RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 SLC5A1P13866 664 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 CACNB3P54284 484 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 DGKZQ13574 1117 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 MAP3K11Q16584 847 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
PDGFB-204ENST00000455790 TBC1D22AQ8WUA7 517 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 LPIN2Q92539 896 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 OTOFQ9HC10 1997 aa14.89□□□□□ -0.03
PDGFB-204ENST00000455790 TCP10L2B9ZVM9 353 aa14.89□□□□□ -0.03
PDGFB-204ENST00000455790 HNRNPUQ00839 825 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDGFB-204ENST00000455790 ATP2B3Q16720 1220 aa14.89□□□□□ -0.03
PDGFB-204ENST00000455790 SPRYD7Q5W111 196 aa14.89□□□□□ -0.03
PDGFB-204ENST00000455790 TEPSINQ96N21 525 aa14.89□□□□□ -0.03
PDGFB-204ENST00000455790 TBC1D8O95759 1140 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 ADORA1P30542 326 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 SUPT20HL1Q3ZLR7 823 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 REM2Q8IYK8 340 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-204ENST00000455790 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-204ENST00000455790 TEKT1Q969V4 418 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 CLUAP1Q96AJ1 413 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 TMEM39BQ9GZU3 492 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 CEP126Q9P2H0 1117 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 FBXO3Q9UK99 471 aa14.88□□□□□ -0.03
PDGFB-204ENST00000455790 CCDC85CA6NKD9 419 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-204ENST00000455790 USP2O75604 605 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-204ENST00000455790 GJA5P36382 358 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 PHKA1P46020 1223 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 TM4SF4P48230 202 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 HDLBPQ00341 1268 aaKnown RBP14.87□□□□□ -0.03
PDGFB-204ENST00000455790 TNFAIP1Q13829 316 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 APOBEC3HQ6NTF7 200 aaKnown RBP14.87□□□□□ -0.03
PDGFB-204ENST00000455790 ATF7IPQ6VMQ6 1270 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 WNK4Q96J92 1243 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 COPRSQ9NQ92 184 aa14.87□□□□□ -0.03
PDGFB-204ENST00000455790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-204ENST00000455790 MYH13Q9UKX3 1938 aa14.86□□□□□ -0.03
PDGFB-204ENST00000455790 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
PDGFB-204ENST00000455790 GNAI3P08754 354 aa14.86□□□□□ -0.03
PDGFB-204ENST00000455790 PRDX5P30044 214 aa14.86□□□□□ -0.03
PDGFB-204ENST00000455790 IL15P40933 162 aaPredicted RBP14.86□□□□□ -0.03
PDGFB-204ENST00000455790 SLC10A4Q96EP9 437 aa14.86□□□□□ -0.03
PDGFB-204ENST00000455790 ZDHHC15Q96MV8 337 aa14.86□□□□□ -0.03
PDGFB-204ENST00000455790 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
PDGFB-204ENST00000455790 IREB2P48200 963 aaKnown RBP14.85□□□□□ -0.03
PDGFB-204ENST00000455790 SREBF2Q12772 1141 aa14.85□□□□□ -0.03
PDGFB-204ENST00000455790 MTX1Q13505 466 aa14.85□□□□□ -0.03
PDGFB-204ENST00000455790 DIXDC1Q155Q3 683 aa14.85□□□□□ -0.03
PDGFB-204ENST00000455790 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
PDGFB-204ENST00000455790 LAMB1P07942 1786 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 IPO8O15397 1037 aaKnown RBP14.84□□□□□ -0.03
PDGFB-204ENST00000455790 TMEM57Q8N5G2 664 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 WDR66Q8TBY9 1149 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 ZNF296Q8WUU4 475 aaPredicted RBP14.84□□□□□ -0.03
PDGFB-204ENST00000455790 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 ELP3Q9H9T3 547 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 HDAC5Q9UQL6 1122 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 DAGLAQ9Y4D2 1042 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 HTTP42858 3142 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 MAST3O60307 1309 aa14.84□□□□□ -0.03
PDGFB-204ENST00000455790 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
PDGFB-204ENST00000455790 IGF2BP3O00425 579 aaKnown RBP eCLIP14.83□□□□□ -0.04
PDGFB-204ENST00000455790 ZBTB48P10074 688 aaPredicted RBP14.83□□□□□ -0.04
PDGFB-204ENST00000455790 TFCP2Q12800 502 aa14.83□□□□□ -0.04
PDGFB-204ENST00000455790 CCDC102BQ68D86 513 aa14.83□□□□□ -0.04
PDGFB-204ENST00000455790 HHIPL2Q6UWX4 724 aa14.83□□□□□ -0.04
PDGFB-204ENST00000455790 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.83□□□□□ -0.04
PDGFB-204ENST00000455790 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.04
PDGFB-204ENST00000455790 MRIQ9BWK5 157 aa14.83□□□□□ -0.04
PDGFB-204ENST00000455790 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
PDGFB-204ENST00000455790 GPR25O00155 361 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 GNAI2P04899 355 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 TNNI2P48788 182 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 TIMM10P62072 90 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 RASGRF1Q13972 1273 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 VGLL4Q14135 290 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 ZKSCAN2Q63HK3 967 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 CTU1Q7Z7A3 348 aaKnown RBP14.82□□□□□ -0.04
PDGFB-204ENST00000455790 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
PDGFB-204ENST00000455790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.82□□□□□ -0.04
PDGFB-204ENST00000455790 GNL3LQ9NVN8 582 aaKnown RBP14.82□□□□□ -0.04
PDGFB-204ENST00000455790 A0A1B0GUL7 405 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 UNCXA6NJT0 531 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 RLBP1P12271 317 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 OPTNQ96CV9 577 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 CFHR5Q9BXR6 569 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 DENND2AQ9ULE3 1009 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 SALL1Q9NSC2 1324 aa14.81□□□□□ -0.04
PDGFB-204ENST00000455790 SEMA3EO15041 775 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 LDHBP07195 334 aaKnown RBP14.8□□□□□ -0.04
PDGFB-204ENST00000455790 NFIAQ12857 509 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 CDC42EP5Q6NZY7 148 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 FAM83AQ86UY5 434 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 XAGE2Q96GT9 111 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 PTPN18Q99952 460 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 C1orf115Q9H7X2 142 aa14.8□□□□□ -0.04
PDGFB-204ENST00000455790 RPAP1Q9BWH6 1393 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms