RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 JAK2O60674 1132 aa12.96□□□□□ -0.33
CSPG4P10-201ENST00000456932 TAF5LO75529 589 aa12.96□□□□□ -0.33
CSPG4P10-201ENST00000456932 ZAP70P43403 619 aa12.96□□□□□ -0.33
CSPG4P10-201ENST00000456932 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.33
CSPG4P10-201ENST00000456932 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P10-201ENST00000456932 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
CSPG4P10-201ENST00000456932 C6orf229H3BNL8 230 aa12.96□□□□□ -0.34
CSPG4P10-201ENST00000456932 NCOA5Q9HCD5 579 aaKnown RBP12.96□□□□□ -0.34
CSPG4P10-201ENST00000456932 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 PCCAP05165 728 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 ST5P78524 1137 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 LUC7LQ9NQ29 371 aaKnown RBP12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 C10orf67Q8IYJ2 551 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 CNNM3Q8NE01 707 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 DNAJC25Q9H1X3 360 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 PARP10Q53GL7 1025 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 TTC12Q9H892 705 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 GNAT2P19087 354 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 ZNF589Q86UQ0 364 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 ZBTB38Q8NAP3 1195 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 MKNK2Q9HBH9 465 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 GPR108Q9NPR9 543 aa12.95□□□□□ -0.34
CSPG4P10-201ENST00000456932 E7EWF7 191 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 RTN1Q16799 776 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 JAKMIP3Q5VZ66 844 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 TMTC2Q8N394 836 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 ESR2Q92731 530 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 FAM107BQ9H098 131 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 MBD4O95243 580 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 ATL3Q6DD88 541 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 ZNF287Q9HBT7 754 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 ZNHIT6Q9NWK9 470 aaKnown RBP12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 SPTLC2O15270 562 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 LEO1Q8WVC0 666 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P10-201ENST00000456932 SLIT1O75093 1534 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 CTSWP56202 376 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 LPIN2Q92539 896 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 CIAO1O76071 339 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 SYKP43405 635 aa12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 RNF187Q5TA31 235 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P10-201ENST00000456932 HSPD1P10809 573 aaKnown RBP12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 RXRAP19793 462 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 NECTIN1Q15223 517 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 MAGEB6P1A0A0J9YX57 407 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 EPS15P42566 896 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 RSPH14Q9UHP6 348 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 B4E1Z4 1266 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 CCDC181Q5TID7 509 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 PAXBP1Q9Y5B6 917 aa12.92□□□□□ -0.34
CSPG4P10-201ENST00000456932 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 NEMFO60524 1076 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 PDE4BQ07343 736 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 ARHGAP29Q52LW3 1261 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 CDK5RAP3Q96JB5 506 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 RASSF4Q9H2L5 321 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 SPTY2D1Q68D10 685 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 ANGEL1Q9UNK9 670 aaKnown RBP12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 H7C1W4 665 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 ZNF444Q8N0Y2 327 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 LARGE1O95461 756 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 NLRP5P59047 1200 aa12.91□□□□□ -0.34
CSPG4P10-201ENST00000456932 ISM2Q6H9L7 571 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms