RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 OPTNQ96CV9 577 aa23.64■■□□□ 1.37
MSH6-206ENST00000455383 SUCLG2Q96I99 432 aa23.64■■□□□ 1.37
MSH6-206ENST00000455383 UTYO14607 1347 aa23.63■■□□□ 1.37
MSH6-206ENST00000455383 CRKP46108 304 aa23.63■■□□□ 1.37
MSH6-206ENST00000455383 SP3Q02447 781 aa23.63■■□□□ 1.37
MSH6-206ENST00000455383 SRCIN1Q9C0H9 1055 aa23.63■■□□□ 1.37
MSH6-206ENST00000455383 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
MSH6-206ENST00000455383 RBBP6Q7Z6E9 1792 aaKnown RBP23.63■■□□□ 1.37
MSH6-206ENST00000455383 FBXO33Q7Z6M2 555 aa23.62■■□□□ 1.37
MSH6-206ENST00000455383 EFCC1Q9HA90 598 aa23.62■■□□□ 1.37
MSH6-206ENST00000455383 MROH5Q6ZUA9 1318 aa23.61■■□□□ 1.37
MSH6-206ENST00000455383 MKI67P46013 3256 aaKnown RBP23.61■■□□□ 1.37
MSH6-206ENST00000455383 RABL6Q3YEC7 729 aaPredicted RBP23.61■■□□□ 1.37
MSH6-206ENST00000455383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.61■■□□□ 1.37
MSH6-206ENST00000455383 BRI3BPQ8WY22 251 aa23.61■■□□□ 1.37
MSH6-206ENST00000455383 NBPF7P0C2Y1 421 aaPredicted RBP23.6■■□□□ 1.37
MSH6-206ENST00000455383 MAP3K9P80192 1104 aa23.6■■□□□ 1.37
MSH6-206ENST00000455383 HDLBPQ00341 1268 aaKnown RBP23.6■■□□□ 1.37
MSH6-206ENST00000455383 GRIK5Q16478 980 aa23.6■■□□□ 1.37
MSH6-206ENST00000455383 SLC4A10Q6U841 1118 aa23.6■■□□□ 1.37
MSH6-206ENST00000455383 CNKSR2Q8WXI2 1034 aa23.6■■□□□ 1.37
MSH6-206ENST00000455383 TMEM39BQ9GZU3 492 aa23.6■■□□□ 1.37
MSH6-206ENST00000455383 CENPFP49454 3210 aa23.59■■□□□ 1.37
MSH6-206ENST00000455383 TCP10L2B9ZVM9 353 aa23.59■■□□□ 1.37
MSH6-206ENST00000455383 TNNI2P48788 182 aa23.59■■□□□ 1.37
MSH6-206ENST00000455383 VGLL4Q14135 290 aa23.59■■□□□ 1.37
MSH6-206ENST00000455383 GCC1Q96CN9 775 aa23.59■■□□□ 1.37
MSH6-206ENST00000455383 GTF2A2P52657 109 aa23.57■■□□□ 1.36
MSH6-206ENST00000455383 VGLL2Q8N8G2 317 aa23.57■■□□□ 1.36
MSH6-206ENST00000455383 MRIQ9BWK5 157 aa23.57■■□□□ 1.36
MSH6-206ENST00000455383 CCL15-CCL14A0A0B4J2E2 113 aa23.56■■□□□ 1.36
MSH6-206ENST00000455383 CCL15Q16663 113 aa23.56■■□□□ 1.36
MSH6-206ENST00000455383 ANKRD44Q8N8A2 993 aa23.56■■□□□ 1.36
MSH6-206ENST00000455383 TBC1D22AQ8WUA7 517 aa23.56■■□□□ 1.36
MSH6-206ENST00000455383 BICC1Q9H694 974 aaKnown RBP23.56■■□□□ 1.36
MSH6-206ENST00000455383 ZFYVE28Q9HCC9 887 aa23.56■■□□□ 1.36
MSH6-206ENST00000455383 KIAA0100Q14667 2235 aaKnown RBP23.56■■□□□ 1.36
MSH6-206ENST00000455383 BRCA2P51587 3418 aa23.56■■□□□ 1.36
MSH6-206ENST00000455383 SPDYE5A6NIY4 337 aa23.55■■□□□ 1.36
MSH6-206ENST00000455383 TAF1CQ15572 869 aaPredicted RBP23.55■■□□□ 1.36
MSH6-206ENST00000455383 LRRC24Q50LG9 513 aa23.55■■□□□ 1.36
MSH6-206ENST00000455383 FAM43AQ8N2R8 423 aa23.55■■□□□ 1.36
MSH6-206ENST00000455383 CSADQ9Y600 493 aa23.55■■□□□ 1.36
MSH6-206ENST00000455383 PDE8BO95263 885 aa23.54■■□□□ 1.36
MSH6-206ENST00000455383 EN2P19622 333 aaPredicted RBP23.54■■□□□ 1.36
MSH6-206ENST00000455383 VPS37DQ86XT2 251 aa23.54■■□□□ 1.36
MSH6-206ENST00000455383 TEKT1Q969V4 418 aa23.54■■□□□ 1.36
MSH6-206ENST00000455383 ZNF333Q96JL9 665 aa23.54■■□□□ 1.36
MSH6-206ENST00000455383 ZDHHC15Q96MV8 337 aa23.54■■□□□ 1.36
MSH6-206ENST00000455383 IQSEC3Q9UPP2 1182 aaPredicted RBP23.54■■□□□ 1.36
MSH6-206ENST00000455383 SNCAIPQ9Y6H5 919 aa23.54■■□□□ 1.36
MSH6-206ENST00000455383 ANP32CO43423 234 aa23.53■■□□□ 1.36
MSH6-206ENST00000455383 CHAF1AQ13111 956 aaPredicted RBP23.53■■□□□ 1.36
MSH6-206ENST00000455383 CAVIN4Q5BKX8 364 aa23.53■■□□□ 1.36
MSH6-206ENST00000455383 METTL24Q5JXM2 366 aa23.53■■□□□ 1.36
MSH6-206ENST00000455383 FKBP1CQ5VVH2 108 aa23.53■■□□□ 1.36
MSH6-206ENST00000455383 FAM83AQ86UY5 434 aa23.53■■□□□ 1.36
MSH6-206ENST00000455383 OTUD5Q96G74 571 aa23.53■■□□□ 1.36
MSH6-206ENST00000455383 ARHGEF6Q15052 776 aa23.52■■□□□ 1.36
MSH6-206ENST00000455383 APOBEC3HQ6NTF7 200 aaKnown RBP23.52■■□□□ 1.36
MSH6-206ENST00000455383 ZCCHC17Q9NP64 241 aaKnown RBP23.52■■□□□ 1.36
MSH6-206ENST00000455383 SUGT1Q9Y2Z0 365 aa23.52■■□□□ 1.36
MSH6-206ENST00000455383 ZNF521Q96K83 1311 aa23.52■■□□□ 1.36
MSH6-206ENST00000455383 KIF16BQ96L93 1317 aa23.52■■□□□ 1.36
MSH6-206ENST00000455383 CACNB3P54284 484 aa23.51■■□□□ 1.35
MSH6-206ENST00000455383 HABP4Q5JVS0 413 aaKnown RBP23.51■■□□□ 1.35
MSH6-206ENST00000455383 ERO1BQ86YB8 467 aa23.51■■□□□ 1.35
MSH6-206ENST00000455383 PTCH2Q9Y6C5 1203 aa23.51■■□□□ 1.35
MSH6-206ENST00000455383 CETPP11597 493 aa23.5■■□□□ 1.35
MSH6-206ENST00000455383 FGFR2P21802 821 aa23.5■■□□□ 1.35
MSH6-206ENST00000455383 BCAMP50895 628 aa23.5■■□□□ 1.35
MSH6-206ENST00000455383 MRPL50Q8N5N7 158 aaKnown RBP23.5■■□□□ 1.35
MSH6-206ENST00000455383 RPAP1Q9BWH6 1393 aaPredicted RBP23.5■■□□□ 1.35
MSH6-206ENST00000455383 TLR2O60603 784 aa23.49■■□□□ 1.35
MSH6-206ENST00000455383 FRAT2O75474 233 aaPredicted RBP23.49■■□□□ 1.35
MSH6-206ENST00000455383 HHIPL2Q6UWX4 724 aa23.49■■□□□ 1.35
MSH6-206ENST00000455383 TMEM106CQ9BVX2 250 aa23.49■■□□□ 1.35
MSH6-206ENST00000455383 MAST3O60307 1309 aa23.49■■□□□ 1.35
MSH6-206ENST00000455383 BTBD19C9JJ37 291 aa23.48■■□□□ 1.35
MSH6-206ENST00000455383 PPIL2Q13356 520 aa23.48■■□□□ 1.35
MSH6-206ENST00000455383 NBPF11Q86T75 865 aa23.48■■□□□ 1.35
MSH6-206ENST00000455383 ZKSCAN4Q969J2 545 aaPredicted RBP23.48■■□□□ 1.35
MSH6-206ENST00000455383 HOOK2Q96ED9 719 aa23.48■■□□□ 1.35
MSH6-206ENST00000455383 WRNIP1Q96S55 665 aa23.48■■□□□ 1.35
MSH6-206ENST00000455383 TMOD2Q9NZR1 351 aa23.48■■□□□ 1.35
MSH6-206ENST00000455383 IRF6O14896 467 aa23.47■■□□□ 1.35
MSH6-206ENST00000455383 SLC9C1Q4G0N8 1177 aa23.47■■□□□ 1.35
MSH6-206ENST00000455383 KLHDC4Q8TBB5 520 aa23.47■■□□□ 1.35
MSH6-206ENST00000455383 USP44Q9H0E7 712 aa23.47■■□□□ 1.35
MSH6-206ENST00000455383 PTPRCP08575 1304 aa23.47■■□□□ 1.35
MSH6-206ENST00000455383 LACTBP83111 547 aaPredicted RBP23.46■■□□□ 1.35
MSH6-206ENST00000455383 SNAPC2Q13487 334 aa23.46■■□□□ 1.35
MSH6-206ENST00000455383 PUM3Q15397 648 aaKnown RBP23.46■■□□□ 1.35
MSH6-206ENST00000455383 WDHD1O75717 1129 aaPredicted RBP23.45■■□□□ 1.34
MSH6-206ENST00000455383 RFX5P48382 616 aaPredicted RBP23.45■■□□□ 1.34
MSH6-206ENST00000455383 DCAF15Q66K64 600 aa23.45■■□□□ 1.34
MSH6-206ENST00000455383 ARHGAP39Q9C0H5 1083 aa23.45■■□□□ 1.34
MSH6-206ENST00000455383 GNRH1P01148 92 aa23.44■■□□□ 1.34
MSH6-206ENST00000455383 IFIT1P09914 478 aaKnown RBP23.44■■□□□ 1.34
MSH6-206ENST00000455383 PPATQ06203 517 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms