RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 NIM1KQ8IY84 436 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 JDP2Q8WYK2 163 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 FBXW7Q969H0 707 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 TBC1D32Q96NH3 1257 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 SEC62Q99442 399 aaKnown RBP15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 ZNRF3Q9ULT6 936 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 JAG2Q9Y219 1238 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 MYH2Q9UKX2 1941 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 MAST3O60307 1309 aa15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 CHGBP05060 677 aa15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 PRDX5P30044 214 aa15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 RBM25P49756 843 aaKnown RBP15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 SLFNL1Q499Z3 407 aa15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 MAP4K1Q92918 833 aa15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 AIDAQ96BJ3 306 aa15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 PUS7LQ9H0K6 701 aaKnown RBP15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 IL25Q9H293 177 aa15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 RBM19Q9Y4C8 960 aaKnown RBP15.03■□□□□ -0
HLA-DPA1-244ENST00000453337 PSME4Q14997 1843 aa15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 M0R2C6 588 aa15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 NFKBIEO00221 500 aa15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 GNAT2P19087 354 aa15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 ARHGAP27Q6ZUM4 889 aa15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 ZNF589Q86UQ0 364 aaPredicted RBP15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 FAM163AQ96GL9 167 aaPredicted RBP15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 NOL10Q9BSC4 688 aaKnown RBP15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 DSCC1Q9BVC3 393 aa15.02■□□□□ -0
HLA-DPA1-244ENST00000453337 SCN9AQ15858 1988 aa15.02□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MAGEB6P1A0A0J9YX57 407 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 GPAA1O43292 621 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 PTH1RQ03431 593 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 DACT2Q5SW24 774 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 CCDC129Q6ZRS4 1044 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 CERS3Q8IU89 383 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 STRBPQ96SI9 672 aaKnown RBP15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MRIQ9BWK5 157 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 KCNQ5Q9NR82 932 aa15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
HLA-DPA1-244ENST00000453337 YDJCA8MPS7 323 aa15□□□□□ -0.01
HLA-DPA1-244ENST00000453337 PATL2C9JE40 543 aaKnown RBP15□□□□□ -0.01
HLA-DPA1-244ENST00000453337 BAG3O95817 575 aa15□□□□□ -0.01
HLA-DPA1-244ENST00000453337 VIL1P09327 827 aaKnown RBP15□□□□□ -0.01
HLA-DPA1-244ENST00000453337 HSPD1P10809 573 aaKnown RBP15□□□□□ -0.01
HLA-DPA1-244ENST00000453337 CTNNA3Q9UI47 895 aa15□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MAST2Q6P0Q8 1798 aa15□□□□□ -0.01
HLA-DPA1-244ENST00000453337 RPAP1Q9BWH6 1393 aaPredicted RBP14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MYO3BQ8WXR4 1341 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 HSPA4P34932 840 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 ANAPC15P60006 121 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 PPP4CP60510 307 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 HDLBPQ00341 1268 aaKnown RBP14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 TNIP1Q15025 636 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 GRIK5Q16478 980 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 RNF20Q5VTR2 975 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 CERS5Q8N5B7 392 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 ZNF384Q8TF68 577 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 TTF2Q9UNY4 1162 aaKnown RBP14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 RBM8AQ9Y5S9 174 aaKnown RBP14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 DICER1Q9UPY3 1922 aaKnown RBP14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 SBF1O95248 1867 aa14.99□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MBD4O95243 580 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 APPP05067 770 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 PLCG2P16885 1265 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 NECTIN1Q15223 517 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 ALX1Q15699 326 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MIGA1Q8NAN2 632 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 NACAP1Q9BZK3 213 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MROH7-TTC4A0A0A0MT08 1334 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 GPR75-ASB3A0A0A6YYF3 556 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 RAD17O75943 681 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 ZKSCAN1P17029 563 aaPredicted RBP14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 LMNB1P20700 586 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MMP14P50281 582 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 EIF6P56537 245 aaKnown RBP14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 RASSF7Q02833 373 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 CXCL9Q07325 125 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 CIAPIN1Q6FI81 312 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 RSBN1LQ6PCB5 846 aaPredicted RBP14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 HHIPL2Q6UWX4 724 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 ADGRA1Q86SQ6 560 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 IL27Q8NEV9 243 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 RIOK1Q9BRS2 568 aaKnown RBP14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 MXD3Q9BW11 206 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 CRNKL1Q9BZJ0 848 aaKnown RBP14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 SLC4A4Q9Y6R1 1079 aa14.97□□□□□ -0.01
HLA-DPA1-244ENST00000453337 PSMD14O00487 310 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 DIXDC1Q155Q3 683 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 VPS53Q5VIR6 699 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 GIMAP6Q6P9H5 292 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 AGBL3Q8NEM8 1001 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 KCNB2Q92953 911 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 TEKT1Q969V4 418 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 AATFQ9NY61 560 aaKnown RBP eCLIP14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 HDAC9Q9UKV0 1011 aa14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 ZNF646O15015 1829 aaPredicted RBP14.96□□□□□ -0.01
HLA-DPA1-244ENST00000453337 GAKO14976 1311 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms