RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 PDE11AQ9HCR9 933 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 ACEP12821 1306 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 SMC2O95347 1197 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
CHL1-208ENST00000453040 L1RE1Q9UN81 338 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
CHL1-208ENST00000453040 USP5P45974 858 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
CHL1-208ENST00000453040 TMEM94Q12767 1356 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 AP1G2O75843 785 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 WWC2Q6AWC2 1192 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
CHL1-208ENST00000453040 ZNF609O15014 1411 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 ARFGEF2Q9Y6D5 1785 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
CHL1-208ENST00000453040 AMPHP49418 695 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 LONRF2Q1L5Z9 754 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 PARD3BQ8TEW8 1205 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 SPATA32Q96LK8 384 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 JPH2Q9BR39 696 aaPredicted RBP12.6□□□□□ -0.39
CHL1-208ENST00000453040 BICC1Q9H694 974 aaKnown RBP12.6□□□□□ -0.39
CHL1-208ENST00000453040 TLR7Q9NYK1 1049 aaKnown RBP12.6□□□□□ -0.39
CHL1-208ENST00000453040 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 ALDH1L1O75891 902 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 NMIQ13287 307 aaPredicted RBP12.6□□□□□ -0.39
CHL1-208ENST00000453040 MICAL1Q8TDZ2 1067 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
CHL1-208ENST00000453040 ALS2Q96Q42 1657 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
CHL1-208ENST00000453040 EFCAB8A8MWE9 144 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 TAF5LO75529 589 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 SKAP2O75563 359 aaPredicted RBP12.59□□□□□ -0.39
CHL1-208ENST00000453040 SURF6O75683 361 aaKnown RBP12.59□□□□□ -0.39
CHL1-208ENST00000453040 TMCO3Q6UWJ1 677 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 IMPACTQ9P2X3 320 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 AFDNP55196 1824 aaKnown RBP12.59□□□□□ -0.39
CHL1-208ENST00000453040 PHLPP2Q6ZVD8 1323 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
CHL1-208ENST00000453040 GCFC2P16383 781 aaKnown RBP12.59□□□□□ -0.39
CHL1-208ENST00000453040 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 RAB21Q9UL25 225 aa12.59□□□□□ -0.39
CHL1-208ENST00000453040 VWA3AA6NCI4 1184 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 CHGBP05060 677 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 TEX35Q5T0J7 233 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 TTLL7Q6ZT98 887 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 KIRREL3Q8IZU9 778 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 CWC15Q9P013 229 aaKnown RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 MYO1FO00160 1098 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 IVLP07476 585 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 ZRSR1Q15695 479 aaKnown RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 EAF2Q96CJ1 260 aaPredicted RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 TCEANC2Q96MN5 208 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 TFRCP02786 760 aaKnown RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 WDR24Q96S15 920 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 BAG1Q99933 345 aaPredicted RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 CARD6Q9BX69 1037 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 DDX20Q9UHI6 824 aaKnown RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 COL22A1Q8NFW1 1626 aaPredicted RBP12.58□□□□□ -0.4
CHL1-208ENST00000453040 SPEF2Q9C093 1822 aa12.58□□□□□ -0.4
CHL1-208ENST00000453040 EIF4A1P60842 406 aaKnown RBP12.57□□□□□ -0.4
CHL1-208ENST00000453040 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 HNRNPLLQ8WVV9 542 aaKnown RBP12.57□□□□□ -0.4
CHL1-208ENST00000453040 ECHDC1Q9NTX5 307 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 PXDNQ92626 1479 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 SCN11AQ9UI33 1791 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 RASSF9O75901 435 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 RPS6KA3P51812 740 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 NSUN7Q8NE18 718 aaKnown RBP12.57□□□□□ -0.4
CHL1-208ENST00000453040 TBC1D5Q92609 795 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 MRFAP1Q9Y605 127 aa12.57□□□□□ -0.4
CHL1-208ENST00000453040 MAP3K13O43283 966 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 LIG3P49916 1009 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 RAB27AP51159 221 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 STX1AQ16623 288 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 SPRED3Q2MJR0 410 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 CTAGE5O15320 804 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 FDPSP14324 419 aaKnown RBP12.56□□□□□ -0.4
CHL1-208ENST00000453040 FOSBP53539 338 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 EXOSC10Q01780 885 aaKnown RBP12.56□□□□□ -0.4
CHL1-208ENST00000453040 VPS18Q9P253 973 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
CHL1-208ENST00000453040 GOLGA6L4A6NEF3 574 aa12.55□□□□□ -0.4
CHL1-208ENST00000453040 IRX1P78414 480 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms