RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
SF3B4-202ENST00000457312 MAP3K9P80192 1104 aa21.21■□□□□ 0.99
SF3B4-202ENST00000457312 CFAP100Q494V2 611 aa21.21■□□□□ 0.99
SF3B4-202ENST00000457312 CCDC152Q4G0S7 254 aa21.21■□□□□ 0.99
SF3B4-202ENST00000457312 PLBD2Q8NHP8 589 aa21.21■□□□□ 0.99
SF3B4-202ENST00000457312 PRMT6Q96LA8 375 aaPredicted RBP21.21■□□□□ 0.99
SF3B4-202ENST00000457312 CCDC85AQ96PX6 553 aaPredicted RBP21.21■□□□□ 0.99
SF3B4-202ENST00000457312 CSADQ9Y600 493 aa21.21■□□□□ 0.99
SF3B4-202ENST00000457312 MYH3P11055 1940 aa21.2■□□□□ 0.98
SF3B4-202ENST00000457312 TEPSINQ96N21 525 aa21.2■□□□□ 0.98
SF3B4-202ENST00000457312 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
SF3B4-202ENST00000457312 SNCAIPQ9Y6H5 919 aa21.2■□□□□ 0.98
SF3B4-202ENST00000457312 KLRK1P26718 216 aa21.19■□□□□ 0.98
SF3B4-202ENST00000457312 CCT4P50991 539 aaKnown RBP21.19■□□□□ 0.98
SF3B4-202ENST00000457312 FCGRTP55899 365 aa21.19■□□□□ 0.98
SF3B4-202ENST00000457312 SNAPC2Q13487 334 aa21.19■□□□□ 0.98
SF3B4-202ENST00000457312 ANKLE1Q8NAG6 615 aa21.19■□□□□ 0.98
SF3B4-202ENST00000457312 MYLIPQ8WY64 445 aa21.19■□□□□ 0.98
SF3B4-202ENST00000457312 IRF6O14896 467 aa21.18■□□□□ 0.98
SF3B4-202ENST00000457312 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
SF3B4-202ENST00000457312 TSPYL4Q9UJ04 414 aa21.18■□□□□ 0.98
SF3B4-202ENST00000457312 ZBTB38Q8NAP3 1195 aaPredicted RBP21.17■□□□□ 0.98
SF3B4-202ENST00000457312 PXYLP1Q8TE99 480 aa21.17■□□□□ 0.98
SF3B4-202ENST00000457312 MINPP1Q9UNW1 487 aa21.17■□□□□ 0.98
SF3B4-202ENST00000457312 MDM2Q00987 491 aaPredicted RBP21.16■□□□□ 0.98
SF3B4-202ENST00000457312 TRIM28Q13263 835 aaKnown RBP21.16■□□□□ 0.98
SF3B4-202ENST00000457312 ERO1BQ86YB8 467 aa21.16■□□□□ 0.98
SF3B4-202ENST00000457312 SNX27Q96L92 541 aa21.16■□□□□ 0.98
SF3B4-202ENST00000457312 NBPF3Q9H094 633 aa21.16■□□□□ 0.98
SF3B4-202ENST00000457312 BCRP11274 1271 aa21.15■□□□□ 0.98
SF3B4-202ENST00000457312 FLT3LGP49771 235 aa21.15■□□□□ 0.98
SF3B4-202ENST00000457312 PPIL2Q13356 520 aa21.15■□□□□ 0.98
SF3B4-202ENST00000457312 TNFAIP1Q13829 316 aa21.15■□□□□ 0.98
SF3B4-202ENST00000457312 ANKRD23Q86SG2 305 aa21.15■□□□□ 0.98
SF3B4-202ENST00000457312 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.15■□□□□ 0.98
SF3B4-202ENST00000457312 SEMA6BQ9H3T3 888 aa21.15■□□□□ 0.98
SF3B4-202ENST00000457312 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
SF3B4-202ENST00000457312 PDHXO00330 501 aa21.14■□□□□ 0.97
SF3B4-202ENST00000457312 FOSL2P15408 326 aa21.14■□□□□ 0.97
SF3B4-202ENST00000457312 CNGB1Q14028 1251 aaPredicted RBP21.14■□□□□ 0.97
SF3B4-202ENST00000457312 C11orf49Q9H6J7 331 aa21.14■□□□□ 0.97
SF3B4-202ENST00000457312 MUC6Q6W4X9 2439 aa21.13■□□□□ 0.97
SF3B4-202ENST00000457312 PDE8AO60658 829 aa21.13■□□□□ 0.97
SF3B4-202ENST00000457312 HSP90B1P14625 803 aaKnown RBP21.13■□□□□ 0.97
SF3B4-202ENST00000457312 SPDYE2Q495Y8 402 aa21.13■□□□□ 0.97
SF3B4-202ENST00000457312 CHPF2Q9P2E5 772 aa21.13■□□□□ 0.97
SF3B4-202ENST00000457312 PFASO15067 1338 aa21.12■□□□□ 0.97
SF3B4-202ENST00000457312 IRF5Q13568 498 aa21.12■□□□□ 0.97
SF3B4-202ENST00000457312 BSDC1Q9NW68 430 aaPredicted RBP21.12■□□□□ 0.97
SF3B4-202ENST00000457312 MAST2Q6P0Q8 1798 aa21.12■□□□□ 0.97
SF3B4-202ENST00000457312 CACNA1AO00555 2505 aa21.12■□□□□ 0.97
SF3B4-202ENST00000457312 LTBP2Q14767 1821 aa21.11■□□□□ 0.97
SF3B4-202ENST00000457312 USP38Q8NB14 1042 aa21.11■□□□□ 0.97
SF3B4-202ENST00000457312 CDC5LQ99459 802 aaKnown RBP21.11■□□□□ 0.97
SF3B4-202ENST00000457312 TMEM39BQ9GZU3 492 aa21.11■□□□□ 0.97
SF3B4-202ENST00000457312 TTYH1Q9H313 450 aaPredicted RBP21.11■□□□□ 0.97
SF3B4-202ENST00000457312 ZNF70Q9UC06 446 aaPredicted RBP21.11■□□□□ 0.97
SF3B4-202ENST00000457312 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.1■□□□□ 0.97
SF3B4-202ENST00000457312 CD209Q9NNX6 404 aa21.1■□□□□ 0.97
SF3B4-202ENST00000457312 LEMD3Q9Y2U8 911 aa21.1■□□□□ 0.97
SF3B4-202ENST00000457312 ARIH1Q9Y4X5 557 aaPredicted RBP21.1■□□□□ 0.97
SF3B4-202ENST00000457312 A0A1B0GUL6 1792 aa21.1■□□□□ 0.97
SF3B4-202ENST00000457312 ZKSCAN4Q969J2 545 aaPredicted RBP21.09■□□□□ 0.97
SF3B4-202ENST00000457312 RBM5P52756 815 aaKnown RBP eCLIP21.08■□□□□ 0.97
SF3B4-202ENST00000457312 MOGSQ13724 837 aa21.08■□□□□ 0.97
SF3B4-202ENST00000457312 WRNIP1Q96S55 665 aa21.08■□□□□ 0.97
SF3B4-202ENST00000457312 PARK7Q99497 189 aaKnown RBP21.08■□□□□ 0.97
SF3B4-202ENST00000457312 DNAH12Q6ZR08 3092 aa21.08■□□□□ 0.96
SF3B4-202ENST00000457312 PCCAP05165 728 aaPredicted RBP21.07■□□□□ 0.96
SF3B4-202ENST00000457312 NFE2L2Q16236 605 aa21.07■□□□□ 0.96
SF3B4-202ENST00000457312 JARID2Q92833 1246 aaPredicted RBP21.07■□□□□ 0.96
SF3B4-202ENST00000457312 TCP10L2B9ZVM9 353 aa21.06■□□□□ 0.96
SF3B4-202ENST00000457312 TDRD3Q9H7E2 651 aaKnown RBP21.06■□□□□ 0.96
SF3B4-202ENST00000457312 CYP2C8P10632 490 aa21.05■□□□□ 0.96
SF3B4-202ENST00000457312 CTSWP56202 376 aa21.05■□□□□ 0.96
SF3B4-202ENST00000457312 FKBP1AP62942 108 aaKnown RBP21.05■□□□□ 0.96
SF3B4-202ENST00000457312 PPATQ06203 517 aa21.05■□□□□ 0.96
SF3B4-202ENST00000457312 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
SF3B4-202ENST00000457312 TAOK2Q9UL54 1235 aa21.05■□□□□ 0.96
SF3B4-202ENST00000457312 AK9Q5TCS8 1911 aa21.05■□□□□ 0.96
SF3B4-202ENST00000457312 ADAMTS19Q8TE59 1207 aa21.04■□□□□ 0.96
SF3B4-202ENST00000457312 OGDHLQ9ULD0 1010 aa21.04■□□□□ 0.96
SF3B4-202ENST00000457312 KCNH4Q9UQ05 1017 aa21.04■□□□□ 0.96
SF3B4-202ENST00000457312 TNPO2O14787 897 aaKnown RBP21.03■□□□□ 0.96
SF3B4-202ENST00000457312 LRRC26Q2I0M4 334 aa21.03■□□□□ 0.96
SF3B4-202ENST00000457312 GREM2Q9H772 168 aa21.03■□□□□ 0.96
SF3B4-202ENST00000457312 PLEKHF1Q96S99 279 aa21.02■□□□□ 0.96
SF3B4-202ENST00000457312 JAG2Q9Y219 1238 aa21.02■□□□□ 0.96
SF3B4-202ENST00000457312 HCN4Q9Y3Q4 1203 aa21.02■□□□□ 0.96
SF3B4-202ENST00000457312 PTPRFP10586 1907 aa21.02■□□□□ 0.95
SF3B4-202ENST00000457312 NEFMP07197 916 aa21.01■□□□□ 0.95
SF3B4-202ENST00000457312 COL6A1P12109 1028 aa21.01■□□□□ 0.95
SF3B4-202ENST00000457312 BABAM1Q9NWV8 329 aa21.01■□□□□ 0.95
SF3B4-202ENST00000457312 FRMPD3Q5JV73 1810 aa21■□□□□ 0.95
SF3B4-202ENST00000457312 HMGCRP04035 888 aa21■□□□□ 0.95
SF3B4-202ENST00000457312 TNNI2P48788 182 aa21■□□□□ 0.95
SF3B4-202ENST00000457312 HDGFL1Q5TGJ6 251 aa21■□□□□ 0.95
SF3B4-202ENST00000457312 GPAT2Q6NUI2 795 aa21■□□□□ 0.95
SF3B4-202ENST00000457312 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
SF3B4-202ENST00000457312 TTLL11Q8NHH1 800 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms