RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 MRIQ9BWK5 157 aa22.19■■□□□ 1.14
MSH6-207ENST00000456246 SAGE1Q9NXZ1 904 aa22.19■■□□□ 1.14
MSH6-207ENST00000456246 PCDHAC2Q9Y5I4 1007 aa22.19■■□□□ 1.14
MSH6-207ENST00000456246 UBE2Q2LH0YL09 131 aa22.18■■□□□ 1.14
MSH6-207ENST00000456246 SEMA3EO15041 775 aa22.18■■□□□ 1.14
MSH6-207ENST00000456246 PPP1R12BO60237 982 aaPredicted RBP22.18■■□□□ 1.14
MSH6-207ENST00000456246 FTSJ3Q8IY81 847 aaKnown RBP22.18■■□□□ 1.14
MSH6-207ENST00000456246 DZIP1LQ8IYY4 767 aaKnown RBP22.18■■□□□ 1.14
MSH6-207ENST00000456246 TEKT1Q969V4 418 aa22.18■■□□□ 1.14
MSH6-207ENST00000456246 ZIC5Q96T25 663 aa22.18■■□□□ 1.14
MSH6-207ENST00000456246 PA2G4Q9UQ80 394 aaKnown RBP22.18■■□□□ 1.14
MSH6-207ENST00000456246 UNCXA6NJT0 531 aa22.17■■□□□ 1.14
MSH6-207ENST00000456246 MOB2Q70IA6 237 aa22.17■■□□□ 1.14
MSH6-207ENST00000456246 ZNF70Q9UC06 446 aaPredicted RBP22.17■■□□□ 1.14
MSH6-207ENST00000456246 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
MSH6-207ENST00000456246 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
MSH6-207ENST00000456246 AKAP2Q9Y2D5 859 aa22.16■■□□□ 1.14
MSH6-207ENST00000456246 TNNI2P48788 182 aa22.15■■□□□ 1.14
MSH6-207ENST00000456246 RASA3Q14644 834 aa22.15■■□□□ 1.14
MSH6-207ENST00000456246 LDLRAD1Q5T700 205 aa22.15■■□□□ 1.14
MSH6-207ENST00000456246 ZDHHC15Q96MV8 337 aa22.15■■□□□ 1.14
MSH6-207ENST00000456246 TDRD3Q9H7E2 651 aaKnown RBP22.15■■□□□ 1.14
MSH6-207ENST00000456246 ANGEL1Q9UNK9 670 aaKnown RBP22.15■■□□□ 1.14
MSH6-207ENST00000456246 TNNQ9UQP3 1299 aa22.15■■□□□ 1.14
MSH6-207ENST00000456246 AKAP11Q9UKA4 1901 aa22.15■■□□□ 1.14
MSH6-207ENST00000456246 CSRNP1Q96S65 589 aa22.14■■□□□ 1.13
MSH6-207ENST00000456246 TMOD2Q9NZR1 351 aa22.14■■□□□ 1.13
MSH6-207ENST00000456246 DENND2AQ9ULE3 1009 aa22.14■■□□□ 1.13
MSH6-207ENST00000456246 SSC5DA1L4H1 1573 aa22.13■■□□□ 1.13
MSH6-207ENST00000456246 AOX1Q06278 1338 aa22.13■■□□□ 1.13
MSH6-207ENST00000456246 SALL1Q9NSC2 1324 aa22.13■■□□□ 1.13
MSH6-207ENST00000456246 GRIK5Q16478 980 aa22.13■■□□□ 1.13
MSH6-207ENST00000456246 HHIPL2Q6UWX4 724 aa22.13■■□□□ 1.13
MSH6-207ENST00000456246 TSKSQ9UJT2 592 aa22.13■■□□□ 1.13
MSH6-207ENST00000456246 IREB2P48200 963 aaKnown RBP22.12■■□□□ 1.13
MSH6-207ENST00000456246 PRKG1Q13976 671 aa22.12■■□□□ 1.13
MSH6-207ENST00000456246 ZGPATQ8N5A5 531 aaKnown RBP22.12■■□□□ 1.13
MSH6-207ENST00000456246 PDS5AQ29RF7 1337 aaKnown RBP22.11■■□□□ 1.13
MSH6-207ENST00000456246 SREBF2Q12772 1141 aa22.11■■□□□ 1.13
MSH6-207ENST00000456246 MVPQ14764 893 aaKnown RBP22.11■■□□□ 1.13
MSH6-207ENST00000456246 NBPF12Q5TAG4 269 aaPredicted RBP22.11■■□□□ 1.13
MSH6-207ENST00000456246 FKBP1CQ5VVH2 108 aa22.11■■□□□ 1.13
MSH6-207ENST00000456246 A0A1B0GUL7 405 aa22.1■■□□□ 1.13
MSH6-207ENST00000456246 PHKA1P46020 1223 aa22.1■■□□□ 1.13
MSH6-207ENST00000456246 CCDC102BQ68D86 513 aa22.1■■□□□ 1.13
MSH6-207ENST00000456246 RNF186Q9NXI6 227 aa22.1■■□□□ 1.13
MSH6-207ENST00000456246 TCP10L2B9ZVM9 353 aa22.09■■□□□ 1.13
MSH6-207ENST00000456246 LDHBP07195 334 aaKnown RBP22.09■■□□□ 1.13
MSH6-207ENST00000456246 MS4A1P11836 297 aa22.09■■□□□ 1.13
MSH6-207ENST00000456246 TFCP2Q12800 502 aa22.09■■□□□ 1.13
MSH6-207ENST00000456246 G3BP1Q13283 466 aaKnown RBP eCLIP22.09■■□□□ 1.138e-7■■■■□ 26
MSH6-207ENST00000456246 FAM83AQ86UY5 434 aa22.09■■□□□ 1.13
MSH6-207ENST00000456246 ITPRIPQ8IWB1 547 aa22.09■■□□□ 1.13
MSH6-207ENST00000456246 HOOK2Q96ED9 719 aa22.09■■□□□ 1.13
MSH6-207ENST00000456246 PNMA6EA0A0J9YXQ4 647 aa22.08■■□□□ 1.13
MSH6-207ENST00000456246 TRPA1O75762 1119 aa22.08■■□□□ 1.13
MSH6-207ENST00000456246 ZBTB48P10074 688 aaPredicted RBP22.08■■□□□ 1.13
MSH6-207ENST00000456246 TM4SF4P48230 202 aa22.08■■□□□ 1.13
MSH6-207ENST00000456246 APOBEC3HQ6NTF7 200 aaKnown RBP22.08■■□□□ 1.13
MSH6-207ENST00000456246 ANKRD13AQ8IZ07 590 aa22.08■■□□□ 1.13
MSH6-207ENST00000456246 SLC10A4Q96EP9 437 aa22.08■■□□□ 1.13
MSH6-207ENST00000456246 ADORA1P30542 326 aa22.07■■□□□ 1.12
MSH6-207ENST00000456246 TIMM10P62072 90 aa22.07■■□□□ 1.12
MSH6-207ENST00000456246 SPRYD7Q5W111 196 aa22.07■■□□□ 1.12
MSH6-207ENST00000456246 XAGE2Q96GT9 111 aa22.07■■□□□ 1.12
MSH6-207ENST00000456246 TEPSINQ96N21 525 aa22.07■■□□□ 1.12
MSH6-207ENST00000456246 RPAP1Q9BWH6 1393 aaPredicted RBP22.07■■□□□ 1.12
MSH6-207ENST00000456246 USP2O75604 605 aaPredicted RBP22.06■■□□□ 1.12
MSH6-207ENST00000456246 PRDX5P30044 214 aa22.06■■□□□ 1.12
MSH6-207ENST00000456246 INHBEP58166 350 aa22.06■■□□□ 1.12
MSH6-207ENST00000456246 POLA2Q14181 598 aa22.06■■□□□ 1.12
MSH6-207ENST00000456246 SSH3Q8TE77 659 aa22.06■■□□□ 1.12
MSH6-207ENST00000456246 CASP8AP2Q9UKL3 1982 aa22.06■■□□□ 1.12
MSH6-207ENST00000456246 MANSC4A6NHS7 340 aaPredicted RBP22.05■■□□□ 1.12
MSH6-207ENST00000456246 ZBTB7BO15156 539 aaPredicted RBP22.05■■□□□ 1.12
MSH6-207ENST00000456246 CAPN15O75808 1086 aa22.05■■□□□ 1.12
MSH6-207ENST00000456246 RLBP1P12271 317 aa22.05■■□□□ 1.12
MSH6-207ENST00000456246 ATP8B2P98198 1209 aa22.05■■□□□ 1.12
MSH6-207ENST00000456246 RASGRF1Q13972 1273 aa22.05■■□□□ 1.12
MSH6-207ENST00000456246 SPTY2D1Q68D10 685 aaPredicted RBP22.05■■□□□ 1.12
MSH6-207ENST00000456246 SLF2Q8IX21 1173 aa22.05■■□□□ 1.12
MSH6-207ENST00000456246 TMEM39BQ9GZU3 492 aa22.05■■□□□ 1.12
MSH6-207ENST00000456246 FZD1Q9UP38 647 aa22.05■■□□□ 1.12
MSH6-207ENST00000456246 LAMB1P07942 1786 aa22.04■■□□□ 1.12
MSH6-207ENST00000456246 GORABQ5T7V8 394 aa22.04■■□□□ 1.12
MSH6-207ENST00000456246 WNK4Q96J92 1243 aa22.04■■□□□ 1.12
MSH6-207ENST00000456246 NEUROD6Q96NK8 337 aa22.04■■□□□ 1.12
MSH6-207ENST00000456246 GPR108Q9NPR9 543 aa22.04■■□□□ 1.12
MSH6-207ENST00000456246 DAGLAQ9Y4D2 1042 aa22.04■■□□□ 1.12
MSH6-207ENST00000456246 ALDH1A1P00352 501 aa22.03■■□□□ 1.12
MSH6-207ENST00000456246 MKRN3Q13064 507 aaKnown RBP22.03■■□□□ 1.12
MSH6-207ENST00000456246 CLMNQ96JQ2 1002 aa22.03■■□□□ 1.12
MSH6-207ENST00000456246 CACNB3P54284 484 aa22.02■■□□□ 1.12
MSH6-207ENST00000456246 OS9Q13438 667 aaPredicted RBP22.02■■□□□ 1.12
MSH6-207ENST00000456246 DIXDC1Q155Q3 683 aa22.02■■□□□ 1.12
MSH6-207ENST00000456246 NOM1Q5C9Z4 860 aaKnown RBP22.02■■□□□ 1.12
MSH6-207ENST00000456246 DZIP1Q86YF9 867 aaKnown RBP22.02■■□□□ 1.12
MSH6-207ENST00000456246 ABHD8Q96I13 439 aa22.02■■□□□ 1.12
MSH6-207ENST00000456246 CFHR5Q9BXR6 569 aa22.02■■□□□ 1.12
MSH6-207ENST00000456246 OTOFQ9HC10 1997 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms