RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 CSRNP1Q96S65 589 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
LMCD1-205ENST00000454244 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 COL1A1P02452 1464 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-205ENST00000454244 HDLBPQ00341 1268 aaKnown RBP13.38□□□□□ -0.27
LMCD1-205ENST00000454244 PPP1R12BO60237 982 aaPredicted RBP13.37□□□□□ -0.27
LMCD1-205ENST00000454244 ADORA1P30542 326 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 PHKA1P46020 1223 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
LMCD1-205ENST00000454244 TNFAIP1Q13829 316 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 LDLRAD1Q5T700 205 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 NBPF12Q5TAG4 269 aaPredicted RBP13.37□□□□□ -0.27
LMCD1-205ENST00000454244 WDR66Q8TBY9 1149 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 TEKT1Q969V4 418 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
LMCD1-205ENST00000454244 RNF186Q9NXI6 227 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
LMCD1-205ENST00000454244 SUGT1Q9Y2Z0 365 aa13.37□□□□□ -0.27
LMCD1-205ENST00000454244 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
LMCD1-205ENST00000454244 TRPA1O75762 1119 aa13.36□□□□□ -0.27
LMCD1-205ENST00000454244 TFCP2Q12800 502 aa13.36□□□□□ -0.27
LMCD1-205ENST00000454244 FTSJ3Q8IY81 847 aaKnown RBP13.36□□□□□ -0.27
LMCD1-205ENST00000454244 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
LMCD1-205ENST00000454244 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
LMCD1-205ENST00000454244 SSC5DA1L4H1 1573 aa13.36□□□□□ -0.27
LMCD1-205ENST00000454244 MAST3O60307 1309 aa13.36□□□□□ -0.27
LMCD1-205ENST00000454244 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
LMCD1-205ENST00000454244 CACNB3P54284 484 aa13.35□□□□□ -0.27
LMCD1-205ENST00000454244 TIMM10P62072 90 aa13.35□□□□□ -0.27
LMCD1-205ENST00000454244 MAP3K11Q16584 847 aa13.35□□□□□ -0.27
LMCD1-205ENST00000454244 ZDHHC15Q96MV8 337 aa13.35□□□□□ -0.27
LMCD1-205ENST00000454244 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
LMCD1-205ENST00000454244 DENND2AQ9ULE3 1009 aa13.35□□□□□ -0.27
LMCD1-205ENST00000454244 A0A1B0GUL7 405 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 SEMA3EO15041 775 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-205ENST00000454244 RLBP1P12271 317 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 PRDX5P30044 214 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 TNNI2P48788 182 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 SPRYD7Q5W111 196 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 APOBEC3HQ6NTF7 200 aaKnown RBP13.34□□□□□ -0.27
LMCD1-205ENST00000454244 HHIPL2Q6UWX4 724 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 SLC10A4Q96EP9 437 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 CLMNQ96JQ2 1002 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 TEPSINQ96N21 525 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 TMEM39BQ9GZU3 492 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 TMOD2Q9NZR1 351 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 AKAP2Q9Y2D5 859 aa13.34□□□□□ -0.27
LMCD1-205ENST00000454244 PCNTO95613 3336 aa13.33□□□□□ -0.28
LMCD1-205ENST00000454244 IREB2P48200 963 aaKnown RBP13.33□□□□□ -0.28
LMCD1-205ENST00000454244 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.28
LMCD1-205ENST00000454244 XAGE2Q96GT9 111 aa13.33□□□□□ -0.28
LMCD1-205ENST00000454244 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
LMCD1-205ENST00000454244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-205ENST00000454244 LDHBP07195 334 aaKnown RBP13.32□□□□□ -0.28
LMCD1-205ENST00000454244 TM4SF4P48230 202 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 RASGRF1Q13972 1273 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 ABHD8Q96I13 439 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 WNK4Q96J92 1243 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 NEUROD6Q96NK8 337 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 DAGLAQ9Y4D2 1042 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 SALL1Q9NSC2 1324 aa13.32□□□□□ -0.28
LMCD1-205ENST00000454244 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
LMCD1-205ENST00000454244 ZBTB7BO15156 539 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-205ENST00000454244 ZBTB22O15209 634 aa13.31□□□□□ -0.28
LMCD1-205ENST00000454244 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
LMCD1-205ENST00000454244 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
LMCD1-205ENST00000454244 POLA2Q14181 598 aa13.31□□□□□ -0.28
LMCD1-205ENST00000454244 MVPQ14764 893 aaKnown RBP13.31□□□□□ -0.28
LMCD1-205ENST00000454244 ANKRD13AQ8IZ07 590 aa13.31□□□□□ -0.28
LMCD1-205ENST00000454244 MANSC4A6NHS7 340 aaPredicted RBP13.3□□□□□ -0.28
LMCD1-205ENST00000454244 TBC1D8O95759 1140 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 OS9Q13438 667 aaPredicted RBP13.3□□□□□ -0.28
LMCD1-205ENST00000454244 DGKZQ13574 1117 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 GORABQ5T7V8 394 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 FKBP1CQ5VVH2 108 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 FAM83AQ86UY5 434 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 ZGPATQ8N5A5 531 aaKnown RBP13.3□□□□□ -0.28
LMCD1-205ENST00000454244 PANK1Q8TE04 598 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 SSH3Q8TE77 659 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 MCOLN1Q9GZU1 580 aa13.3□□□□□ -0.28
LMCD1-205ENST00000454244 ECM29Q5VYK3 1845 aa13.29□□□□□ -0.28
LMCD1-205ENST00000454244 SURF6O75683 361 aaKnown RBP13.29□□□□□ -0.28
LMCD1-205ENST00000454244 ZBTB48P10074 688 aaPredicted RBP13.29□□□□□ -0.28
LMCD1-205ENST00000454244 GJA5P36382 358 aa13.29□□□□□ -0.28
LMCD1-205ENST00000454244 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
LMCD1-205ENST00000454244 CDC42EP5Q6NZY7 148 aa13.29□□□□□ -0.28
LMCD1-205ENST00000454244 ELP3Q9H9T3 547 aa13.29□□□□□ -0.28
LMCD1-205ENST00000454244 ABCF2Q9UG63 623 aa13.29□□□□□ -0.28
LMCD1-205ENST00000454244 PDS5AQ29RF7 1337 aaKnown RBP13.29□□□□□ -0.28
LMCD1-205ENST00000454244 TCP10Q12799 353 aa13.28□□□□□ -0.28
LMCD1-205ENST00000454244 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms