RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 IGHDP01880 384 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
ATG4A-206ENST00000457035 CHAF1AQ13111 956 aaPredicted RBP12.35□□□□□ -0.43
ATG4A-206ENST00000457035 RASGRF1Q13972 1273 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 GRIK5Q16478 980 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 MFSD14BQ5SR56 506 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 GORABQ5T7V8 394 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 USP50Q70EL3 339 aaPredicted RBP12.35□□□□□ -0.43
ATG4A-206ENST00000457035 SAMD7Q7Z3H4 446 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 AACSQ86V21 672 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
ATG4A-206ENST00000457035 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
ATG4A-206ENST00000457035 DENND2AQ9ULE3 1009 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 CENPBP07199 599 aaPredicted RBP12.34□□□□□ -0.43
ATG4A-206ENST00000457035 HSPA1AP0DMV8 641 aaKnown RBP12.34□□□□□ -0.43
ATG4A-206ENST00000457035 HSPA1BP0DMV9 641 aaKnown RBP12.34□□□□□ -0.43
ATG4A-206ENST00000457035 MMP14P50281 582 aa12.34□□□□□ -0.43
ATG4A-206ENST00000457035 CCDC158Q5M9N0 1113 aa12.34□□□□□ -0.43
ATG4A-206ENST00000457035 KIAA0825Q8IV33 1275 aa12.34□□□□□ -0.43
ATG4A-206ENST00000457035 WDR66Q8TBY9 1149 aa12.34□□□□□ -0.43
ATG4A-206ENST00000457035 TRPM4Q8TD43 1214 aa12.34□□□□□ -0.43
ATG4A-206ENST00000457035 TBC1D22AQ8WUA7 517 aa12.34□□□□□ -0.43
ATG4A-206ENST00000457035 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
ATG4A-206ENST00000457035 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
ATG4A-206ENST00000457035 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
ATG4A-206ENST00000457035 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 UQCRFS1P1P0C7P4 283 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 MCAMP43121 646 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 SCARF1Q14162 830 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 TBC1D10BQ4KMP7 808 aaPredicted RBP12.33□□□□□ -0.44
ATG4A-206ENST00000457035 EAPPQ56P03 285 aaPredicted RBP12.33□□□□□ -0.44
ATG4A-206ENST00000457035 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
ATG4A-206ENST00000457035 OGFOD1Q8N543 542 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 MYOZ2Q9NPC6 264 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 HMG20BQ9P0W2 317 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
ATG4A-206ENST00000457035 PGAP2Q9UHJ9 254 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 PDS5AQ29RF7 1337 aaKnown RBP12.33□□□□□ -0.44
ATG4A-206ENST00000457035 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
ATG4A-206ENST00000457035 PCNTO95613 3336 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 TRPM7Q96QT4 1865 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 F8W031 263 aaPredicted RBP12.32□□□□□ -0.44
ATG4A-206ENST00000457035 IFIT2P09913 472 aaKnown RBP12.32□□□□□ -0.44
ATG4A-206ENST00000457035 TTC39AQ5SRH9 613 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 PI16Q6UXB8 463 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
ATG4A-206ENST00000457035 SMC5Q8IY18 1101 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 TNS4Q8IZW8 715 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 ZBED3Q96IU2 234 aaPredicted RBP12.32□□□□□ -0.44
ATG4A-206ENST00000457035 MRIQ9BWK5 157 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 SUGT1Q9Y2Z0 365 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
ATG4A-206ENST00000457035 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
ATG4A-206ENST00000457035 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
ATG4A-206ENST00000457035 ZC3H15Q8WU90 426 aaKnown RBP12.31□□□□□ -0.44
ATG4A-206ENST00000457035 HDAC9Q9UKV0 1011 aa12.31□□□□□ -0.44
ATG4A-206ENST00000457035 TTF2Q9UNY4 1162 aaKnown RBP12.31□□□□□ -0.44
ATG4A-206ENST00000457035 WNT10BO00744 389 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 ITGBL1O95965 494 aaPredicted RBP12.3□□□□□ -0.44
ATG4A-206ENST00000457035 PRDX5P30044 214 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
ATG4A-206ENST00000457035 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 TBC1D9Q6ZT07 1266 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 PRMT6Q96LA8 375 aaPredicted RBP12.3□□□□□ -0.44
ATG4A-206ENST00000457035 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 SERPINA10Q9UK55 444 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 PCDHAC2Q9Y5I4 1007 aa12.3□□□□□ -0.44
ATG4A-206ENST00000457035 CYP2E1P05181 493 aaPredicted RBP12.29□□□□□ -0.44
ATG4A-206ENST00000457035 LDHBP07195 334 aaKnown RBP12.29□□□□□ -0.44
ATG4A-206ENST00000457035 ZAP70P43403 619 aa12.29□□□□□ -0.44
ATG4A-206ENST00000457035 CFAP100Q494V2 611 aa12.29□□□□□ -0.44
ATG4A-206ENST00000457035 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
ATG4A-206ENST00000457035 CNTROBQ8N137 903 aa12.29□□□□□ -0.44
ATG4A-206ENST00000457035 ZGPATQ8N5A5 531 aaKnown RBP12.29□□□□□ -0.44
ATG4A-206ENST00000457035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
ATG4A-206ENST00000457035 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
ATG4A-206ENST00000457035 ECM29Q5VYK3 1845 aa12.29□□□□□ -0.44
ATG4A-206ENST00000457035 ASTN2O75129 1339 aaPredicted RBP12.29□□□□□ -0.44
ATG4A-206ENST00000457035 ATP5JP18859 108 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 CRKP46108 304 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 DLGAP5Q15398 846 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 HHIPL2Q6UWX4 724 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 ZNF384Q8TF68 577 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 PASKQ96RG2 1323 aa12.28□□□□□ -0.44
ATG4A-206ENST00000457035 SPTY2D1Q68D10 685 aaPredicted RBP12.27□□□□□ -0.45
ATG4A-206ENST00000457035 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 APOBEC3HQ6NTF7 200 aaKnown RBP12.27□□□□□ -0.45
ATG4A-206ENST00000457035 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 OTUD7AQ8TE49 926 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms