RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SULF1Q8IWU6 871 aa17.44■□□□□ 0.38
HDAC4-205ENST00000454542 KIF1BPQ96EK5 621 aa17.44■□□□□ 0.38
HDAC4-205ENST00000454542 NEUROD6Q96NK8 337 aa17.44■□□□□ 0.38
HDAC4-205ENST00000454542 TLR7Q9NYK1 1049 aaKnown RBP17.44■□□□□ 0.38
HDAC4-205ENST00000454542 CNTNAP1P78357 1384 aa17.43■□□□□ 0.38
HDAC4-205ENST00000454542 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
HDAC4-205ENST00000454542 UQCRFS1P1P0C7P4 283 aa17.43■□□□□ 0.38
HDAC4-205ENST00000454542 MCAMP43121 646 aa17.43■□□□□ 0.38
HDAC4-205ENST00000454542 APOBEC3FQ8IUX4 373 aaKnown RBP17.43■□□□□ 0.38
HDAC4-205ENST00000454542 HMG20BQ9P0W2 317 aa17.43■□□□□ 0.38
HDAC4-205ENST00000454542 PCDHB15Q9Y5E8 787 aa17.43■□□□□ 0.38
HDAC4-205ENST00000454542 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
HDAC4-205ENST00000454542 SPDYE2Q495Y8 402 aa17.42■□□□□ 0.38
HDAC4-205ENST00000454542 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
HDAC4-205ENST00000454542 DLK2Q6UY11 383 aa17.42■□□□□ 0.38
HDAC4-205ENST00000454542 ZGPATQ8N5A5 531 aaKnown RBP17.42■□□□□ 0.38
HDAC4-205ENST00000454542 PRMT6Q96LA8 375 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-205ENST00000454542 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 AAMPQ13685 434 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 PI16Q6UXB8 463 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 CDCA5Q96FF9 252 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 ZDHHC15Q96MV8 337 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 GAKO14976 1311 aa17.41■□□□□ 0.38
HDAC4-205ENST00000454542 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
HDAC4-205ENST00000454542 CELF2O95319 508 aaKnown RBP17.4■□□□□ 0.38
HDAC4-205ENST00000454542 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
HDAC4-205ENST00000454542 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
HDAC4-205ENST00000454542 CCDC8Q9H0W5 538 aaPredicted RBP17.4■□□□□ 0.38
HDAC4-205ENST00000454542 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
HDAC4-205ENST00000454542 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
HDAC4-205ENST00000454542 PPP2R3BQ9Y5P8 575 aa17.4■□□□□ 0.38
HDAC4-205ENST00000454542 TLL2Q9Y6L7 1015 aa17.4■□□□□ 0.38
HDAC4-205ENST00000454542 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.38
HDAC4-205ENST00000454542 LDHBP07195 334 aaKnown RBP17.39■□□□□ 0.37
HDAC4-205ENST00000454542 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
HDAC4-205ENST00000454542 TTC39AQ5SRH9 613 aa17.39■□□□□ 0.37
HDAC4-205ENST00000454542 APOBEC3HQ6NTF7 200 aaKnown RBP17.39■□□□□ 0.37
HDAC4-205ENST00000454542 AACSQ86V21 672 aa17.39■□□□□ 0.37
HDAC4-205ENST00000454542 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
HDAC4-205ENST00000454542 CLRN2A0PK11 232 aa17.38■□□□□ 0.37
HDAC4-205ENST00000454542 MYO1BO43795 1136 aa17.38■□□□□ 0.37
HDAC4-205ENST00000454542 DIXDC1Q155Q3 683 aa17.38■□□□□ 0.37
HDAC4-205ENST00000454542 SAPCD2Q86UD0 394 aa17.38■□□□□ 0.37
HDAC4-205ENST00000454542 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
HDAC4-205ENST00000454542 ZNF384Q8TF68 577 aa17.38■□□□□ 0.37
HDAC4-205ENST00000454542 ZNF70Q9UC06 446 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-205ENST00000454542 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-205ENST00000454542 IGSF3O75054 1194 aa17.37■□□□□ 0.37
HDAC4-205ENST00000454542 RBM5P52756 815 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDAC4-205ENST00000454542 JMYQ8N9B5 988 aa17.37■□□□□ 0.37
HDAC4-205ENST00000454542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDAC4-205ENST00000454542 HHIPL1Q96JK4 782 aa17.37■□□□□ 0.37
HDAC4-205ENST00000454542 GBA2Q9HCG7 927 aaPredicted RBP17.37■□□□□ 0.37
HDAC4-205ENST00000454542 SCAF8Q9UPN6 1271 aaKnown RBP17.37■□□□□ 0.37
HDAC4-205ENST00000454542 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
HDAC4-205ENST00000454542 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
HDAC4-205ENST00000454542 LAMB1P07942 1786 aa17.36■□□□□ 0.37
HDAC4-205ENST00000454542 FKBP1BP68106 108 aa17.36■□□□□ 0.37
HDAC4-205ENST00000454542 FKBP1CQ5VVH2 108 aa17.36■□□□□ 0.37
HDAC4-205ENST00000454542 SPTY2D1Q68D10 685 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-205ENST00000454542 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-205ENST00000454542 LRRCC1Q9C099 1032 aa17.36■□□□□ 0.37
HDAC4-205ENST00000454542 DEFB129Q9H1M3 183 aa17.36■□□□□ 0.37
HDAC4-205ENST00000454542 TDRD3Q9H7E2 651 aaKnown RBP17.36■□□□□ 0.37
HDAC4-205ENST00000454542 CYP2E1P05181 493 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-205ENST00000454542 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-205ENST00000454542 TNFAIP1Q13829 316 aa17.35■□□□□ 0.37
HDAC4-205ENST00000454542 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
HDAC4-205ENST00000454542 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
HDAC4-205ENST00000454542 ZNF408Q9H9D4 720 aa17.35■□□□□ 0.37
HDAC4-205ENST00000454542 VEZTQ9HBM0 779 aa17.35■□□□□ 0.37
HDAC4-205ENST00000454542 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
HDAC4-205ENST00000454542 MROH7-TTC4A0A0A0MT08 1334 aa17.35■□□□□ 0.37
HDAC4-205ENST00000454542 APBB1O00213 710 aa17.34■□□□□ 0.37
HDAC4-205ENST00000454542 ZAP70P43403 619 aa17.34■□□□□ 0.37
HDAC4-205ENST00000454542 MECOMQ03112 1051 aa17.34■□□□□ 0.37
HDAC4-205ENST00000454542 FOCADQ5VW36 1801 aa17.34■□□□□ 0.37
HDAC4-205ENST00000454542 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
HDAC4-205ENST00000454542 DZIP1Q86YF9 867 aaKnown RBP17.34■□□□□ 0.37
HDAC4-205ENST00000454542 EXOC6Q8TAG9 804 aa17.34■□□□□ 0.37
HDAC4-205ENST00000454542 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
HDAC4-205ENST00000454542 ABT1Q9ULW3 272 aaKnown RBP17.34■□□□□ 0.37
HDAC4-205ENST00000454542 RASA3Q14644 834 aa17.33■□□□□ 0.36
HDAC4-205ENST00000454542 FAM83AQ86UY5 434 aa17.33■□□□□ 0.36
HDAC4-205ENST00000454542 TEPSINQ96N21 525 aa17.33■□□□□ 0.36
HDAC4-205ENST00000454542 SNRKQ9NRH2 765 aa17.33■□□□□ 0.36
HDAC4-205ENST00000454542 CDK5RAP2Q96SN8 1893 aa17.33■□□□□ 0.36
HDAC4-205ENST00000454542 IFIT2P09913 472 aaKnown RBP17.32■□□□□ 0.36
HDAC4-205ENST00000454542 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
HDAC4-205ENST00000454542 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
HDAC4-205ENST00000454542 CDC42EP5Q6NZY7 148 aa17.32■□□□□ 0.36
HDAC4-205ENST00000454542 SLF2Q8IX21 1173 aa17.32■□□□□ 0.36
HDAC4-205ENST00000454542 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
HDAC4-205ENST00000454542 GPR75-ASB3A0A0A6YYF3 556 aa17.31■□□□□ 0.36
HDAC4-205ENST00000454542 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-205ENST00000454542 VEGFBP49765 207 aa17.31■□□□□ 0.36
HDAC4-205ENST00000454542 HUNKP57058 714 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms