RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 GORABQ5T7V8 394 aa30.71■■■□□ 2.51
MSH2-203ENST00000454849 ZNF70Q9UC06 446 aaPredicted RBP30.71■■■□□ 2.51
MSH2-203ENST00000454849 DDX19BQ9UMR2 479 aa30.71■■■□□ 2.51
MSH2-203ENST00000454849 FZD1Q9UP38 647 aa30.71■■■□□ 2.51
MSH2-203ENST00000454849 UBE2Q2LH0YL09 131 aa30.7■■■□□ 2.51
MSH2-203ENST00000454849 RASGRF1Q13972 1273 aa30.7■■■□□ 2.51
MSH2-203ENST00000454849 ZBTB40Q9NUA8 1239 aa30.7■■■□□ 2.51
MSH2-203ENST00000454849 DENND2AQ9ULE3 1009 aa30.7■■■□□ 2.51
MSH2-203ENST00000454849 PRDX5P30044 214 aa30.69■■■□□ 2.5
MSH2-203ENST00000454849 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.69■■■□□ 2.5
MSH2-203ENST00000454849 TEKT1Q969V4 418 aa30.69■■■□□ 2.5
MSH2-203ENST00000454849 EXOC6BQ9Y2D4 811 aa30.69■■■□□ 2.5
MSH2-203ENST00000454849 CACNB3P54284 484 aa30.68■■■□□ 2.5
MSH2-203ENST00000454849 ZIC5Q96T25 663 aa30.68■■■□□ 2.5
MSH2-203ENST00000454849 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.68■■■□□ 2.5
MSH2-203ENST00000454849 NOP58Q9Y2X3 529 aaKnown RBP30.68■■■□□ 2.5
MSH2-203ENST00000454849 TCP10L2B9ZVM9 353 aa30.67■■■□□ 2.5
MSH2-203ENST00000454849 DIXDC1Q155Q3 683 aa30.67■■■□□ 2.5
MSH2-203ENST00000454849 SPDYE2Q495Y8 402 aa30.67■■■□□ 2.5
MSH2-203ENST00000454849 RGMBQ6NW40 437 aa30.67■■■□□ 2.5
MSH2-203ENST00000454849 PI16Q6UXB8 463 aa30.67■■■□□ 2.5
MSH2-203ENST00000454849 ARAP2Q8WZ64 1704 aa30.67■■■□□ 2.5
MSH2-203ENST00000454849 ZNF157P51786 506 aaPredicted RBP30.66■■■□□ 2.5
MSH2-203ENST00000454849 TNNI3KQ59H18 835 aa30.66■■■□□ 2.5
MSH2-203ENST00000454849 HHIPL1Q96JK4 782 aa30.66■■■□□ 2.5
MSH2-203ENST00000454849 BCL11AQ9H165 835 aa30.66■■■□□ 2.5
MSH2-203ENST00000454849 FPGT-TNNI3KV9GXZ4 949 aa30.66■■■□□ 2.5
MSH2-203ENST00000454849 MYH13Q9UKX3 1938 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 APBB1O00213 710 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 SEMA3EO15041 775 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 LDHBP07195 334 aaKnown RBP30.65■■■□□ 2.5
MSH2-203ENST00000454849 NF2P35240 595 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 PDE3AQ14432 1141 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 RASA3Q14644 834 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 SIRT2Q8IXJ6 389 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 DBNDD2Q9BQY9 259 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 ABCF2Q9UG63 623 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 SUGT1Q9Y2Z0 365 aa30.65■■■□□ 2.5
MSH2-203ENST00000454849 HDLBPQ00341 1268 aaKnown RBP30.64■■■□□ 2.5
MSH2-203ENST00000454849 NBPF12Q5TAG4 269 aaPredicted RBP30.64■■■□□ 2.5
MSH2-203ENST00000454849 FOXN1O15353 648 aa30.63■■■□□ 2.49
MSH2-203ENST00000454849 APOBEC3HQ6NTF7 200 aaKnown RBP30.63■■■□□ 2.49
MSH2-203ENST00000454849 CDAN1Q8IWY9 1227 aa30.63■■■□□ 2.49
MSH2-203ENST00000454849 ZDHHC15Q96MV8 337 aa30.63■■■□□ 2.49
MSH2-203ENST00000454849 CCDC8Q9H0W5 538 aaPredicted RBP30.63■■■□□ 2.49
MSH2-203ENST00000454849 WBP1LQ9NX94 342 aa30.63■■■□□ 2.49
MSH2-203ENST00000454849 HMG20BQ9P0W2 317 aa30.63■■■□□ 2.49
MSH2-203ENST00000454849 TBC1D9Q6ZT07 1266 aa30.62■■■□□ 2.49
MSH2-203ENST00000454849 TLR7Q9NYK1 1049 aaKnown RBP30.62■■■□□ 2.49
MSH2-203ENST00000454849 MAST3O60307 1309 aa30.62■■■□□ 2.49
MSH2-203ENST00000454849 FAM155AB1AL88 458 aaPredicted RBP30.61■■■□□ 2.49
MSH2-203ENST00000454849 SNRKQ9NRH2 765 aa30.61■■■□□ 2.49
MSH2-203ENST00000454849 HHIPL2Q6UWX4 724 aa30.6■■■□□ 2.49
MSH2-203ENST00000454849 SPATA5Q8NB90 893 aa30.6■■■□□ 2.49
MSH2-203ENST00000454849 AIDAQ96BJ3 306 aa30.6■■■□□ 2.49
MSH2-203ENST00000454849 MRIQ9BWK5 157 aa30.6■■■□□ 2.49
MSH2-203ENST00000454849 TMEM39BQ9GZU3 492 aa30.6■■■□□ 2.49
MSH2-203ENST00000454849 GPR108Q9NPR9 543 aa30.6■■■□□ 2.49
MSH2-203ENST00000454849 ANGEL1Q9UNK9 670 aaKnown RBP30.6■■■□□ 2.49
MSH2-203ENST00000454849 DAGLAQ9Y4D2 1042 aa30.6■■■□□ 2.49
MSH2-203ENST00000454849 ECM29Q5VYK3 1845 aa30.59■■■□□ 2.49
MSH2-203ENST00000454849 SALL1Q9NSC2 1324 aa30.59■■■□□ 2.49
MSH2-203ENST00000454849 FKBP1BP68106 108 aa30.59■■■□□ 2.49
MSH2-203ENST00000454849 RPAP2Q8IXW5 612 aaPredicted RBP30.59■■■□□ 2.49
MSH2-203ENST00000454849 EAF2Q96CJ1 260 aaPredicted RBP30.59■■■□□ 2.49
MSH2-203ENST00000454849 MAP2K2P36507 400 aa30.58■■■□□ 2.49
MSH2-203ENST00000454849 MCAMP43121 646 aa30.58■■■□□ 2.49
MSH2-203ENST00000454849 MAP2K1Q02750 393 aaPredicted RBP30.58■■■□□ 2.49
MSH2-203ENST00000454849 TTC39AQ5SRH9 613 aa30.58■■■□□ 2.49
MSH2-203ENST00000454849 IL1RAPL2Q9NP60 686 aa30.58■■■□□ 2.49
MSH2-203ENST00000454849 PPP2R3BQ9Y5P8 575 aa30.58■■■□□ 2.49
MSH2-203ENST00000454849 PAPPA2Q9BXP8 1791 aa30.58■■■□□ 2.49
MSH2-203ENST00000454849 ARID4AP29374 1257 aaPredicted RBP30.57■■■□□ 2.48
MSH2-203ENST00000454849 ARMC9Q7Z3E5 817 aa30.57■■■□□ 2.48
MSH2-203ENST00000454849 CCDC102AQ96A19 550 aa30.57■■■□□ 2.48
MSH2-203ENST00000454849 DBNLQ9UJU6 430 aaKnown RBP30.57■■■□□ 2.48
MSH2-203ENST00000454849 SSC5DA1L4H1 1573 aa30.57■■■□□ 2.48
MSH2-203ENST00000454849 KIF23Q02241 960 aaPredicted RBP30.56■■■□□ 2.48
MSH2-203ENST00000454849 MKRN3Q13064 507 aaKnown RBP30.56■■■□□ 2.48
MSH2-203ENST00000454849 NOGQ13253 232 aa30.56■■■□□ 2.48
MSH2-203ENST00000454849 TNFAIP1Q13829 316 aa30.56■■■□□ 2.48
MSH2-203ENST00000454849 SUPT20HL1Q3ZLR7 823 aa30.56■■■□□ 2.48
MSH2-203ENST00000454849 DZIP1Q86YF9 867 aaKnown RBP30.56■■■□□ 2.48
MSH2-203ENST00000454849 RASAL3Q86YV0 1011 aa30.56■■■□□ 2.48
MSH2-203ENST00000454849 CHMP4BQ9H444 224 aaKnown RBP30.56■■■□□ 2.48
MSH2-203ENST00000454849 TSKSQ9UJT2 592 aa30.56■■■□□ 2.48
MSH2-203ENST00000454849 SLC10A3P09131 477 aa30.55■■■□□ 2.48
MSH2-203ENST00000454849 UQCRFS1P1P0C7P4 283 aa30.55■■■□□ 2.48
MSH2-203ENST00000454849 CCDC158Q5M9N0 1113 aa30.55■■■□□ 2.48
MSH2-203ENST00000454849 COL13A1Q5TAT6 717 aaPredicted RBP30.55■■■□□ 2.48
MSH2-203ENST00000454849 CDC42EP5Q6NZY7 148 aa30.55■■■□□ 2.48
MSH2-203ENST00000454849 ZGPATQ8N5A5 531 aaKnown RBP30.55■■■□□ 2.48
MSH2-203ENST00000454849 TEPSINQ96N21 525 aa30.55■■■□□ 2.48
MSH2-203ENST00000454849 TMOD2Q9NZR1 351 aa30.55■■■□□ 2.48
MSH2-203ENST00000454849 HMMRO75330 724 aa30.54■■■□□ 2.48
MSH2-203ENST00000454849 RRP1P56182 461 aaKnown RBP30.54■■■□□ 2.48
MSH2-203ENST00000454849 ERICH6Q7L0X2 663 aa30.54■■■□□ 2.48
MSH2-203ENST00000454849 AACSQ86V21 672 aa30.54■■■□□ 2.48
MSH2-203ENST00000454849 USP40Q9NVE5 1235 aa30.54■■■□□ 2.48
MSH2-203ENST00000454849 PDS5AQ29RF7 1337 aaKnown RBP30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms