RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 RNF181Q9P0P0 153 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 MYO3BQ8WXR4 1341 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 TCRBV5S4A2TA0A5A2 114 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 CHGBP05060 677 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 EIF6P56537 245 aaKnown RBP20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 TNIP1Q15025 636 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 C9orf131Q5VYM1 1079 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 MECOMQ03112 1051 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 C8orf34Q49A92 452 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 MAGEB6Q8N7X4 407 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 GMLQ99445 158 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 DIAPH3Q9NSV4 1193 aa20.04■□□□□ 0.8
CCDC90B-202ENST00000455220 ZMYM1Q5SVZ6 1142 aa20.03■□□□□ 0.8
CCDC90B-202ENST00000455220 DZIP1Q86YF9 867 aaKnown RBP20.03■□□□□ 0.8
CCDC90B-202ENST00000455220 AGBL3Q8NEM8 1001 aa20.03■□□□□ 0.8
CCDC90B-202ENST00000455220 ZNF541Q9H0D2 1346 aa20.03■□□□□ 0.8
CCDC90B-202ENST00000455220 ZNF532Q9HCE3 1301 aa20.03■□□□□ 0.8
CCDC90B-202ENST00000455220 MAST3O60307 1309 aa20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 ZC3H4Q9UPT8 1303 aaKnown RBP20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 NMIQ13287 307 aaPredicted RBP20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 SLFNL1Q499Z3 407 aa20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 NAA16Q6N069 864 aaPredicted RBP20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 CASC1Q6TDU7 716 aa20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 APPBP2Q92624 585 aa20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 FAM227BQ96M60 508 aa20.02■□□□□ 0.8
CCDC90B-202ENST00000455220 A0A0D9SFI3 127 aa20.01■□□□□ 0.79
CCDC90B-202ENST00000455220 MYH2Q9UKX2 1941 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 RAD50Q92878 1312 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 GSTO1P78417 241 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 CWC27Q6UX04 472 aaKnown RBP20■□□□□ 0.79
CCDC90B-202ENST00000455220 OSBP2Q969R2 916 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 FAM163AQ96GL9 167 aaPredicted RBP20■□□□□ 0.79
CCDC90B-202ENST00000455220 MRIQ9BWK5 157 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 HELLSQ9NRZ9 838 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 TTF2Q9UNY4 1162 aaKnown RBP20■□□□□ 0.79
CCDC90B-202ENST00000455220 CYP7A1P22680 504 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 RPS12P25398 132 aaKnown RBP20■□□□□ 0.79
CCDC90B-202ENST00000455220 ADGRA1Q86SQ6 560 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 KIAA0825Q8IV33 1275 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 RUFY2Q8WXA3 655 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 ESYT1Q9BSJ8 1104 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 IL25Q9H293 177 aa20■□□□□ 0.79
CCDC90B-202ENST00000455220 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
CCDC90B-202ENST00000455220 GAKO14976 1311 aa19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 SGSM2O43147 1006 aa19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 HDLBPQ00341 1268 aaKnown RBP19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 DIXDC1Q155Q3 683 aa19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 MCMDC2Q4G0Z9 681 aa19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 SLF2Q8IX21 1173 aa19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 GPC2Q8N158 579 aa19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 PUS7LQ9H0K6 701 aaKnown RBP19.99■□□□□ 0.79
CCDC90B-202ENST00000455220 MROH7-TTC4A0A0A0MT08 1334 aa19.98■□□□□ 0.79
CCDC90B-202ENST00000455220 F8W031 263 aaPredicted RBP19.98■□□□□ 0.79
CCDC90B-202ENST00000455220 LDHCP07864 332 aa19.98■□□□□ 0.79
CCDC90B-202ENST00000455220 HHIPL2Q6UWX4 724 aa19.98■□□□□ 0.79
CCDC90B-202ENST00000455220 SEC62Q99442 399 aaKnown RBP19.98■□□□□ 0.79
CCDC90B-202ENST00000455220 DCAF8L1A6NGE4 600 aa19.97■□□□□ 0.79
CCDC90B-202ENST00000455220 MMP14P50281 582 aa19.97■□□□□ 0.79
CCDC90B-202ENST00000455220 DPF2Q92785 391 aa19.97■□□□□ 0.79
CCDC90B-202ENST00000455220 SERPINA10Q9UK55 444 aa19.97■□□□□ 0.79
CCDC90B-202ENST00000455220 M0R2C6 588 aa19.96■□□□□ 0.79
CCDC90B-202ENST00000455220 GJA3Q9Y6H8 435 aa19.96■□□□□ 0.79
CCDC90B-202ENST00000455220 ADAMTSL1Q8N6G6 1762 aa19.96■□□□□ 0.79
CCDC90B-202ENST00000455220 USP17L8P0C7I0 530 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 GMPSP49915 693 aaPredicted RBP19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 SCNN1DP51172 638 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 ZNF589Q86UQ0 364 aaPredicted RBP19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 TEKT1Q969V4 418 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 RIOK1Q9BRS2 568 aaKnown RBP19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 BACH2Q9BYV9 841 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 DAGLAQ9Y4D2 1042 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 GPR75-ASB3A0A0A6YYF3 556 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 CRKP46108 304 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 PPP4CP60510 307 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 ZDHHC15Q96MV8 337 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 HDAC9Q9UKV0 1011 aa19.95■□□□□ 0.78
CCDC90B-202ENST00000455220 CCDC171Q6TFL3 1326 aa19.94■□□□□ 0.78
CCDC90B-202ENST00000455220 GPAA1O43292 621 aa19.94■□□□□ 0.78
CCDC90B-202ENST00000455220 ZNF280AP59817 542 aaPredicted RBP19.94■□□□□ 0.78
CCDC90B-202ENST00000455220 CCDC129Q6ZRS4 1044 aa19.94■□□□□ 0.78
CCDC90B-202ENST00000455220 OGFOD1Q8N543 542 aa19.94■□□□□ 0.78
CCDC90B-202ENST00000455220 MIGA1Q8NAN2 632 aa19.94■□□□□ 0.78
CCDC90B-202ENST00000455220 AIDAQ96BJ3 306 aa19.94■□□□□ 0.78
CCDC90B-202ENST00000455220 MAGEB6P1A0A0J9YX57 407 aa19.93■□□□□ 0.78
CCDC90B-202ENST00000455220 EIF5BO60841 1220 aaKnown RBP19.93■□□□□ 0.78
CCDC90B-202ENST00000455220 MBD4O95243 580 aa19.93■□□□□ 0.78
CCDC90B-202ENST00000455220 MFAP1P55081 439 aaKnown RBP19.93■□□□□ 0.78
CCDC90B-202ENST00000455220 CERS3Q8IU89 383 aa19.93■□□□□ 0.78
CCDC90B-202ENST00000455220 LCORLQ8N3X6 602 aa19.93■□□□□ 0.78
CCDC90B-202ENST00000455220 STRBPQ96SI9 672 aaKnown RBP19.93■□□□□ 0.78
CCDC90B-202ENST00000455220 DDNO94850 711 aaPredicted RBP19.92■□□□□ 0.78
CCDC90B-202ENST00000455220 BAG3O95817 575 aa19.92■□□□□ 0.78
CCDC90B-202ENST00000455220 BTDP43251 543 aa19.92■□□□□ 0.78
CCDC90B-202ENST00000455220 APOBEC3HQ6NTF7 200 aaKnown RBP19.92■□□□□ 0.78
CCDC90B-202ENST00000455220 MTMR14Q8NCE2 650 aa19.92■□□□□ 0.78
CCDC90B-202ENST00000455220 AATFQ9NY61 560 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCDC90B-202ENST00000455220 SEC24BO95487 1268 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 DYNLL1P63167 89 aaKnown RBP19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 CFAP100Q494V2 611 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 DPY19L2Q6NUT2 758 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms