RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RNF186Q9NXI6 227 aa15.56■□□□□ 0.08
CPSF4-208ENST00000452047 FZD1Q9UP38 647 aa15.56■□□□□ 0.08
CPSF4-208ENST00000452047 PA2G4Q9UQ80 394 aaKnown RBP15.56■□□□□ 0.08
CPSF4-208ENST00000452047 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
CPSF4-208ENST00000452047 GNAI3P08754 354 aa15.55■□□□□ 0.08
CPSF4-208ENST00000452047 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
CPSF4-208ENST00000452047 MTX1Q13505 466 aa15.55■□□□□ 0.08
CPSF4-208ENST00000452047 RASA3Q14644 834 aa15.55■□□□□ 0.08
CPSF4-208ENST00000452047 TDRD3Q9H7E2 651 aaKnown RBP15.55■□□□□ 0.08
CPSF4-208ENST00000452047 ZNF70Q9UC06 446 aaPredicted RBP15.55■□□□□ 0.08
CPSF4-208ENST00000452047 ANGEL1Q9UNK9 670 aaKnown RBP15.55■□□□□ 0.08
CPSF4-208ENST00000452047 TRPA1O75762 1119 aa15.54■□□□□ 0.08
CPSF4-208ENST00000452047 IL15P40933 162 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-208ENST00000452047 ATP2B3Q16720 1220 aa15.54■□□□□ 0.08
CPSF4-208ENST00000452047 NBPF12Q5TAG4 269 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-208ENST00000452047 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-208ENST00000452047 CEP126Q9P2H0 1117 aa15.54■□□□□ 0.08
CPSF4-208ENST00000452047 SUGT1Q9Y2Z0 365 aa15.54■□□□□ 0.08
CPSF4-208ENST00000452047 TNFAIP1Q13829 316 aa15.53■□□□□ 0.08
CPSF4-208ENST00000452047 SUPT20HL1Q3ZLR7 823 aa15.53■□□□□ 0.08
CPSF4-208ENST00000452047 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
CPSF4-208ENST00000452047 ABHD8Q96I13 439 aa15.53■□□□□ 0.08
CPSF4-208ENST00000452047 TEPSINQ96N21 525 aa15.53■□□□□ 0.08
CPSF4-208ENST00000452047 MRIQ9BWK5 157 aa15.53■□□□□ 0.08
CPSF4-208ENST00000452047 MAST3O60307 1309 aa15.52■□□□□ 0.08
CPSF4-208ENST00000452047 ZBED9Q6R2W3 1325 aa15.52■□□□□ 0.08
CPSF4-208ENST00000452047 SRGAP3O43295 1099 aa15.52■□□□□ 0.08
CPSF4-208ENST00000452047 PPP1R12BO60237 982 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-208ENST00000452047 TM4SF4P48230 202 aa15.52■□□□□ 0.08
CPSF4-208ENST00000452047 CDAN1Q8IWY9 1227 aa15.52■□□□□ 0.08
CPSF4-208ENST00000452047 CLUAP1Q96AJ1 413 aa15.52■□□□□ 0.08
CPSF4-208ENST00000452047 ZDHHC15Q96MV8 337 aa15.52■□□□□ 0.08
CPSF4-208ENST00000452047 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
CPSF4-208ENST00000452047 ZBTB22O15209 634 aa15.51■□□□□ 0.07
CPSF4-208ENST00000452047 MKRN3Q13064 507 aaKnown RBP15.51■□□□□ 0.07
CPSF4-208ENST00000452047 SPRYD7Q5W111 196 aa15.51■□□□□ 0.07
CPSF4-208ENST00000452047 ZKSCAN2Q63HK3 967 aa15.51■□□□□ 0.07
CPSF4-208ENST00000452047 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
CPSF4-208ENST00000452047 WDR66Q8TBY9 1149 aa15.51■□□□□ 0.07
CPSF4-208ENST00000452047 CLMNQ96JQ2 1002 aa15.51■□□□□ 0.07
CPSF4-208ENST00000452047 TCP10L2B9ZVM9 353 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 USP2O75604 605 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-208ENST00000452047 GNAI2P04899 355 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 ADORA1P30542 326 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 PHKA1P46020 1223 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 HHIPL2Q6UWX4 724 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 TMEM57Q8N5G2 664 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 MCOLN1Q9GZU1 580 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 TMEM39BQ9GZU3 492 aa15.5■□□□□ 0.07
CPSF4-208ENST00000452047 SALL1Q9NSC2 1324 aa15.49■□□□□ 0.07
CPSF4-208ENST00000452047 HTTP42858 3142 aa15.49■□□□□ 0.07
CPSF4-208ENST00000452047 PRDX5P30044 214 aa15.49■□□□□ 0.07
CPSF4-208ENST00000452047 IREB2P48200 963 aaKnown RBP15.49■□□□□ 0.07
CPSF4-208ENST00000452047 TNNI2P48788 182 aa15.49■□□□□ 0.07
CPSF4-208ENST00000452047 CACNB3P54284 484 aa15.49■□□□□ 0.07
CPSF4-208ENST00000452047 SREBF2Q12772 1141 aa15.49■□□□□ 0.07
CPSF4-208ENST00000452047 WNK4Q96J92 1243 aa15.49■□□□□ 0.07
CPSF4-208ENST00000452047 GNL3LQ9NVN8 582 aaKnown RBP15.49■□□□□ 0.07
CPSF4-208ENST00000452047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-208ENST00000452047 PNMA6EA0A0J9YXQ4 647 aa15.48■□□□□ 0.07
CPSF4-208ENST00000452047 SEMA3EO15041 775 aa15.48■□□□□ 0.07
CPSF4-208ENST00000452047 ZBTB48P10074 688 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-208ENST00000452047 TFCP2Q12800 502 aa15.48■□□□□ 0.07
CPSF4-208ENST00000452047 FKBP1CQ5VVH2 108 aa15.48■□□□□ 0.07
CPSF4-208ENST00000452047 CCDC102BQ68D86 513 aa15.48■□□□□ 0.07
CPSF4-208ENST00000452047 SLC10A4Q96EP9 437 aa15.48■□□□□ 0.07
CPSF4-208ENST00000452047 DENND2AQ9ULE3 1009 aa15.48■□□□□ 0.07
CPSF4-208ENST00000452047 RPAP1Q9BWH6 1393 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-208ENST00000452047 MYH2Q9UKX2 1941 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 A0A1B0GUL7 405 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 GJA5P36382 358 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 TIMM10P62072 90 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 DGKZQ13574 1117 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 FAM83AQ86UY5 434 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 ANKRD13AQ8IZ07 590 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 CFHR5Q9BXR6 569 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
CPSF4-208ENST00000452047 PDS5AQ29RF7 1337 aaKnown RBP15.46■□□□□ 0.07
CPSF4-208ENST00000452047 MANSC4A6NHS7 340 aaPredicted RBP15.46■□□□□ 0.07
CPSF4-208ENST00000452047 TBC1D8O95759 1140 aa15.46■□□□□ 0.07
CPSF4-208ENST00000452047 RLBP1P12271 317 aa15.46■□□□□ 0.07
CPSF4-208ENST00000452047 RASGRF1Q13972 1273 aa15.46■□□□□ 0.07
CPSF4-208ENST00000452047 DIXDC1Q155Q3 683 aa15.46■□□□□ 0.07
CPSF4-208ENST00000452047 TMOD2Q9NZR1 351 aa15.46■□□□□ 0.07
CPSF4-208ENST00000452047 AKAP2Q9Y2D5 859 aa15.46■□□□□ 0.07
CPSF4-208ENST00000452047 CENPFP49454 3210 aa15.45■□□□□ 0.06
CPSF4-208ENST00000452047 LDHBP07195 334 aaKnown RBP15.45■□□□□ 0.06
CPSF4-208ENST00000452047 NOM1Q5C9Z4 860 aaKnown RBP15.45■□□□□ 0.06
CPSF4-208ENST00000452047 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-208ENST00000452047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.45■□□□□ 0.06
CPSF4-208ENST00000452047 XAGE2Q96GT9 111 aa15.45■□□□□ 0.06
CPSF4-208ENST00000452047 IGF2BP3O00425 579 aaKnown RBP eCLIP15.44■□□□□ 0.06
CPSF4-208ENST00000452047 INHBEP58166 350 aa15.44■□□□□ 0.06
CPSF4-208ENST00000452047 VGLL4Q14135 290 aa15.44■□□□□ 0.06
CPSF4-208ENST00000452047 POLA2Q14181 598 aa15.44■□□□□ 0.06
CPSF4-208ENST00000452047 MVPQ14764 893 aaKnown RBP15.44■□□□□ 0.06
CPSF4-208ENST00000452047 CDC42EP5Q6NZY7 148 aa15.44■□□□□ 0.06
CPSF4-208ENST00000452047 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
CPSF4-208ENST00000452047 FTSJ3Q8IY81 847 aaKnown RBP15.44■□□□□ 0.06
CPSF4-208ENST00000452047 ZNF296Q8WUU4 475 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms