RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
VPS33A-202ENST00000451053 GPBP1L1Q9HC44 474 aaPredicted RBP15.86■□□□□ 0.13
VPS33A-202ENST00000451053 PAG1Q9NWQ8 432 aa15.86■□□□□ 0.13
VPS33A-202ENST00000451053 SUGT1Q9Y2Z0 365 aa15.86■□□□□ 0.13
VPS33A-202ENST00000451053 MYO5AQ9Y4I1 1855 aaKnown RBP15.85■□□□□ 0.13
VPS33A-202ENST00000451053 H7C1D1 291 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 MAP4K4O95819 1239 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-202ENST00000451053 VEGFAP15692 232 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-202ENST00000451053 EPHX2P34913 555 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 TBC1D10BQ4KMP7 808 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-202ENST00000451053 SPTY2D1Q68D10 685 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-202ENST00000451053 ERICH6Q7L0X2 663 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 OGFOD1Q8N543 542 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 ZNF384Q8TF68 577 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 LRP2BPQ9P2M1 347 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 HDAC9Q9UKV0 1011 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 PCDHAC2Q9Y5I4 1007 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 AOX1Q06278 1338 aa15.85■□□□□ 0.13
VPS33A-202ENST00000451053 DOCK2Q92608 1830 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 MECOMQ03112 1051 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 DIXDC1Q155Q3 683 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 RBM26Q5T8P6 1007 aaKnown RBP15.84■□□□□ 0.13
VPS33A-202ENST00000451053 DZIP1Q86YF9 867 aaKnown RBP15.84■□□□□ 0.13
VPS33A-202ENST00000451053 OSBPL3Q9H4L5 887 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 MYOZ2Q9NPC6 264 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 ADARB2Q9NS39 739 aaKnown RBP15.84■□□□□ 0.13
VPS33A-202ENST00000451053 RAI14Q9P0K7 980 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 MAST3O60307 1309 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 MAST2Q6P0Q8 1798 aa15.84■□□□□ 0.13
VPS33A-202ENST00000451053 IDH1O75874 414 aaKnown RBP15.83■□□□□ 0.12
VPS33A-202ENST00000451053 CRKP46108 304 aa15.83■□□□□ 0.12
VPS33A-202ENST00000451053 HIRAP54198 1017 aaPredicted RBP15.83■□□□□ 0.12
VPS33A-202ENST00000451053 TTF1Q15361 905 aaPredicted RBP15.83■□□□□ 0.12
VPS33A-202ENST00000451053 KIF4BQ2VIQ3 1234 aa15.83■□□□□ 0.12
VPS33A-202ENST00000451053 CFAP100Q494V2 611 aa15.83■□□□□ 0.12
VPS33A-202ENST00000451053 NSUN4Q96CB9 384 aaKnown RBP15.83■□□□□ 0.12
VPS33A-202ENST00000451053 SERPINA10Q9UK55 444 aa15.83■□□□□ 0.12
VPS33A-202ENST00000451053 KIF3CO14782 793 aa15.82■□□□□ 0.12
VPS33A-202ENST00000451053 POTEIP0CG38 1075 aa15.82■□□□□ 0.12
VPS33A-202ENST00000451053 POTEJP0CG39 1038 aa15.82■□□□□ 0.12
VPS33A-202ENST00000451053 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-202ENST00000451053 ZBED3Q96IU2 234 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-202ENST00000451053 ASTN2O75129 1339 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-202ENST00000451053 MMP14P50281 582 aa15.81■□□□□ 0.12
VPS33A-202ENST00000451053 RBM5P52756 815 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS33A-202ENST00000451053 HDLBPQ00341 1268 aaKnown RBP15.81■□□□□ 0.12
VPS33A-202ENST00000451053 DLGAP5Q15398 846 aa15.81■□□□□ 0.12
VPS33A-202ENST00000451053 USP50Q70EL3 339 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-202ENST00000451053 TEKT1Q969V4 418 aa15.81■□□□□ 0.12
VPS33A-202ENST00000451053 MRIQ9BWK5 157 aa15.81■□□□□ 0.12
VPS33A-202ENST00000451053 DAGLAQ9Y4D2 1042 aa15.81■□□□□ 0.12
VPS33A-202ENST00000451053 GAKO14976 1311 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 WNT10BO00744 389 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 MAP3K12Q12852 859 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 NBPF9Q3BBW0 867 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 TTC22Q5TAA0 569 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 NAA16Q6N069 864 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-202ENST00000451053 HHIPL2Q6UWX4 724 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 ADGRA1Q86SQ6 560 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 PNMA8AQ86V59 439 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-202ENST00000451053 MAGEB6Q8N7X4 407 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 KBTBD3Q8NAB2 608 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 MTMR14Q8NCE2 650 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 PRMT6Q96LA8 375 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-202ENST00000451053 ZDHHC15Q96MV8 337 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 MYH2Q9UKX2 1941 aa15.8■□□□□ 0.12
VPS33A-202ENST00000451053 MROH7-TTC4A0A0A0MT08 1334 aa15.79■□□□□ 0.12
VPS33A-202ENST00000451053 CHGBP05060 677 aa15.79■□□□□ 0.12
VPS33A-202ENST00000451053 GSPT1P15170 499 aaKnown RBP15.79■□□□□ 0.12
VPS33A-202ENST00000451053 PDE6AP16499 860 aa15.79■□□□□ 0.12
VPS33A-202ENST00000451053 RGS3P49796 1198 aa15.79■□□□□ 0.12
VPS33A-202ENST00000451053 GSTO1P78417 241 aa15.79■□□□□ 0.12
VPS33A-202ENST00000451053 SLFNL1Q499Z3 407 aa15.79■□□□□ 0.12
VPS33A-202ENST00000451053 CYP7A1P22680 504 aa15.78■□□□□ 0.12
VPS33A-202ENST00000451053 SLC9C2Q5TAH2 1124 aa15.78■□□□□ 0.12
VPS33A-202ENST00000451053 APOBEC3HQ6NTF7 200 aaKnown RBP15.78■□□□□ 0.12
VPS33A-202ENST00000451053 SLF2Q8IX21 1173 aa15.78■□□□□ 0.12
VPS33A-202ENST00000451053 FAM163AQ96GL9 167 aaPredicted RBP15.78■□□□□ 0.12
VPS33A-202ENST00000451053 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
VPS33A-202ENST00000451053 ZNF532Q9HCE3 1301 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 MYH7P12883 1935 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 TCRBV5S4A2TA0A5A2 114 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 CLRN2A0PK11 232 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 TRIM6-TRIM34B2RNG4 842 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 IGSF3O75054 1194 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 LDHCP07864 332 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 ADD2P35612 726 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 BTDP43251 543 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 EVI5LQ96CN4 794 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.77■□□□□ 0.12
VPS33A-202ENST00000451053 TDRD3Q9H7E2 651 aaKnown RBP15.77■□□□□ 0.12
VPS33A-202ENST00000451053 GGA3Q9NZ52 723 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
VPS33A-202ENST00000451053 ECM29Q5VYK3 1845 aa15.76■□□□□ 0.11
VPS33A-202ENST00000451053 GPR75-ASB3A0A0A6YYF3 556 aa15.76■□□□□ 0.11
VPS33A-202ENST00000451053 ANGEL2Q5VTE6 544 aaKnown RBP15.76■□□□□ 0.11
VPS33A-202ENST00000451053 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
VPS33A-202ENST00000451053 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms