RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 AACSQ86V21 672 aa17.62■□□□□ 0.41
COL3A1-203ENST00000450867 EXOC6Q8TAG9 804 aa17.62■□□□□ 0.41
COL3A1-203ENST00000450867 DCPSQ96C86 337 aaKnown RBP17.62■□□□□ 0.41
COL3A1-203ENST00000450867 LRRCC1Q9C099 1032 aa17.62■□□□□ 0.41
COL3A1-203ENST00000450867 CCDC8Q9H0W5 538 aaPredicted RBP17.62■□□□□ 0.41
COL3A1-203ENST00000450867 IL1RAPL2Q9NP60 686 aa17.62■□□□□ 0.41
COL3A1-203ENST00000450867 IGSF3O75054 1194 aa17.61■□□□□ 0.41
COL3A1-203ENST00000450867 PRDX5P30044 214 aa17.61■□□□□ 0.41
COL3A1-203ENST00000450867 ANGEL2Q5VTE6 544 aaKnown RBP17.61■□□□□ 0.41
COL3A1-203ENST00000450867 HHIPL2Q6UWX4 724 aa17.61■□□□□ 0.41
COL3A1-203ENST00000450867 GLIS2Q9BZE0 524 aaPredicted RBP17.61■□□□□ 0.41
COL3A1-203ENST00000450867 LDHBP07195 334 aaKnown RBP17.6■□□□□ 0.41
COL3A1-203ENST00000450867 CRKP46108 304 aa17.6■□□□□ 0.41
COL3A1-203ENST00000450867 TTC39AQ5SRH9 613 aa17.6■□□□□ 0.41
COL3A1-203ENST00000450867 PI16Q6UXB8 463 aa17.6■□□□□ 0.41
COL3A1-203ENST00000450867 KRT26Q7Z3Y9 468 aa17.6■□□□□ 0.41
COL3A1-203ENST00000450867 TEKT1Q969V4 418 aa17.6■□□□□ 0.41
COL3A1-203ENST00000450867 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
COL3A1-203ENST00000450867 ZDHHC15Q96MV8 337 aa17.6■□□□□ 0.41
COL3A1-203ENST00000450867 MYH7P12883 1935 aa17.6■□□□□ 0.41
COL3A1-203ENST00000450867 APBB1O00213 710 aa17.59■□□□□ 0.41
COL3A1-203ENST00000450867 SPTY2D1Q68D10 685 aaPredicted RBP17.59■□□□□ 0.41
COL3A1-203ENST00000450867 APOBEC3FQ8IUX4 373 aaKnown RBP17.59■□□□□ 0.41
COL3A1-203ENST00000450867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL3A1-203ENST00000450867 CREBZFQ9NS37 354 aa17.59■□□□□ 0.41
COL3A1-203ENST00000450867 PCDHAC2Q9Y5I4 1007 aa17.59■□□□□ 0.41
COL3A1-203ENST00000450867 CDK5RAP2Q96SN8 1893 aa17.58■□□□□ 0.41
COL3A1-203ENST00000450867 GAKO14976 1311 aa17.58■□□□□ 0.4
COL3A1-203ENST00000450867 AOX1Q06278 1338 aa17.58■□□□□ 0.4
COL3A1-203ENST00000450867 TRAF5O00463 557 aa17.58■□□□□ 0.4
COL3A1-203ENST00000450867 SPDYE2Q495Y8 402 aa17.58■□□□□ 0.4
COL3A1-203ENST00000450867 USP48Q86UV5 1035 aa17.58■□□□□ 0.4
COL3A1-203ENST00000450867 SULF1Q8IWU6 871 aa17.58■□□□□ 0.4
COL3A1-203ENST00000450867 FAM163AQ96GL9 167 aaPredicted RBP17.58■□□□□ 0.4
COL3A1-203ENST00000450867 FOCADQ5VW36 1801 aa17.57■□□□□ 0.4
COL3A1-203ENST00000450867 ADM5C9JUS6 153 aa17.57■□□□□ 0.4
COL3A1-203ENST00000450867 MYO1BO43795 1136 aa17.57■□□□□ 0.4
COL3A1-203ENST00000450867 IFIT2P09913 472 aaKnown RBP17.57■□□□□ 0.4
COL3A1-203ENST00000450867 FMR1Q06787 632 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL3A1-203ENST00000450867 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
COL3A1-203ENST00000450867 ZNF384Q8TF68 577 aa17.57■□□□□ 0.4
COL3A1-203ENST00000450867 GCC1Q96CN9 775 aa17.57■□□□□ 0.4
COL3A1-203ENST00000450867 DAGLAQ9Y4D2 1042 aa17.57■□□□□ 0.4
COL3A1-203ENST00000450867 PAPPA2Q9BXP8 1791 aa17.57■□□□□ 0.4
COL3A1-203ENST00000450867 TMEM88BA6NKF7 163 aa17.56■□□□□ 0.4
COL3A1-203ENST00000450867 CYP2E1P05181 493 aaPredicted RBP17.56■□□□□ 0.4
COL3A1-203ENST00000450867 FKBP1CQ5VVH2 108 aa17.56■□□□□ 0.4
COL3A1-203ENST00000450867 CST9Q5W186 159 aa17.56■□□□□ 0.4
COL3A1-203ENST00000450867 ABCF2Q9UG63 623 aa17.56■□□□□ 0.4
COL3A1-203ENST00000450867 PPP2R3BQ9Y5P8 575 aa17.56■□□□□ 0.4
COL3A1-203ENST00000450867 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
COL3A1-203ENST00000450867 ZAP70P43403 619 aa17.55■□□□□ 0.4
COL3A1-203ENST00000450867 RBM5P52756 815 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL3A1-203ENST00000450867 DIXDC1Q155Q3 683 aa17.55■□□□□ 0.4
COL3A1-203ENST00000450867 TMED8Q6PL24 325 aaPredicted RBP17.55■□□□□ 0.4
COL3A1-203ENST00000450867 ERICH6Q7L0X2 663 aa17.55■□□□□ 0.4
COL3A1-203ENST00000450867 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
COL3A1-203ENST00000450867 NSUN4Q96CB9 384 aaKnown RBP17.55■□□□□ 0.4
COL3A1-203ENST00000450867 CDCA5Q96FF9 252 aa17.55■□□□□ 0.4
COL3A1-203ENST00000450867 ZNF70Q9UC06 446 aaPredicted RBP17.55■□□□□ 0.4
COL3A1-203ENST00000450867 ATP5JP18859 108 aa17.54■□□□□ 0.4
COL3A1-203ENST00000450867 MECOMQ03112 1051 aa17.54■□□□□ 0.4
COL3A1-203ENST00000450867 TBC1D9Q6ZT07 1266 aa17.54■□□□□ 0.4
COL3A1-203ENST00000450867 SLF2Q8IX21 1173 aa17.54■□□□□ 0.4
COL3A1-203ENST00000450867 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
COL3A1-203ENST00000450867 TDRD3Q9H7E2 651 aaKnown RBP17.54■□□□□ 0.4
COL3A1-203ENST00000450867 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
COL3A1-203ENST00000450867 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
COL3A1-203ENST00000450867 MROH7-TTC4A0A0A0MT08 1334 aa17.53■□□□□ 0.4
COL3A1-203ENST00000450867 CELF2O95319 508 aaKnown RBP17.53■□□□□ 0.4
COL3A1-203ENST00000450867 TNFAIP1Q13829 316 aa17.53■□□□□ 0.4
COL3A1-203ENST00000450867 DLK2Q6UY11 383 aa17.53■□□□□ 0.4
COL3A1-203ENST00000450867 DZIP1Q86YF9 867 aaKnown RBP17.53■□□□□ 0.4
COL3A1-203ENST00000450867 THSD7BQ9C0I4 1608 aa17.53■□□□□ 0.4
COL3A1-203ENST00000450867 RPAP1Q9BWH6 1393 aaPredicted RBP17.53■□□□□ 0.4
COL3A1-203ENST00000450867 SALL3Q9BXA9 1300 aa17.52■□□□□ 0.4
COL3A1-203ENST00000450867 CLRN2A0PK11 232 aa17.52■□□□□ 0.4
COL3A1-203ENST00000450867 GSTO1P78417 241 aa17.52■□□□□ 0.4
COL3A1-203ENST00000450867 DNAJC5GQ8N7S2 189 aa17.52■□□□□ 0.4
COL3A1-203ENST00000450867 DEFB129Q9H1M3 183 aa17.52■□□□□ 0.4
COL3A1-203ENST00000450867 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
COL3A1-203ENST00000450867 SSC5DA1L4H1 1573 aa17.52■□□□□ 0.39
COL3A1-203ENST00000450867 GPR75-ASB3A0A0A6YYF3 556 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 RASSF10A6NK89 507 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
COL3A1-203ENST00000450867 LDHCP07864 332 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 FKBP1BP68106 108 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 IRX6P78412 446 aaPredicted RBP17.51■□□□□ 0.39
COL3A1-203ENST00000450867 FAM83AQ86UY5 434 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 HHIPL1Q96JK4 782 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 ECHDC1Q9NTX5 307 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 LRP2BPQ9P2M1 347 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 TLL2Q9Y6L7 1015 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 OTOFQ9HC10 1997 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 LAMB1P07942 1786 aa17.51■□□□□ 0.39
COL3A1-203ENST00000450867 IGHDP01880 384 aa17.5■□□□□ 0.39
COL3A1-203ENST00000450867 HTRA3P83110 453 aa17.5■□□□□ 0.39
COL3A1-203ENST00000450867 TTF1Q15361 905 aaPredicted RBP17.5■□□□□ 0.39
COL3A1-203ENST00000450867 CDC42EP5Q6NZY7 148 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms