564 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
HDLBP-227ENST00000458564 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-227ENST00000458564 EN2P19622 333 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-227ENST00000458564 BCAMP50895 628 aa13.1□□□□□ -0.31
HDLBP-227ENST00000458564 CACNB3P54284 484 aa13.1□□□□□ -0.31
HDLBP-227ENST00000458564 PPIL2Q13356 520 aa13.1□□□□□ -0.31
HDLBP-227ENST00000458564 SNAPC2Q13487 334 aa13.1□□□□□ -0.31
HDLBP-227ENST00000458564 SLC9C1Q4G0N8 1177 aa13.1□□□□□ -0.31
HDLBP-227ENST00000458564 HABP4Q5JVS0 413 aaKnown RBP13.1□□□□□ -0.31
HDLBP-227ENST00000458564 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
HDLBP-227ENST00000458564 MRPL50Q8N5N7 158 aaKnown RBP13.1□□□□□ -0.31
HDLBP-227ENST00000458564 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
HDLBP-227ENST00000458564 IRF6O14896 467 aa13.09□□□□□ -0.31
HDLBP-227ENST00000458564 GNRH1P01148 92 aa13.09□□□□□ -0.31
HDLBP-227ENST00000458564 IFIT1P09914 478 aaKnown RBP13.09□□□□□ -0.31
HDLBP-227ENST00000458564 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-227ENST00000458564 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
HDLBP-227ENST00000458564 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
HDLBP-227ENST00000458564 USP44Q9H0E7 712 aa13.09□□□□□ -0.31
HDLBP-227ENST00000458564 PRMT2P55345 433 aa13.08□□□□□ -0.32
HDLBP-227ENST00000458564 PPATQ06203 517 aa13.08□□□□□ -0.32
HDLBP-227ENST00000458564 KLHDC4Q8TBB5 520 aa13.08□□□□□ -0.32
HDLBP-227ENST00000458564 WDR66Q8TBY9 1149 aa13.08□□□□□ -0.32
HDLBP-227ENST00000458564 ZKSCAN4Q969J2 545 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms