RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PPP2R5CQ13362 524 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 NSFL1CQ9UNZ2 370 aaKnown RBP22.15■■□□□ 1.14
SNX27-204ENST00000458013 DAAM2Q86T65 1068 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 TRIM31Q9BZY9 425 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
SNX27-204ENST00000458013 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 ANKRD44Q8N8A2 993 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 KLHDC4Q8TBB5 520 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 NLRP3Q96P20 1036 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 PSMB7Q99436 277 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 AGTPBP1Q9UPW5 1226 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 RTL9Q8NET4 1388 aa22.15■■□□□ 1.14
SNX27-204ENST00000458013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.14■■□□□ 1.14
SNX27-204ENST00000458013 EIF4A2Q14240 407 aaKnown RBP22.14■■□□□ 1.14
SNX27-204ENST00000458013 DTHD1Q6ZMT9 781 aa22.14■■□□□ 1.14
SNX27-204ENST00000458013 KRBA2Q6ZNG9 492 aa22.14■■□□□ 1.14
SNX27-204ENST00000458013 PPANQ9NQ55 473 aaKnown RBP22.14■■□□□ 1.14
SNX27-204ENST00000458013 BACH1O14867 736 aa22.14■■□□□ 1.14
SNX27-204ENST00000458013 CFAP157Q5JU67 520 aa22.14■■□□□ 1.14
SNX27-204ENST00000458013 NCOA5Q9HCD5 579 aaKnown RBP22.14■■□□□ 1.14
SNX27-204ENST00000458013 ODF2LQ9ULJ1 636 aa22.14■■□□□ 1.14
SNX27-204ENST00000458013 B4E1Z4 1266 aa22.14■■□□□ 1.13
SNX27-204ENST00000458013 CEP85Q6P2H3 762 aa22.14■■□□□ 1.13
SNX27-204ENST00000458013 NCOA1Q15788 1441 aa22.14■■□□□ 1.13
SNX27-204ENST00000458013 CCDC122Q5T0U0 273 aa22.14■■□□□ 1.13
SNX27-204ENST00000458013 CCDC77Q9BR77 488 aa22.14■■□□□ 1.13
SNX27-204ENST00000458013 ARMT1Q9H993 441 aa22.14■■□□□ 1.13
SNX27-204ENST00000458013 TOP2BQ02880 1626 aa22.14■■□□□ 1.13
SNX27-204ENST00000458013 SORBS3O60504 671 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 KSR2Q6VAB6 950 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 KSR1Q8IVT5 923 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 FAM169AQ9Y6X4 670 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 RAD51AP2Q09MP3 1159 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 OTUD7BQ6GQQ9 843 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 PIK3AP1Q6ZUJ8 805 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 MBD4O95243 580 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 NBPF11Q86T75 865 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 ZWINTO95229 277 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 ZFYP08048 801 aaPredicted RBP22.13■■□□□ 1.13
SNX27-204ENST00000458013 VIMP08670 466 aaKnown RBP22.13■■□□□ 1.13
SNX27-204ENST00000458013 PPP2R3AQ06190 1150 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 ZKSCAN5Q9Y2L8 839 aa22.13■■□□□ 1.13
SNX27-204ENST00000458013 UTP14CQ5TAP6 766 aaKnown RBP22.12■■□□□ 1.13
SNX27-204ENST00000458013 TMTC2Q8N394 836 aa22.12■■□□□ 1.13
SNX27-204ENST00000458013 CLSTN2Q9H4D0 955 aa22.12■■□□□ 1.13
SNX27-204ENST00000458013 OGFOD1Q8N543 542 aa22.12■■□□□ 1.13
SNX27-204ENST00000458013 LMBR1Q8WVP7 490 aa22.12■■□□□ 1.13
SNX27-204ENST00000458013 MYL10Q9BUA6 226 aa22.12■■□□□ 1.13
SNX27-204ENST00000458013 TTC31Q49AM3 519 aaPredicted RBP22.12■■□□□ 1.13
SNX27-204ENST00000458013 FCHSD1Q86WN1 690 aa22.12■■□□□ 1.13
SNX27-204ENST00000458013 TXNDC16Q9P2K2 825 aa22.12■■□□□ 1.13
SNX27-204ENST00000458013 OTUD7AQ8TE49 926 aaPredicted RBP22.12■■□□□ 1.13
SNX27-204ENST00000458013 LEO1Q8WVC0 666 aaPredicted RBP22.12■■□□□ 1.13
SNX27-204ENST00000458013 NOC4LQ9BVI4 516 aaKnown RBP22.12■■□□□ 1.13
SNX27-204ENST00000458013 IVLP07476 585 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 IL15P40933 162 aaPredicted RBP22.11■■□□□ 1.13
SNX27-204ENST00000458013 GEN1Q17RS7 908 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 FAM173BQ6P4H8 233 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 GJA3Q9Y6H8 435 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 CCDC169A6NNP5 214 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 USP37Q86T82 979 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 ZNF594Q96JF6 807 aaPredicted RBP22.11■■□□□ 1.13
SNX27-204ENST00000458013 BICDL2A1A5D9 508 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 CTDSPL2Q05D32 466 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 LRRC45Q96CN5 670 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 BAG1Q99933 345 aaPredicted RBP22.11■■□□□ 1.13
SNX27-204ENST00000458013 ANAPC4Q9UJX5 808 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 hCG_1642624A0A1W2PR95 340 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 BIRC3Q13489 604 aa22.11■■□□□ 1.13
SNX27-204ENST00000458013 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
SNX27-204ENST00000458013 SMC1BQ8NDV3 1235 aa22.1■■□□□ 1.13
SNX27-204ENST00000458013 PARP1P09874 1014 aaKnown RBP22.1■■□□□ 1.13
SNX27-204ENST00000458013 PRKG1Q13976 671 aa22.1■■□□□ 1.13
SNX27-204ENST00000458013 NCKAP5LQ9HCH0 1330 aa22.1■■□□□ 1.13
SNX27-204ENST00000458013 ATP2A1O14983 1001 aa22.1■■□□□ 1.13
SNX27-204ENST00000458013 SEL1L2Q5TEA6 688 aa22.1■■□□□ 1.13
SNX27-204ENST00000458013 TRAF5O00463 557 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 TAF12Q16514 161 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 SEPT14Q6ZU15 432 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 STMN4Q9H169 189 aaPredicted RBP22.09■■□□□ 1.13
SNX27-204ENST00000458013 PRPHP41219 470 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 USTQ9Y2C2 406 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 RBSNQ9H1K0 784 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 ANKRD36BQ8N2N9 1353 aa22.09■■□□□ 1.13
SNX27-204ENST00000458013 AKR1B15C9JRZ8 316 aaPredicted RBP22.08■■□□□ 1.13
SNX27-204ENST00000458013 LDHBP07195 334 aaKnown RBP22.08■■□□□ 1.13
SNX27-204ENST00000458013 PDE4DQ08499 809 aa22.08■■□□□ 1.13
SNX27-204ENST00000458013 CRCPO75575 148 aa22.08■■□□□ 1.13
SNX27-204ENST00000458013 RNF34Q969K3 372 aa22.08■■□□□ 1.13
SNX27-204ENST00000458013 BMP15O95972 392 aa22.08■■□□□ 1.13
SNX27-204ENST00000458013 FAM76AQ8TAV0 307 aa22.08■■□□□ 1.13
SNX27-204ENST00000458013 EVCP57679 992 aa22.08■■□□□ 1.13
SNX27-204ENST00000458013 SPAG1Q07617 926 aa22.08■■□□□ 1.12
SNX27-204ENST00000458013 PLEKHM2Q8IWE5 1019 aa22.08■■□□□ 1.12
SNX27-204ENST00000458013 TRIM7Q9C029 511 aa22.08■■□□□ 1.12
SNX27-204ENST00000458013 SAMD15Q9P1V8 674 aa22.08■■□□□ 1.12
SNX27-204ENST00000458013 GINS2Q9Y248 185 aa22.08■■□□□ 1.12
SNX27-204ENST00000458013 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
SNX27-204ENST00000458013 LUC7L2Q9Y383 392 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms