RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
HDAC9-217ENST00000455069 SULF1Q8IWU6 871 aa13.97□□□□□ -0.17
HDAC9-217ENST00000455069 TBC1D22AQ8WUA7 517 aa13.97□□□□□ -0.17
HDAC9-217ENST00000455069 PRMT6Q96LA8 375 aaPredicted RBP13.97□□□□□ -0.17
HDAC9-217ENST00000455069 ZNF408Q9H9D4 720 aa13.97□□□□□ -0.17
HDAC9-217ENST00000455069 ABT1Q9ULW3 272 aaKnown RBP13.97□□□□□ -0.17
HDAC9-217ENST00000455069 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
HDAC9-217ENST00000455069 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
HDAC9-217ENST00000455069 CAPN15O75808 1086 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 PRDX5P30044 214 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 CRKP46108 304 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 OS9Q13438 667 aaPredicted RBP13.96□□□□□ -0.17
HDAC9-217ENST00000455069 RPAP2Q8IXW5 612 aaPredicted RBP13.96□□□□□ -0.17
HDAC9-217ENST00000455069 CDCA5Q96FF9 252 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 DBNDD2Q9BQY9 259 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 GPR108Q9NPR9 543 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 TLL2Q9Y6L7 1015 aa13.96□□□□□ -0.17
HDAC9-217ENST00000455069 MAST2Q6P0Q8 1798 aa13.96□□□□□ -0.18
HDAC9-217ENST00000455069 SALL1Q9NSC2 1324 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 CLRN2A0PK11 232 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 SEMA3EO15041 775 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
HDAC9-217ENST00000455069 PRAMEF18Q5VWM3 479 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 WDR66Q8TBY9 1149 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 AIDAQ96BJ3 306 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 TLR7Q9NYK1 1049 aaKnown RBP13.95□□□□□ -0.18
HDAC9-217ENST00000455069 SERPINA10Q9UK55 444 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
HDAC9-217ENST00000455069 SSC5DA1L4H1 1573 aa13.95□□□□□ -0.18
HDAC9-217ENST00000455069 DOCK2Q92608 1830 aa13.94□□□□□ -0.18
HDAC9-217ENST00000455069 OTOFQ9HC10 1997 aa13.94□□□□□ -0.18
HDAC9-217ENST00000455069 PDS5AQ29RF7 1337 aaKnown RBP13.94□□□□□ -0.18
HDAC9-217ENST00000455069 ARID4AP29374 1257 aaPredicted RBP13.94□□□□□ -0.18
HDAC9-217ENST00000455069 SAPCD2Q86UD0 394 aa13.94□□□□□ -0.18
HDAC9-217ENST00000455069 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
HDAC9-217ENST00000455069 GNL3LQ9NVN8 582 aaKnown RBP13.94□□□□□ -0.18
HDAC9-217ENST00000455069 DBNLQ9UJU6 430 aaKnown RBP13.94□□□□□ -0.18
HDAC9-217ENST00000455069 DENND2AQ9ULE3 1009 aa13.94□□□□□ -0.18
HDAC9-217ENST00000455069 SUGT1Q9Y2Z0 365 aa13.94□□□□□ -0.18
HDAC9-217ENST00000455069 MCAMP43121 646 aa13.93□□□□□ -0.18
HDAC9-217ENST00000455069 RBM5P52756 815 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC9-217ENST00000455069 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
HDAC9-217ENST00000455069 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
HDAC9-217ENST00000455069 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
HDAC9-217ENST00000455069 APOBEC3FQ8IUX4 373 aaKnown RBP13.93□□□□□ -0.18
HDAC9-217ENST00000455069 CAPNS2Q96L46 248 aa13.93□□□□□ -0.18
HDAC9-217ENST00000455069 CHMP4BQ9H444 224 aaKnown RBP13.93□□□□□ -0.18
HDAC9-217ENST00000455069 TDRD3Q9H7E2 651 aaKnown RBP13.93□□□□□ -0.18
HDAC9-217ENST00000455069 HMG20BQ9P0W2 317 aa13.93□□□□□ -0.18
HDAC9-217ENST00000455069 MAST3O60307 1309 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 HMMRO75330 724 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 LBX1P52954 281 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 DIXDC1Q155Q3 683 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 CYP4F22Q6NT55 531 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 TEKT1Q969V4 418 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 ZDHHC15Q96MV8 337 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 CRBNQ96SW2 442 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 CCDC8Q9H0W5 538 aaPredicted RBP13.92□□□□□ -0.18
HDAC9-217ENST00000455069 GBA2Q9HCG7 927 aaPredicted RBP13.92□□□□□ -0.18
HDAC9-217ENST00000455069 IL1RAPL2Q9NP60 686 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 ZNF70Q9UC06 446 aaPredicted RBP13.92□□□□□ -0.18
HDAC9-217ENST00000455069 CDK5RAP2Q96SN8 1893 aa13.92□□□□□ -0.18
HDAC9-217ENST00000455069 HSPA8P11142 646 aaKnown RBP13.91□□□□□ -0.18
HDAC9-217ENST00000455069 ECE1P42892 770 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 APOBEC3HQ6NTF7 200 aaKnown RBP13.91□□□□□ -0.18
HDAC9-217ENST00000455069 MOB2Q70IA6 237 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 ERC1Q8IUD2 1116 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 SPATA5Q8NB90 893 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 ZNF384Q8TF68 577 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 MRIQ9BWK5 157 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 DEFB129Q9H1M3 183 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 VEZTQ9HBM0 779 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 DAGLAQ9Y4D2 1042 aa13.91□□□□□ -0.18
HDAC9-217ENST00000455069 APBB1O00213 710 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 MYO1BO43795 1136 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 LDHBP07195 334 aaKnown RBP13.9□□□□□ -0.18
HDAC9-217ENST00000455069 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 GORABQ5T7V8 394 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 CDAN1Q8IWY9 1227 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 LAMB1P07942 1786 aa13.9□□□□□ -0.18
HDAC9-217ENST00000455069 UQCRFS1P1P0C7P4 283 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 CACNB3P54284 484 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 HUNKP57058 714 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
HDAC9-217ENST00000455069 AACSQ86V21 672 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 KIF1BPQ96EK5 621 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 HHIPL1Q96JK4 782 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
HDAC9-217ENST00000455069 SNRKQ9NRH2 765 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 ABCF2Q9UG63 623 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 FZD1Q9UP38 647 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 FOCADQ5VW36 1801 aa13.89□□□□□ -0.19
HDAC9-217ENST00000455069 GAKO14976 1311 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms