RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 SPDYE2Q495Y8 402 aa27.32■■□□□ 1.96
CPSF7-208ENST00000450000 TEKT1Q969V4 418 aa27.32■■□□□ 1.96
CPSF7-208ENST00000450000 TMOD2Q9NZR1 351 aa27.32■■□□□ 1.96
CPSF7-208ENST00000450000 MAST3O60307 1309 aa27.32■■□□□ 1.96
CPSF7-208ENST00000450000 FGFR2P21802 821 aa27.31■■□□□ 1.96
CPSF7-208ENST00000450000 IL15P40933 162 aaPredicted RBP27.31■■□□□ 1.96
CPSF7-208ENST00000450000 MEIS3Q99687 375 aa27.31■■□□□ 1.96
CPSF7-208ENST00000450000 MCOLN1Q9GZU1 580 aa27.31■■□□□ 1.96
CPSF7-208ENST00000450000 TCP10L2B9ZVM9 353 aa27.3■■□□□ 1.96
CPSF7-208ENST00000450000 HDLBPQ00341 1268 aaKnown RBP27.3■■□□□ 1.96
CPSF7-208ENST00000450000 ATP2B3Q16720 1220 aa27.3■■□□□ 1.96
CPSF7-208ENST00000450000 LDLRAD1Q5T700 205 aa27.3■■□□□ 1.96
CPSF7-208ENST00000450000 NBPF12Q5TAG4 269 aaPredicted RBP27.3■■□□□ 1.96
CPSF7-208ENST00000450000 MIER1Q8N108 512 aa27.3■■□□□ 1.96
CPSF7-208ENST00000450000 WDR66Q8TBY9 1149 aa27.3■■□□□ 1.96
CPSF7-208ENST00000450000 FZD1Q9UP38 647 aa27.3■■□□□ 1.96
CPSF7-208ENST00000450000 INTS3Q68E01 1043 aaKnown RBP27.29■■□□□ 1.96
CPSF7-208ENST00000450000 ATG9AQ7Z3C6 839 aa27.29■■□□□ 1.96
CPSF7-208ENST00000450000 SUGT1Q9Y2Z0 365 aa27.29■■□□□ 1.96
CPSF7-208ENST00000450000 UNCXA6NJT0 531 aa27.27■■□□□ 1.96
CPSF7-208ENST00000450000 TM4SF4P48230 202 aa27.27■■□□□ 1.96
CPSF7-208ENST00000450000 MAP3K11Q16584 847 aa27.27■■□□□ 1.96
CPSF7-208ENST00000450000 SPRYD7Q5W111 196 aa27.27■■□□□ 1.96
CPSF7-208ENST00000450000 AOX1Q06278 1338 aa27.26■■□□□ 1.95
CPSF7-208ENST00000450000 SRGAP3O43295 1099 aa27.26■■□□□ 1.95
CPSF7-208ENST00000450000 GRIK5Q16478 980 aa27.26■■□□□ 1.95
CPSF7-208ENST00000450000 ATF7IPQ6VMQ6 1270 aa27.26■■□□□ 1.95
CPSF7-208ENST00000450000 PA2G4Q9UQ80 394 aaKnown RBP27.26■■□□□ 1.95
CPSF7-208ENST00000450000 MANSC4A6NHS7 340 aaPredicted RBP27.25■■□□□ 1.95
CPSF7-208ENST00000450000 BCAR3O75815 825 aa27.25■■□□□ 1.95
CPSF7-208ENST00000450000 TBC1D8O95759 1140 aa27.25■■□□□ 1.95
CPSF7-208ENST00000450000 INHBEP58166 350 aa27.25■■□□□ 1.95
CPSF7-208ENST00000450000 ANKRD13AQ8IZ07 590 aa27.25■■□□□ 1.95
CPSF7-208ENST00000450000 MRIQ9BWK5 157 aa27.25■■□□□ 1.95
CPSF7-208ENST00000450000 COPRSQ9NQ92 184 aa27.25■■□□□ 1.95
CPSF7-208ENST00000450000 CLUAP1Q96AJ1 413 aa27.24■■□□□ 1.95
CPSF7-208ENST00000450000 USP2O75604 605 aaPredicted RBP27.23■■□□□ 1.95
CPSF7-208ENST00000450000 ALDH1A1P00352 501 aa27.23■■□□□ 1.95
CPSF7-208ENST00000450000 GNAI2P04899 355 aa27.23■■□□□ 1.95
CPSF7-208ENST00000450000 ZBTB48P10074 688 aaPredicted RBP27.23■■□□□ 1.95
CPSF7-208ENST00000450000 TRIM27P14373 513 aa27.23■■□□□ 1.95
CPSF7-208ENST00000450000 ZDHHC15Q96MV8 337 aa27.23■■□□□ 1.95
CPSF7-208ENST00000450000 ZKSCAN2Q63HK3 967 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 HOOK2Q96ED9 719 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 WNK4Q96J92 1243 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 CLMNQ96JQ2 1002 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 TMEM39BQ9GZU3 492 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 DENND2AQ9ULE3 1009 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 AKAP2Q9Y2D5 859 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 CASP8AP2Q9UKL3 1982 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 AKAP11Q9UKA4 1901 aa27.22■■□□□ 1.95
CPSF7-208ENST00000450000 OTUD7BQ6GQQ9 843 aa27.21■■□□□ 1.95
CPSF7-208ENST00000450000 HHIPL2Q6UWX4 724 aa27.21■■□□□ 1.95
CPSF7-208ENST00000450000 SEMA3EO15041 775 aa27.2■■□□□ 1.94
CPSF7-208ENST00000450000 LDHBP07195 334 aaKnown RBP27.2■■□□□ 1.94
CPSF7-208ENST00000450000 CACNB3P54284 484 aa27.2■■□□□ 1.94
CPSF7-208ENST00000450000 CTU1Q7Z7A3 348 aaKnown RBP27.2■■□□□ 1.94
CPSF7-208ENST00000450000 CSADQ9Y600 493 aa27.2■■□□□ 1.94
CPSF7-208ENST00000450000 FTSJ3Q8IY81 847 aaKnown RBP27.19■■□□□ 1.94
CPSF7-208ENST00000450000 ZGPATQ8N5A5 531 aaKnown RBP27.19■■□□□ 1.94
CPSF7-208ENST00000450000 SSC5DA1L4H1 1573 aa27.18■■□□□ 1.94
CPSF7-208ENST00000450000 ECM29Q5VYK3 1845 aa27.18■■□□□ 1.94
CPSF7-208ENST00000450000 ELP3Q9H9T3 547 aa27.18■■□□□ 1.94
CPSF7-208ENST00000450000 GPR25O00155 361 aa27.17■■□□□ 1.94
CPSF7-208ENST00000450000 PHKA1P46020 1223 aa27.17■■□□□ 1.94
CPSF7-208ENST00000450000 MAP3K9P80192 1104 aa27.17■■□□□ 1.94
CPSF7-208ENST00000450000 G3BP1Q13283 466 aaKnown RBP eCLIP27.17■■□□□ 1.94
CPSF7-208ENST00000450000 GORABQ5T7V8 394 aa27.17■■□□□ 1.94
CPSF7-208ENST00000450000 APOBEC3HQ6NTF7 200 aaKnown RBP27.17■■□□□ 1.94
CPSF7-208ENST00000450000 ZNF296Q8WUU4 475 aaPredicted RBP27.17■■□□□ 1.94
CPSF7-208ENST00000450000 NEUROD6Q96NK8 337 aa27.17■■□□□ 1.94
CPSF7-208ENST00000450000 MTX1Q13505 466 aa27.16■■□□□ 1.94
CPSF7-208ENST00000450000 FKBP1CQ5VVH2 108 aa27.16■■□□□ 1.94
CPSF7-208ENST00000450000 CCDC102BQ68D86 513 aa27.16■■□□□ 1.94
CPSF7-208ENST00000450000 FAM83AQ86UY5 434 aa27.16■■□□□ 1.94
CPSF7-208ENST00000450000 TEPSINQ96N21 525 aa27.16■■□□□ 1.94
CPSF7-208ENST00000450000 TIMM10P62072 90 aa27.15■■□□□ 1.94
CPSF7-208ENST00000450000 TFCP2Q12800 502 aa27.15■■□□□ 1.94
CPSF7-208ENST00000450000 MVPQ14764 893 aaKnown RBP27.15■■□□□ 1.94
CPSF7-208ENST00000450000 IFNL1Q8IU54 200 aa27.15■■□□□ 1.94
CPSF7-208ENST00000450000 OPTNQ96CV9 577 aa27.15■■□□□ 1.94
CPSF7-208ENST00000450000 ARAP2Q8WZ64 1704 aa27.15■■□□□ 1.94
CPSF7-208ENST00000450000 A0A1B0GUL7 405 aa27.14■■□□□ 1.94
CPSF7-208ENST00000450000 FKTNO75072 461 aa27.14■■□□□ 1.94
CPSF7-208ENST00000450000 ADORA1P30542 326 aa27.14■■□□□ 1.94
CPSF7-208ENST00000450000 PKN2Q16513 984 aaKnown RBP27.14■■□□□ 1.94
CPSF7-208ENST00000450000 DCAF15Q66K64 600 aa27.14■■□□□ 1.94
CPSF7-208ENST00000450000 TMEM57Q8N5G2 664 aa27.14■■□□□ 1.94
CPSF7-208ENST00000450000 TNNQ9UQP3 1299 aa27.14■■□□□ 1.94
CPSF7-208ENST00000450000 PRDX5P30044 214 aa27.13■■□□□ 1.93
CPSF7-208ENST00000450000 DIXDC1Q155Q3 683 aa27.13■■□□□ 1.93
CPSF7-208ENST00000450000 DZIP1Q86YF9 867 aaKnown RBP27.13■■□□□ 1.93
CPSF7-208ENST00000450000 CDAN1Q8IWY9 1227 aa27.13■■□□□ 1.93
CPSF7-208ENST00000450000 SLF2Q8IX21 1173 aa27.13■■□□□ 1.93
CPSF7-208ENST00000450000 ABCF2Q9UG63 623 aa27.13■■□□□ 1.93
CPSF7-208ENST00000450000 NOM1Q5C9Z4 860 aaKnown RBP27.12■■□□□ 1.93
CPSF7-208ENST00000450000 SPTY2D1Q68D10 685 aaPredicted RBP27.12■■□□□ 1.93
CPSF7-208ENST00000450000 XAGE2Q96GT9 111 aa27.12■■□□□ 1.93
CPSF7-208ENST00000450000 DAGLAQ9Y4D2 1042 aa27.12■■□□□ 1.93
CPSF7-208ENST00000450000 SALL1Q9NSC2 1324 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms