RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 GNAI3P08754 354 aa26.89■■□□□ 1.9
C9orf3-208ENST00000451893 IREB2P48200 963 aaKnown RBP26.89■■□□□ 1.9
C9orf3-208ENST00000451893 DZIP1LQ8IYY4 767 aaKnown RBP26.89■■□□□ 1.9
C9orf3-208ENST00000451893 ARHGAP45Q92619 1136 aa26.89■■□□□ 1.9
C9orf3-208ENST00000451893 TEKT1Q969V4 418 aa26.89■■□□□ 1.9
C9orf3-208ENST00000451893 SLC10A4Q96EP9 437 aa26.89■■□□□ 1.9
C9orf3-208ENST00000451893 GNL3LQ9NVN8 582 aaKnown RBP26.89■■□□□ 1.9
C9orf3-208ENST00000451893 ZNF70Q9UC06 446 aaPredicted RBP26.89■■□□□ 1.9
C9orf3-208ENST00000451893 FBXO3Q9UK99 471 aa26.89■■□□□ 1.9
C9orf3-208ENST00000451893 RFX5P48382 616 aaPredicted RBP26.88■■□□□ 1.89
C9orf3-208ENST00000451893 RASA3Q14644 834 aa26.88■■□□□ 1.89
C9orf3-208ENST00000451893 MCOLN1Q9GZU1 580 aa26.88■■□□□ 1.89
C9orf3-208ENST00000451893 FZD1Q9UP38 647 aa26.88■■□□□ 1.89
C9orf3-208ENST00000451893 TCP10L2B9ZVM9 353 aa26.87■■□□□ 1.89
C9orf3-208ENST00000451893 ATP2B3Q16720 1220 aa26.87■■□□□ 1.89
C9orf3-208ENST00000451893 SPDYE2Q495Y8 402 aa26.87■■□□□ 1.89
C9orf3-208ENST00000451893 MEIS3Q99687 375 aa26.87■■□□□ 1.89
C9orf3-208ENST00000451893 GTF3C3Q9Y5Q9 886 aa26.87■■□□□ 1.89
C9orf3-208ENST00000451893 CIAO1O76071 339 aa26.86■■□□□ 1.89
C9orf3-208ENST00000451893 NBPF12Q5TAG4 269 aaPredicted RBP26.86■■□□□ 1.89
C9orf3-208ENST00000451893 FGFR2P21802 821 aa26.85■■□□□ 1.89
C9orf3-208ENST00000451893 IL15P40933 162 aaPredicted RBP26.85■■□□□ 1.89
C9orf3-208ENST00000451893 WDR66Q8TBY9 1149 aa26.85■■□□□ 1.89
C9orf3-208ENST00000451893 NEFLP07196 543 aa26.84■■□□□ 1.89
C9orf3-208ENST00000451893 HDLBPQ00341 1268 aaKnown RBP26.84■■□□□ 1.89
C9orf3-208ENST00000451893 LDLRAD1Q5T700 205 aa26.83■■□□□ 1.89
C9orf3-208ENST00000451893 SPRYD7Q5W111 196 aa26.83■■□□□ 1.89
C9orf3-208ENST00000451893 INTS3Q68E01 1043 aaKnown RBP26.83■■□□□ 1.89
C9orf3-208ENST00000451893 ATG9AQ7Z3C6 839 aa26.83■■□□□ 1.89
C9orf3-208ENST00000451893 PA2G4Q9UQ80 394 aaKnown RBP26.83■■□□□ 1.89
C9orf3-208ENST00000451893 SUGT1Q9Y2Z0 365 aa26.83■■□□□ 1.89
C9orf3-208ENST00000451893 AOX1Q06278 1338 aa26.83■■□□□ 1.89
C9orf3-208ENST00000451893 SRGAP3O43295 1099 aa26.82■■□□□ 1.88
C9orf3-208ENST00000451893 ATF7IPQ6VMQ6 1270 aa26.82■■□□□ 1.88
C9orf3-208ENST00000451893 CLUAP1Q96AJ1 413 aa26.82■■□□□ 1.88
C9orf3-208ENST00000451893 SUPT16HQ9Y5B9 1047 aaKnown RBP26.82■■□□□ 1.88
C9orf3-208ENST00000451893 MANSC4A6NHS7 340 aaPredicted RBP26.81■■□□□ 1.88
C9orf3-208ENST00000451893 BCAR3O75815 825 aa26.81■■□□□ 1.88
C9orf3-208ENST00000451893 TBC1D8O95759 1140 aa26.81■■□□□ 1.88
C9orf3-208ENST00000451893 MAP3K11Q16584 847 aa26.81■■□□□ 1.88
C9orf3-208ENST00000451893 ANKRD13AQ8IZ07 590 aa26.81■■□□□ 1.88
C9orf3-208ENST00000451893 SSC5DA1L4H1 1573 aa26.8■■□□□ 1.88
C9orf3-208ENST00000451893 TM4SF4P48230 202 aa26.8■■□□□ 1.88
C9orf3-208ENST00000451893 GRIK5Q16478 980 aa26.8■■□□□ 1.88
C9orf3-208ENST00000451893 UNCXA6NJT0 531 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 ALDH1A1P00352 501 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 ZBTB48P10074 688 aaPredicted RBP26.79■■□□□ 1.88
C9orf3-208ENST00000451893 TRIM27P14373 513 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 WNK4Q96J92 1243 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 CLMNQ96JQ2 1002 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 TMEM39BQ9GZU3 492 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 COPRSQ9NQ92 184 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 RCAN3Q9UKA8 241 aa26.79■■□□□ 1.88
C9orf3-208ENST00000451893 GNAI2P04899 355 aa26.78■■□□□ 1.88
C9orf3-208ENST00000451893 CACNB3P54284 484 aa26.78■■□□□ 1.88
C9orf3-208ENST00000451893 INHBEP58166 350 aa26.78■■□□□ 1.88
C9orf3-208ENST00000451893 ZKSCAN2Q63HK3 967 aa26.78■■□□□ 1.88
C9orf3-208ENST00000451893 ZDHHC15Q96MV8 337 aa26.78■■□□□ 1.88
C9orf3-208ENST00000451893 DENND2AQ9ULE3 1009 aa26.78■■□□□ 1.88
C9orf3-208ENST00000451893 AK9Q5TCS8 1911 aa26.78■■□□□ 1.88
C9orf3-208ENST00000451893 USP2O75604 605 aaPredicted RBP26.77■■□□□ 1.88
C9orf3-208ENST00000451893 LDHBP07195 334 aaKnown RBP26.77■■□□□ 1.88
C9orf3-208ENST00000451893 OTUD7BQ6GQQ9 843 aa26.77■■□□□ 1.88
C9orf3-208ENST00000451893 FTSJ3Q8IY81 847 aaKnown RBP26.77■■□□□ 1.88
C9orf3-208ENST00000451893 HOOK2Q96ED9 719 aa26.77■■□□□ 1.88
C9orf3-208ENST00000451893 AKAP2Q9Y2D5 859 aa26.77■■□□□ 1.88
C9orf3-208ENST00000451893 CSADQ9Y600 493 aa26.77■■□□□ 1.88
C9orf3-208ENST00000451893 CTU1Q7Z7A3 348 aaKnown RBP26.76■■□□□ 1.87
C9orf3-208ENST00000451893 MRIQ9BWK5 157 aa26.76■■□□□ 1.87
C9orf3-208ENST00000451893 ELP3Q9H9T3 547 aa26.76■■□□□ 1.87
C9orf3-208ENST00000451893 SEMA3EO15041 775 aa26.75■■□□□ 1.87
C9orf3-208ENST00000451893 ERICH6BQ5W0A0 696 aa26.75■■□□□ 1.87
C9orf3-208ENST00000451893 HHIPL2Q6UWX4 724 aa26.75■■□□□ 1.87
C9orf3-208ENST00000451893 ZGPATQ8N5A5 531 aaKnown RBP26.75■■□□□ 1.87
C9orf3-208ENST00000451893 GORABQ5T7V8 394 aa26.74■■□□□ 1.87
C9orf3-208ENST00000451893 OTOFQ9HC10 1997 aa26.74■■□□□ 1.87
C9orf3-208ENST00000451893 PHKA1P46020 1223 aa26.73■■□□□ 1.87
C9orf3-208ENST00000451893 G3BP1Q13283 466 aaKnown RBP eCLIP26.73■■□□□ 1.87
C9orf3-208ENST00000451893 ZNF296Q8WUU4 475 aaPredicted RBP26.73■■□□□ 1.87
C9orf3-208ENST00000451893 NEUROD6Q96NK8 337 aa26.73■■□□□ 1.87
C9orf3-208ENST00000451893 GPR25O00155 361 aa26.72■■□□□ 1.87
C9orf3-208ENST00000451893 OPTNQ96CV9 577 aa26.72■■□□□ 1.87
C9orf3-208ENST00000451893 TNNQ9UQP3 1299 aa26.72■■□□□ 1.87
C9orf3-208ENST00000451893 PRDX5P30044 214 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 ADORA1P30542 326 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 MAP3K9P80192 1104 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 TFCP2Q12800 502 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 MVPQ14764 893 aaKnown RBP26.71■■□□□ 1.87
C9orf3-208ENST00000451893 DCAF15Q66K64 600 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 CCDC102BQ68D86 513 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 APOBEC3HQ6NTF7 200 aaKnown RBP26.71■■□□□ 1.87
C9orf3-208ENST00000451893 FAM83AQ86UY5 434 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 DZIP1Q86YF9 867 aaKnown RBP26.71■■□□□ 1.87
C9orf3-208ENST00000451893 IFNL1Q8IU54 200 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 TEPSINQ96N21 525 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 ABCF2Q9UG63 623 aa26.71■■□□□ 1.87
C9orf3-208ENST00000451893 A0A1B0GUL7 405 aa26.7■■□□□ 1.86
C9orf3-208ENST00000451893 FKTNO75072 461 aa26.7■■□□□ 1.86
C9orf3-208ENST00000451893 TIMM10P62072 90 aa26.7■■□□□ 1.86
C9orf3-208ENST00000451893 OS9Q13438 667 aaPredicted RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms