RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 WDHD1O75717 1129 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 TNNI2P48788 182 aa10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 EXOSC9Q06265 439 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 RASA3Q14644 834 aa10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 MFSD14BQ5SR56 506 aa10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 PRMT6Q96LA8 375 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 TRIM17Q9Y577 477 aa10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 MROH5Q6ZUA9 1318 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 RBBP6Q7Z6E9 1792 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 F6X3S4 739 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 ANP32CO43423 234 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 PLIN1O60240 522 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 HIBADHP31937 336 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 GSE1Q14687 1217 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 NBPF12Q5TAG4 269 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 VPS37DQ86XT2 251 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 TDRD7Q8NHU6 1098 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 TBC1D22AQ8WUA7 517 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 BBXQ8WY36 941 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 HOOK2Q96ED9 719 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 CLMNQ96JQ2 1002 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 SRCIN1Q9C0H9 1055 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 TTF2Q9UNY4 1162 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 SSC5DA1L4H1 1573 aa10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 TNRC18O15417 2968 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-209ENST00000454952 TESPA1A2RU30 521 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 SNAP23O00161 211 aa10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 IGF2BP3O00425 579 aaKnown RBP eCLIP10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 USP2O75604 605 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 HDLBPQ00341 1268 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 CCDC184Q52MB2 194 aa10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 CAVIN4Q5BKX8 364 aa10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 OTOP1Q7RTM1 612 aa10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 ZNF70Q9UC06 446 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 CSADQ9Y600 493 aa10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 OTOFQ9HC10 1997 aa10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 KIAA0100Q14667 2235 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-209ENST00000454952 MAST3O60307 1309 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 GABBR2O75899 941 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 GTF2A2P52657 109 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 SP3Q02447 781 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 CRHR2Q13324 411 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 DZIP1LQ8IYY4 767 aaKnown RBP10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 OPTNQ96CV9 577 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 ZNF594Q96JF6 807 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 R3HDMLQ9H3Y0 253 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 EFCC1Q9HA90 598 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 TMOD2Q9NZR1 351 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 PTPN22Q9Y2R2 807 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
NIF3L1-209ENST00000454952 FRAT2O75474 233 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 CRKP46108 304 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 GYG1P46976 350 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 MAP3K9P80192 1104 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 EPHA10Q5JZY3 1008 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 NBPF11Q86T75 865 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 TEKT1Q969V4 418 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 ARMC5Q96C12 935 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 FAM84BQ96KN1 310 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 MRIQ9BWK5 157 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 TDRD3Q9H7E2 651 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 ZFYVE28Q9HCC9 887 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 ZCCHC17Q9NP64 241 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 FZD1Q9UP38 647 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 JAG2Q9Y219 1238 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 PCDHAC2Q9Y5I4 1007 aa10.09□□□□□ -0.79
NIF3L1-209ENST00000454952 UTYO14607 1347 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 KIF16BQ96L93 1317 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 METTL24Q5JXM2 366 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 FKBP1CQ5VVH2 108 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 FBXO33Q7Z6M2 555 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 CD99L2Q8TCZ2 262 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 TMEM106CQ9BVX2 250 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 ELP3Q9H9T3 547 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 RIPOR2Q9Y4F9 1068 aa10.08□□□□□ -0.8
NIF3L1-209ENST00000454952 PTPRCP08575 1304 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 MYH13Q9UKX3 1938 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 CCL15-CCL14A0A0B4J2E2 113 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 TCP10L2B9ZVM9 353 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 PDE8BO95263 885 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 GNRH1P01148 92 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 CETPP11597 493 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 GJA5P36382 358 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 VGLL4Q14135 290 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 KIF22Q14807 665 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 TAF1CQ15572 869 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 CCL15Q16663 113 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 RABL6Q3YEC7 729 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 DCAF15Q66K64 600 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 FAM83AQ86UY5 434 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 SUCLG2Q96I99 432 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms