RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 SLC5A1P13866 664 aa15.48■□□□□ 0.07
SMCR2-201ENST00000456090 TNFAIP1Q13829 316 aa15.48■□□□□ 0.07
SMCR2-201ENST00000456090 MAP3K11Q16584 847 aa15.48■□□□□ 0.07
SMCR2-201ENST00000456090 ATG9AQ7Z3C6 839 aa15.48■□□□□ 0.07
SMCR2-201ENST00000456090 LPIN2Q92539 896 aa15.48■□□□□ 0.07
SMCR2-201ENST00000456090 TM4SF4P48230 202 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 SREBF2Q12772 1141 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 SPRYD7Q5W111 196 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 ARHGAP45Q92619 1136 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 SLC10A4Q96EP9 437 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 MEIS3Q99687 375 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 HDAC5Q9UQL6 1122 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 MYH2Q9UKX2 1941 aa15.47■□□□□ 0.07
SMCR2-201ENST00000456090 TCP10L2B9ZVM9 353 aa15.46■□□□□ 0.07
SMCR2-201ENST00000456090 CIAO1O76071 339 aa15.46■□□□□ 0.07
SMCR2-201ENST00000456090 TBC1D8O95759 1140 aa15.46■□□□□ 0.07
SMCR2-201ENST00000456090 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
SMCR2-201ENST00000456090 TEKT1Q969V4 418 aa15.46■□□□□ 0.07
SMCR2-201ENST00000456090 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.07
SMCR2-201ENST00000456090 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
SMCR2-201ENST00000456090 TNRC18O15417 2968 aaPredicted RBP15.45■□□□□ 0.06
SMCR2-201ENST00000456090 USP2O75604 605 aaPredicted RBP15.45■□□□□ 0.06
SMCR2-201ENST00000456090 HDLBPQ00341 1268 aaKnown RBP15.45■□□□□ 0.06
SMCR2-201ENST00000456090 TMEM39BQ9GZU3 492 aa15.45■□□□□ 0.06
SMCR2-201ENST00000456090 CEP126Q9P2H0 1117 aa15.45■□□□□ 0.06
SMCR2-201ENST00000456090 PA2G4Q9UQ80 394 aaKnown RBP15.45■□□□□ 0.06
SMCR2-201ENST00000456090 HTTP42858 3142 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 UNCXA6NJT0 531 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 ZBTB48P10074 688 aaPredicted RBP15.44■□□□□ 0.06
SMCR2-201ENST00000456090 IL15P40933 162 aaPredicted RBP15.44■□□□□ 0.06
SMCR2-201ENST00000456090 TNNI2P48788 182 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
SMCR2-201ENST00000456090 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 ZDHHC15Q96MV8 337 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 TEPSINQ96N21 525 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 SUGT1Q9Y2Z0 365 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 BRCA2P51587 3418 aa15.44■□□□□ 0.06
SMCR2-201ENST00000456090 MAST3O60307 1309 aa15.43■□□□□ 0.06
SMCR2-201ENST00000456090 IPO8O15397 1037 aaKnown RBP15.43■□□□□ 0.06
SMCR2-201ENST00000456090 BCAR3O75815 825 aa15.43■□□□□ 0.06
SMCR2-201ENST00000456090 TRIM27P14373 513 aa15.43■□□□□ 0.06
SMCR2-201ENST00000456090 CACNB3P54284 484 aa15.43■□□□□ 0.06
SMCR2-201ENST00000456090 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
SMCR2-201ENST00000456090 ZNF296Q8WUU4 475 aaPredicted RBP15.43■□□□□ 0.06
SMCR2-201ENST00000456090 FRAT1Q92837 279 aaPredicted RBP15.43■□□□□ 0.06
SMCR2-201ENST00000456090 WNK4Q96J92 1243 aa15.43■□□□□ 0.06
SMCR2-201ENST00000456090 MRIQ9BWK5 157 aa15.43■□□□□ 0.06
SMCR2-201ENST00000456090 MANSC4A6NHS7 340 aaPredicted RBP15.42■□□□□ 0.06
SMCR2-201ENST00000456090 GNAI3P08754 354 aa15.42■□□□□ 0.06
SMCR2-201ENST00000456090 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
SMCR2-201ENST00000456090 CTU1Q7Z7A3 348 aaKnown RBP15.42■□□□□ 0.06
SMCR2-201ENST00000456090 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
SMCR2-201ENST00000456090 MIER1Q8N108 512 aa15.42■□□□□ 0.06
SMCR2-201ENST00000456090 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
SMCR2-201ENST00000456090 GNL3LQ9NVN8 582 aaKnown RBP15.42■□□□□ 0.06
SMCR2-201ENST00000456090 SRGAP3O43295 1099 aa15.41■□□□□ 0.06
SMCR2-201ENST00000456090 INHBEP58166 350 aa15.41■□□□□ 0.06
SMCR2-201ENST00000456090 HNRNPUQ00839 825 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMCR2-201ENST00000456090 DIEXFQ68CQ4 756 aaKnown RBP15.41■□□□□ 0.06
SMCR2-201ENST00000456090 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
SMCR2-201ENST00000456090 IFNL1Q8IU54 200 aa15.41■□□□□ 0.06
SMCR2-201ENST00000456090 TMOD2Q9NZR1 351 aa15.41■□□□□ 0.06
SMCR2-201ENST00000456090 TNNQ9UQP3 1299 aa15.41■□□□□ 0.06
SMCR2-201ENST00000456090 GPR25O00155 361 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 ALDH1A1P00352 501 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 GJA5P36382 358 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 PHKA1P46020 1223 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 HHIPL2Q6UWX4 724 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 CLUAP1Q96AJ1 413 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 CFHR5Q9BXR6 569 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 R3HDMLQ9H3Y0 253 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 ELP3Q9H9T3 547 aa15.4■□□□□ 0.06
SMCR2-201ENST00000456090 IGF2BP3O00425 579 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMCR2-201ENST00000456090 ADORA1P30542 326 aa15.39■□□□□ 0.05
SMCR2-201ENST00000456090 NOM1Q5C9Z4 860 aaKnown RBP15.39■□□□□ 0.05
SMCR2-201ENST00000456090 FKBP1CQ5VVH2 108 aa15.39■□□□□ 0.05
SMCR2-201ENST00000456090 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.39■□□□□ 0.05
SMCR2-201ENST00000456090 FAM83AQ86UY5 434 aa15.39■□□□□ 0.05
SMCR2-201ENST00000456090 OPTNQ96CV9 577 aa15.39■□□□□ 0.05
SMCR2-201ENST00000456090 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 GNAI2P04899 355 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 LDHBP07195 334 aaKnown RBP15.38■□□□□ 0.05
SMCR2-201ENST00000456090 PRDX5P30044 214 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 MAP3K9P80192 1104 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 MTX1Q13505 466 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 VGLL4Q14135 290 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 DIXDC1Q155Q3 683 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 CCDC102BQ68D86 513 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMCR2-201ENST00000456090 DENND2AQ9ULE3 1009 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 DAGLAQ9Y4D2 1042 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 PDE4DIPQ5VU43 2346 aa15.38■□□□□ 0.05
SMCR2-201ENST00000456090 MKI67P46013 3256 aaKnown RBP15.37■□□□□ 0.05
SMCR2-201ENST00000456090 SEMA3EO15041 775 aa15.37■□□□□ 0.05
SMCR2-201ENST00000456090 FKTNO75072 461 aa15.37■□□□□ 0.05
SMCR2-201ENST00000456090 RGS19P49795 217 aa15.37■□□□□ 0.05
SMCR2-201ENST00000456090 TIMM10P62072 90 aa15.37■□□□□ 0.05
SMCR2-201ENST00000456090 TFCP2Q12800 502 aa15.37■□□□□ 0.05
SMCR2-201ENST00000456090 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms